RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 GALNT3Q14435 633 aa17.61■□□□□ 0.41
CHGA-202ENST00000334654 SIRPB2Q5JXA9 342 aa17.61■□□□□ 0.41
CHGA-202ENST00000334654 USP30Q70CQ3 517 aa17.61■□□□□ 0.41
CHGA-202ENST00000334654 ZNF534Q76KX8 674 aa17.61■□□□□ 0.41
CHGA-202ENST00000334654 HDDC3Q8N4P3 179 aa17.61■□□□□ 0.41
CHGA-202ENST00000334654 PPP1R16AQ96I34 528 aa17.61■□□□□ 0.41
CHGA-202ENST00000334654 TBL1YQ9BQ87 522 aa17.61■□□□□ 0.41
CHGA-202ENST00000334654 TPSD1Q9BZJ3 242 aa17.61■□□□□ 0.41
CHGA-202ENST00000334654 FBXL12Q9NXK8 326 aa17.61■□□□□ 0.41
CHGA-202ENST00000334654 GRHL1Q9NZI5 618 aa17.61■□□□□ 0.41
CHGA-202ENST00000334654 PHTF1Q9UMS5 762 aa17.61■□□□□ 0.41
CHGA-202ENST00000334654 RPL26L1Q9UNX3 145 aaKnown RBP17.61■□□□□ 0.41
CHGA-202ENST00000334654 LRRK1Q38SD2 2015 aa17.61■□□□□ 0.41
CHGA-202ENST00000334654 MYLKQ15746 1914 aa17.61■□□□□ 0.41
CHGA-202ENST00000334654 A0A1W2PQ67 120 aa17.6■□□□□ 0.41
CHGA-202ENST00000334654 PRR33A8MZF0 331 aa17.6■□□□□ 0.41
CHGA-202ENST00000334654 UPK3BL1B0FP48 263 aa17.6■□□□□ 0.41
CHGA-202ENST00000334654 UPK3BL2E5RIL1 263 aa17.6■□□□□ 0.41
CHGA-202ENST00000334654 AREL1O15033 823 aa17.6■□□□□ 0.41
CHGA-202ENST00000334654 LAMTOR5O43504 91 aa17.6■□□□□ 0.41
CHGA-202ENST00000334654 HEXIM1O94992 359 aaKnown RBP17.6■□□□□ 0.41
CHGA-202ENST00000334654 PRKCGP05129 697 aa17.6■□□□□ 0.41
CHGA-202ENST00000334654 ADRB3P13945 408 aa17.6■□□□□ 0.41
CHGA-202ENST00000334654 CA4P22748 312 aa17.6■□□□□ 0.41
CHGA-202ENST00000334654 NEK3P51956 506 aa17.6■□□□□ 0.41
CHGA-202ENST00000334654 DRG2P55039 364 aaKnown RBP17.6■□□□□ 0.41
CHGA-202ENST00000334654 CDK16Q00536 496 aa17.6■□□□□ 0.41
CHGA-202ENST00000334654 LRRC73Q5JTD7 316 aa17.6■□□□□ 0.41
CHGA-202ENST00000334654 TMEM31Q5JXX7 168 aa17.6■□□□□ 0.41
CHGA-202ENST00000334654 IZUMO3Q5VZ72 239 aa17.6■□□□□ 0.41
CHGA-202ENST00000334654 HIBCHQ6NVY1 386 aaPredicted RBP17.6■□□□□ 0.41
CHGA-202ENST00000334654 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.6■□□□□ 0.41
CHGA-202ENST00000334654 TTC7BQ86TV6 843 aa17.6■□□□□ 0.41
CHGA-202ENST00000334654 PPIL6Q8IXY8 311 aa17.6■□□□□ 0.41
CHGA-202ENST00000334654 PGBD3Q8N328 593 aa17.6■□□□□ 0.41
CHGA-202ENST00000334654 LPCAT1Q8NF37 534 aa17.6■□□□□ 0.41
CHGA-202ENST00000334654 IFT43Q96FT9 208 aa17.6■□□□□ 0.41
CHGA-202ENST00000334654 SCRN2Q96FV2 425 aa17.6■□□□□ 0.41
CHGA-202ENST00000334654 SNF8Q96H20 258 aa17.6■□□□□ 0.41
CHGA-202ENST00000334654 MCCC1Q96RQ3 725 aaPredicted RBP17.6■□□□□ 0.41
CHGA-202ENST00000334654 DPH5Q9H2P9 285 aa17.6■□□□□ 0.41
CHGA-202ENST00000334654 BCCIPQ9P287 314 aaKnown RBP eCLIP17.6■□□□□ 0.41
CHGA-202ENST00000334654 A0A0J9YYE9 177 aa17.59■□□□□ 0.41
CHGA-202ENST00000334654 GOLGA6CA6NDK9 693 aa17.59■□□□□ 0.41
CHGA-202ENST00000334654 GOLGA6BA6NDN3 693 aa17.59■□□□□ 0.41
CHGA-202ENST00000334654 C10orf142B7Z368 130 aa17.59■□□□□ 0.41
CHGA-202ENST00000334654 E7EVH7 732 aa17.59■□□□□ 0.41
CHGA-202ENST00000334654 RNASEH2AO75792 299 aaKnown RBP17.59■□□□□ 0.41
CHGA-202ENST00000334654 TRBC1P01850 177 aa17.59■□□□□ 0.41
CHGA-202ENST00000334654 ALPIP09923 528 aa17.59■□□□□ 0.41
CHGA-202ENST00000334654 GOLGA6DP0CG33 693 aa17.59■□□□□ 0.41
CHGA-202ENST00000334654 HLA-DPA1P20036 260 aa17.59■□□□□ 0.41
CHGA-202ENST00000334654 POLR2LP62875 67 aaKnown RBP17.59■□□□□ 0.41
CHGA-202ENST00000334654 NAPEPLDQ6IQ20 393 aa17.59■□□□□ 0.41
CHGA-202ENST00000334654 SLC25A41Q8N5S1 370 aa17.59■□□□□ 0.41
CHGA-202ENST00000334654 FRMD1Q8N878 549 aa17.59■□□□□ 0.41
CHGA-202ENST00000334654 MCUQ8NE86 351 aa17.59■□□□□ 0.41
CHGA-202ENST00000334654 OR52K1Q8NGK4 314 aa17.59■□□□□ 0.41
CHGA-202ENST00000334654 OMDQ99983 421 aa17.59■□□□□ 0.41
CHGA-202ENST00000334654 FSD1LQ9BXM9 530 aa17.59■□□□□ 0.41
CHGA-202ENST00000334654 ADGRE3Q9BY15 652 aa17.59■□□□□ 0.41
CHGA-202ENST00000334654 RAB17Q9H0T7 212 aa17.59■□□□□ 0.41
CHGA-202ENST00000334654 PCDH12Q9NPG4 1184 aa17.59■□□□□ 0.41
CHGA-202ENST00000334654 CASS4Q9NQ75 786 aa17.59■□□□□ 0.41
CHGA-202ENST00000334654 GOLGA6AQ9NYA3 693 aa17.59■□□□□ 0.41
CHGA-202ENST00000334654 WHRNQ9P202 907 aa17.59■□□□□ 0.41
CHGA-202ENST00000334654 GGT7Q9UJ14 662 aa17.59■□□□□ 0.41
CHGA-202ENST00000334654 UTP11Q9Y3A2 253 aaKnown RBP17.59■□□□□ 0.41
CHGA-202ENST00000334654 FADS3Q9Y5Q0 445 aa17.59■□□□□ 0.41
CHGA-202ENST00000334654 A0A0U1RQS6 177 aa17.58■□□□□ 0.41
CHGA-202ENST00000334654 ACADMP11310 421 aa17.58■□□□□ 0.41
CHGA-202ENST00000334654 CTPS1P17812 591 aa17.58■□□□□ 0.41
CHGA-202ENST00000334654 HNF1BP35680 557 aa17.58■□□□□ 0.41
CHGA-202ENST00000334654 GRIA4P48058 902 aa17.58■□□□□ 0.41
CHGA-202ENST00000334654 ITGA8P53708 1063 aa17.58■□□□□ 0.41
CHGA-202ENST00000334654 SEMG2Q02383 582 aa17.58■□□□□ 0.41
CHGA-202ENST00000334654 CDKN3Q16667 212 aa17.58■□□□□ 0.41
CHGA-202ENST00000334654 MAP7D1Q3KQU3 841 aa17.58■□□□□ 0.41
CHGA-202ENST00000334654 TTC31Q49AM3 519 aaPredicted RBP17.58■□□□□ 0.41
CHGA-202ENST00000334654 FBXL19Q6PCT2 694 aa17.58■□□□□ 0.41
CHGA-202ENST00000334654 KBTBD6Q86V97 674 aa17.58■□□□□ 0.41
CHGA-202ENST00000334654 CAND1Q86VP6 1230 aaKnown RBP17.58■□□□□ 0.41
CHGA-202ENST00000334654 HOOK3Q86VS8 718 aa17.58■□□□□ 0.41
CHGA-202ENST00000334654 RLN3Q8WXF3 142 aa17.58■□□□□ 0.41
CHGA-202ENST00000334654 NELL1Q92832 810 aa17.58■□□□□ 0.41
CHGA-202ENST00000334654 RMDN1Q96DB5 314 aa17.58■□□□□ 0.41
CHGA-202ENST00000334654 LYSMD1Q96S90 227 aa17.58■□□□□ 0.41
CHGA-202ENST00000334654 DYRK4Q9NR20 520 aa17.58■□□□□ 0.41
CHGA-202ENST00000334654 PIH1D1Q9NWS0 290 aaKnown RBP17.58■□□□□ 0.41
CHGA-202ENST00000334654 FZD4Q9ULV1 537 aa17.58■□□□□ 0.41
CHGA-202ENST00000334654 ITM2BQ9Y287 266 aa17.58■□□□□ 0.41
CHGA-202ENST00000334654 SPO11Q9Y5K1 396 aa17.58■□□□□ 0.41
CHGA-202ENST00000334654 TRPM6Q9BX84 2022 aa17.58■□□□□ 0.4
CHGA-202ENST00000334654 ABCA7Q8IZY2 2146 aa17.58■□□□□ 0.4
CHGA-202ENST00000334654 CCDC163A0A0D9SF12 145 aa17.57■□□□□ 0.4
CHGA-202ENST00000334654 ESYT3A0FGR9 886 aa17.57■□□□□ 0.4
CHGA-202ENST00000334654 NPIPB15A6NHN6 443 aaPredicted RBP17.57■□□□□ 0.4
CHGA-202ENST00000334654 AXIN1O15169 862 aa17.57■□□□□ 0.4
CHGA-202ENST00000334654 PLRG1O43660 514 aaKnown RBP17.57■□□□□ 0.4
CHGA-202ENST00000334654 AP1G1O43747 822 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms