RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 KLK7P49862 253 aa5.55□□□□□ -1.52
PTPRB-202ENST00000334414 CPT1AP50416 773 aa5.55□□□□□ -1.52
PTPRB-202ENST00000334414 GRM3Q14832 879 aa5.55□□□□□ -1.52
PTPRB-202ENST00000334414 CRY1Q16526 586 aa5.55□□□□□ -1.52
PTPRB-202ENST00000334414 KCTD19Q17RG1 926 aaPredicted RBP5.55□□□□□ -1.52
PTPRB-202ENST00000334414 SPESP1Q6UW49 350 aa5.55□□□□□ -1.52
PTPRB-202ENST00000334414 PTCHD4Q6ZW05 846 aa5.55□□□□□ -1.52
PTPRB-202ENST00000334414 ZNF467Q7Z7K2 595 aaPredicted RBP5.55□□□□□ -1.52
PTPRB-202ENST00000334414 FAM13CQ8NE31 585 aa5.55□□□□□ -1.52
PTPRB-202ENST00000334414 LENG9Q96B70 501 aa5.55□□□□□ -1.52
PTPRB-202ENST00000334414 SEMA3GQ9NS98 782 aa5.55□□□□□ -1.52
PTPRB-202ENST00000334414 DNAAF2Q9NVR5 837 aaKnown RBP5.55□□□□□ -1.52
PTPRB-202ENST00000334414 GNEQ9Y223 722 aaKnown RBP5.55□□□□□ -1.52
PTPRB-202ENST00000334414 FAM237AA0A1B0GTK4 181 aa5.55□□□□□ -1.52
PTPRB-202ENST00000334414 SLC19A2O60779 497 aa5.55□□□□□ -1.52
PTPRB-202ENST00000334414 DSG3P32926 999 aa5.55□□□□□ -1.52
PTPRB-202ENST00000334414 TAF13Q15543 124 aa5.55□□□□□ -1.52
PTPRB-202ENST00000334414 PLEKHN1Q494U1 663 aaPredicted RBP5.55□□□□□ -1.52
PTPRB-202ENST00000334414 AGMOQ6ZNB7 445 aa5.55□□□□□ -1.52
PTPRB-202ENST00000334414 ZNF571Q7Z3V5 609 aaPredicted RBP5.55□□□□□ -1.52
PTPRB-202ENST00000334414 PHACTR4Q8IZ21 702 aa5.55□□□□□ -1.52
PTPRB-202ENST00000334414 RASGEF1CQ8N431 466 aa5.55□□□□□ -1.52
PTPRB-202ENST00000334414 RDH12Q96NR8 316 aa5.55□□□□□ -1.52
PTPRB-202ENST00000334414 AP1S3Q96PC3 154 aa5.55□□□□□ -1.52
PTPRB-202ENST00000334414 TMEM168Q9H0V1 697 aa5.55□□□□□ -1.52
PTPRB-202ENST00000334414 ARMCX1Q9P291 453 aa5.55□□□□□ -1.52
PTPRB-202ENST00000334414 LOC102724428A0A0B4J2F2 783 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 NCF1BA6NI72 391 aaPredicted RBP5.54□□□□□ -1.52
PTPRB-202ENST00000334414 LRRC10BA6NIK2 292 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 NCF1CA8MVU1 366 aaPredicted RBP5.54□□□□□ -1.52
PTPRB-202ENST00000334414 FADS2P1A8MWK0 482 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 M0QYT0 321 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 NCF1P14598 390 aaPredicted RBP5.54□□□□□ -1.52
PTPRB-202ENST00000334414 SIK1P57059 783 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 TAS2R43P59537 309 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 GNA12Q03113 381 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 MPZL3Q6UWV2 235 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 CHRDL2Q6WN34 429 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 DEF8Q6ZN54 512 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 GET4Q7L5D6 327 aaPredicted RBP5.54□□□□□ -1.52
PTPRB-202ENST00000334414 KIF18BQ86Y91 864 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 CFAP206Q8IYR0 622 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 SLC9A6Q92581 669 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 SMARCD1Q96GM5 515 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 EBF2Q9HAK2 575 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 DPP3Q9NY33 737 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 SAMHD1Q9Y3Z3 626 aaKnown RBP5.54□□□□□ -1.52
PTPRB-202ENST00000334414 CYP3A7-CYP3A51PA0A087WV96 503 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 CLCA1A8K7I4 914 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 CCNT2O60583 730 aaKnown RBP5.54□□□□□ -1.52
PTPRB-202ENST00000334414 FGFR3P22607 806 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 CYP3A7P24462 503 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 ACSL1P33121 698 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 GRIA2P42262 883 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 PNLIPRP1P54315 467 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 GNG2P59768 71 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 SPIBQ01892 262 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 MAB21L1Q13394 359 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 COMMD2Q86X83 199 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 METTL6Q8TCB7 284 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 MTMR4Q9NYA4 1195 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 SH3BP1Q9Y3L3 701 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 CEMIPQ8WUJ3 1361 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 TADA2AO75478 443 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 GRAP2O75791 330 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 UGT2B4P06133 528 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 RRM1P23921 792 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 HNRNPH3P31942 346 aaKnown RBP5.54□□□□□ -1.52
PTPRB-202ENST00000334414 CRATP43155 626 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 MAPK12P53778 367 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 MFSD14CQ5VZR4 134 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 CERS2Q96G23 380 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 BARX2Q9UMQ3 279 aaPredicted RBP5.54□□□□□ -1.52
PTPRB-202ENST00000334414 KCNH4Q9UQ05 1017 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 POLR1DQ9Y2S0 133 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 SPATA31D1Q6ZQQ2 1576 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 FAM25EA8MYX2 175 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 ZBTB14O43829 449 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 ACSL4O60488 711 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 C9P02748 559 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 CDH5P33151 784 aaPredicted RBP5.54□□□□□ -1.52
PTPRB-202ENST00000334414 PGDP52209 483 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 ZNF484Q5JVG2 852 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 KDELC2Q7Z4H8 507 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 TRIM48Q8IWZ4 208 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 DENND6BQ8NEG7 585 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 STOML3Q8TAV4 291 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 C11orf24Q96F05 449 aaPredicted RBP5.54□□□□□ -1.52
PTPRB-202ENST00000334414 C1QTNF7Q9BXJ2 289 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 COPZ2Q9P299 210 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 ARHGAP20Q9P2F6 1191 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 FAM237BA0A1B0GVD1 139 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 DPPA5A6NC42 116 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 PCP4L1A6NKN8 68 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 ZNF432O94892 652 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 BMP7P18075 431 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 IGFBP5P24593 272 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 DPYSL3Q14195 570 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 TRAM1Q15629 374 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 RNF220Q5VTB9 566 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms