RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 PRKCGP05129 697 aa21.65■■□□□ 1.06
TPM1-204ENST00000334895 HOXB2P14652 356 aa21.65■■□□□ 1.06
TPM1-204ENST00000334895 POM121L1PQ3SYA9 428 aa21.65■■□□□ 1.06
TPM1-204ENST00000334895 UBAP2Q5T6F2 1119 aaKnown RBP21.65■■□□□ 1.06
TPM1-204ENST00000334895 SDE2Q6IQ49 451 aa21.65■■□□□ 1.06
TPM1-204ENST00000334895 EMBQ6PCB8 327 aa21.65■■□□□ 1.06
TPM1-204ENST00000334895 PIP4K2CQ8TBX8 421 aa21.65■■□□□ 1.06
TPM1-204ENST00000334895 OSBPL1AQ9BXW6 950 aa21.65■■□□□ 1.06
TPM1-204ENST00000334895 ADGRE3Q9BY15 652 aa21.65■■□□□ 1.06
TPM1-204ENST00000334895 RSPH9Q9H1X1 276 aaPredicted RBP21.65■■□□□ 1.06
TPM1-204ENST00000334895 TEX264Q9Y6I9 313 aa21.65■■□□□ 1.06
TPM1-204ENST00000334895 FAM170BA6NMN3 283 aa21.64■■□□□ 1.05
TPM1-204ENST00000334895 EIF3HO15372 352 aaKnown RBP eCLIP21.64■■□□□ 1.05
TPM1-204ENST00000334895 SYNCRIPO60506 623 aaKnown RBP21.64■■□□□ 1.05
TPM1-204ENST00000334895 COPAP53621 1224 aa21.64■■□□□ 1.05
TPM1-204ENST00000334895 RPL26P61254 145 aaKnown RBP21.64■■□□□ 1.05
TPM1-204ENST00000334895 GAS6Q14393 721 aa21.64■■□□□ 1.05
TPM1-204ENST00000334895 HSF5Q4G112 596 aaPredicted RBP21.64■■□□□ 1.05
TPM1-204ENST00000334895 ZNF805Q5CZA5 627 aa21.64■■□□□ 1.05
TPM1-204ENST00000334895 DENND2CQ68D51 928 aa21.64■■□□□ 1.05
TPM1-204ENST00000334895 MMAAQ8IVH4 418 aaKnown RBP21.64■■□□□ 1.05
TPM1-204ENST00000334895 CAVIN3Q969G5 261 aa21.64■■□□□ 1.05
TPM1-204ENST00000334895 RMDN1Q96DB5 314 aa21.64■■□□□ 1.05
TPM1-204ENST00000334895 TRIM56Q9BRZ2 755 aaKnown RBP21.64■■□□□ 1.05
TPM1-204ENST00000334895 MMP17Q9ULZ9 603 aa21.64■■□□□ 1.05
TPM1-204ENST00000334895 RPL26L1Q9UNX3 145 aaKnown RBP21.64■■□□□ 1.05
TPM1-204ENST00000334895 SPO11Q9Y5K1 396 aa21.64■■□□□ 1.05
TPM1-204ENST00000334895 CPP00450 1065 aa21.63■■□□□ 1.05
TPM1-204ENST00000334895 PIRTP0C851 137 aa21.63■■□□□ 1.05
TPM1-204ENST00000334895 ELK3P41970 407 aa21.63■■□□□ 1.05
TPM1-204ENST00000334895 NPY2RP49146 381 aa21.63■■□□□ 1.05
TPM1-204ENST00000334895 DNAJC21Q5F1R6 531 aaKnown RBP21.63■■□□□ 1.05
TPM1-204ENST00000334895 FBXO38Q6PIJ6 1188 aa21.63■■□□□ 1.05
TPM1-204ENST00000334895 TMEM92Q6UXU6 159 aa21.63■■□□□ 1.05
TPM1-204ENST00000334895 RELL1Q8IUW5 271 aa21.63■■□□□ 1.05
TPM1-204ENST00000334895 ANKMY2Q8IV38 441 aa21.63■■□□□ 1.05
TPM1-204ENST00000334895 ZBED8Q8IZ13 594 aa21.63■■□□□ 1.05
TPM1-204ENST00000334895 SYNPOQ8N3V7 929 aa21.63■■□□□ 1.05
TPM1-204ENST00000334895 ARRDC3Q96B67 414 aa21.63■■□□□ 1.05
TPM1-204ENST00000334895 BFARQ9NZS9 450 aa21.63■■□□□ 1.05
TPM1-204ENST00000334895 DKK3Q9UBP4 350 aa21.63■■□□□ 1.05
TPM1-204ENST00000334895 SDR42E2A6NKP2 422 aa21.62■■□□□ 1.05
TPM1-204ENST00000334895 AP3B1O00203 1094 aa21.62■■□□□ 1.05
TPM1-204ENST00000334895 KPNA3O00505 521 aaPredicted RBP21.62■■□□□ 1.05
TPM1-204ENST00000334895 PDGFBP01127 241 aaPredicted RBP21.62■■□□□ 1.05
TPM1-204ENST00000334895 IL1BP01584 269 aa21.62■■□□□ 1.05
TPM1-204ENST00000334895 CTPS1P17812 591 aa21.62■■□□□ 1.05
TPM1-204ENST00000334895 MAGEA4P43358 317 aa21.62■■□□□ 1.05
TPM1-204ENST00000334895 TNNT3P45378 269 aaPredicted RBP21.62■■□□□ 1.05
TPM1-204ENST00000334895 GRIA4P48058 902 aa21.62■■□□□ 1.05
TPM1-204ENST00000334895 PSMD8P48556 350 aa21.62■■□□□ 1.05
TPM1-204ENST00000334895 LRRC32Q14392 662 aa21.62■■□□□ 1.05
TPM1-204ENST00000334895 STARD3Q14849 445 aa21.62■■□□□ 1.05
TPM1-204ENST00000334895 POU6F1Q14863 301 aa21.62■■□□□ 1.05
TPM1-204ENST00000334895 PARS2Q7L3T8 475 aaKnown RBP21.62■■□□□ 1.05
TPM1-204ENST00000334895 FBXO36Q8NEA4 188 aa21.62■■□□□ 1.05
TPM1-204ENST00000334895 OR2T3Q8NH03 318 aa21.62■■□□□ 1.05
TPM1-204ENST00000334895 C9orf72Q96LT7 481 aa21.62■■□□□ 1.05
TPM1-204ENST00000334895 NELL2Q99435 816 aa21.62■■□□□ 1.05
TPM1-204ENST00000334895 IL22Q9GZX6 179 aa21.62■■□□□ 1.05
TPM1-204ENST00000334895 MKRN2Q9H000 416 aaKnown RBP21.62■■□□□ 1.05
TPM1-204ENST00000334895 TSPYL1Q9H0U9 437 aa21.62■■□□□ 1.05
TPM1-204ENST00000334895 PLAC1Q9HBJ0 212 aa21.62■■□□□ 1.05
TPM1-204ENST00000334895 CHMP2BQ9UQN3 213 aa21.62■■□□□ 1.05
TPM1-204ENST00000334895 A0A0J9YYE9 177 aa21.62■■□□□ 1.05
TPM1-204ENST00000334895 FAM86C2PA6NEL3 165 aa21.62■■□□□ 1.05
TPM1-204ENST00000334895 TMEM221A6NGB7 291 aa21.62■■□□□ 1.05
TPM1-204ENST00000334895 M0R296 226 aa21.62■■□□□ 1.05
TPM1-204ENST00000334895 TRBC1P01850 177 aa21.62■■□□□ 1.05
TPM1-204ENST00000334895 ALPIP09923 528 aa21.62■■□□□ 1.05
TPM1-204ENST00000334895 TIMP2P16035 220 aa21.62■■□□□ 1.05
TPM1-204ENST00000334895 SATB1Q01826 763 aa21.62■■□□□ 1.05
TPM1-204ENST00000334895 CCDC38Q502W7 563 aa21.62■■□□□ 1.05
TPM1-204ENST00000334895 LRRC73Q5JTD7 316 aa21.62■■□□□ 1.05
TPM1-204ENST00000334895 EOGTQ5NDL2 527 aa21.62■■□□□ 1.05
TPM1-204ENST00000334895 BEND6Q5SZJ8 279 aaPredicted RBP21.62■■□□□ 1.05
TPM1-204ENST00000334895 BRAT1Q6PJG6 821 aa21.62■■□□□ 1.05
TPM1-204ENST00000334895 DSG4Q86SJ6 1040 aa21.62■■□□□ 1.05
TPM1-204ENST00000334895 HCAR2Q8TDS4 363 aa21.62■■□□□ 1.05
TPM1-204ENST00000334895 HNRNPLLQ8WVV9 542 aaKnown RBP21.62■■□□□ 1.05
TPM1-204ENST00000334895 CDC42EP4Q9H3Q1 356 aaKnown RBP21.62■■□□□ 1.05
TPM1-204ENST00000334895 SEMA4AQ9H3S1 761 aa21.62■■□□□ 1.05
TPM1-204ENST00000334895 C11orf16Q9NQ32 467 aa21.62■■□□□ 1.05
TPM1-204ENST00000334895 C2orf42Q9NWW7 574 aa21.62■■□□□ 1.05
TPM1-204ENST00000334895 PHTF1Q9UMS5 762 aa21.62■■□□□ 1.05
TPM1-204ENST00000334895 PPIL1Q9Y3C6 166 aa21.62■■□□□ 1.05
TPM1-204ENST00000334895 A0A0U1RQS6 177 aa21.61■■□□□ 1.05
TPM1-204ENST00000334895 C16orf96A6NNT2 1141 aa21.61■■□□□ 1.05
TPM1-204ENST00000334895 CHURC1-FNTBB4DL54 471 aa21.61■■□□□ 1.05
TPM1-204ENST00000334895 ITGB7P26010 798 aa21.61■■□□□ 1.05
TPM1-204ENST00000334895 EPHB1P54762 984 aa21.61■■□□□ 1.05
TPM1-204ENST00000334895 RPS14P62263 151 aaKnown RBP21.61■■□□□ 1.05
TPM1-204ENST00000334895 SLMAPQ14BN4 828 aa21.61■■□□□ 1.05
TPM1-204ENST00000334895 MAP9Q49MG5 647 aa21.61■■□□□ 1.05
TPM1-204ENST00000334895 CFAP58Q5T655 872 aa21.61■■□□□ 1.05
TPM1-204ENST00000334895 CACUL1Q86Y37 369 aa21.61■■□□□ 1.05
TPM1-204ENST00000334895 PJA1Q8NG27 643 aa21.61■■□□□ 1.05
TPM1-204ENST00000334895 BLOC1S5Q8TDH9 187 aa21.61■■□□□ 1.05
TPM1-204ENST00000334895 LRRC39Q96DD0 335 aa21.61■■□□□ 1.05
TPM1-204ENST00000334895 EBNA1BP2Q99848 306 aaKnown RBP21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms