RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 A0A0G2JN53 185 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 FADS1O60427 444 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 RGS9O75916 674 aaPredicted RBP6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 ATP6V1B2P21281 511 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 MDH2P40926 338 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 DPYSQ14117 519 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 ZC3H14Q6PJT7 736 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 PALB2Q86YC2 1186 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 SFRP1Q8N474 314 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 ZNF713Q8N859 430 aaPredicted RBP6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 OR2L8Q8NGY9 312 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 MRPS31Q92665 395 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 STXBP5LQ9Y2K9 1186 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 MAU2Q9Y6X3 613 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 KDM2BQ8NHM5 1336 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 NPHP3-ACAD11A0A0J9YXS1 232 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 GTPBP1O00178 669 aaKnown RBP6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 DNPH1O43598 174 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 ZNF202O95125 648 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 DGKAP23743 735 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 FASP25445 335 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 CYP2J2P51589 502 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 IRAK1P51617 712 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 SLC26A5P58743 744 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 TMEM41BQ5BJD5 291 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 GPR107Q5VW38 600 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 SECISBP2Q96T21 854 aaKnown RBP6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 FRMD8Q9BZ67 464 aaPredicted RBP6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 MAGEB5Q9BZ81 275 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 ZNF408Q9H9D4 720 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 MRPL44Q9H9J2 332 aaKnown RBP6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 PRDM8Q9NQV8 689 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 XPNPEP1Q9NQW7 623 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 POLHQ9Y253 713 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 FAM205CA6NFA0 338 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 C5orf58C9J3I9 102 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 IFNA2P01563 188 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 CALCBP10092 127 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 IFI30P13284 250 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 ADSSP30520 456 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 RPS19P39019 145 aaKnown RBP6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 MAP3K8P41279 467 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 KLHL30Q0D2K2 578 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 RIN1Q13671 783 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 NEDD8Q15843 81 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 SYTL3Q4VX76 610 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 IFNLR1Q8IU57 520 aaPredicted RBP6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 AVL9Q8NBF6 648 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 ZNF439Q8NDP4 499 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 C16orf58Q96GQ5 468 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 OR8D2Q9GZM6 311 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 COPZ2Q9P299 210 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 ZNF230Q9UIE0 474 aaPredicted RBP6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 BBIP1A8MTZ0 92 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 B4E1Z4 1266 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 LRIG2O94898 1065 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 GRIA4P48058 902 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 INO80DQ53TQ3 878 aaPredicted RBP6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 TRIM46Q7Z4K8 759 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 C2CD5Q86YS7 1000 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 GALNT13Q8IUC8 556 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 GJD4Q96KN9 370 aaPredicted RBP6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 KLF6Q99612 283 aaPredicted RBP6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 SEMA4CQ9C0C4 833 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 ZDHHC6Q9H6R6 413 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 MGRN1O60291 552 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 FTCDO95954 541 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 PFKFB1P16118 471 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 UGT2B15P54855 530 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 HPCAP84074 193 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 ME3Q16798 604 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 HIST2H3PS2Q5TEC6 136 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 DCP1BQ8IZD4 617 aaKnown RBP6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 NR4A3Q92570 626 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 HLA-CQ95604 372 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 OR51E2Q9H255 320 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 PCDHGA5Q9Y5G8 931 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 A0A0B4J203 849 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 AGAP14A8MT82 685 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 LRRN2O75325 713 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 FTLP02792 175 aaPredicted RBP6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 ANXA8P13928 327 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 MC3RP41968 323 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 OXCT1P55809 520 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 ZNF280AP59817 542 aaPredicted RBP6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 PTPRNQ16849 979 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 ARHGAP15Q53QZ3 475 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 DCST2Q5T1A1 773 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 ANXA8L1Q5VT79 327 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 ALG1LQ6GMV1 187 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 ARSKQ6UWY0 536 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 SLC16A10Q8TF71 515 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 CCDC126Q96EE4 140 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 HNRNPABQ99729 332 aaKnown RBP6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 MKRN2Q9H000 416 aaKnown RBP6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 ALKBH4Q9NXW9 302 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 ACSL6Q9UKU0 697 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 ST3GAL5Q9UNP4 418 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 TRAF6Q9Y4K3 522 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 PRAG1Q86YV5 1406 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms