RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 NFKB1P19838 968 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 TCEAL6Q6IPX3 200 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 CENPNQ96H22 339 aaPredicted RBP10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 DNAJC1Q96KC8 554 aaKnown RBP10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 GRHL1Q9NZI5 618 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 AIREO43918 545 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 RPLP0P05388 317 aaKnown RBP10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 PLEKP08567 350 aaPredicted RBP10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 PIK3CBP42338 1070 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 PLEKHG4Q58EX7 1191 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 GLRA4Q5JXX5 417 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 ANO7Q6IWH7 933 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 KCTD8Q6ZWB6 473 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 FAM126BQ8IXS8 530 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 CNTD1Q8N815 330 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 PCDH19Q8TAB3 1148 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 MKL1Q969V6 931 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 CLPTM1LQ96KA5 538 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 SPATA33Q96N06 139 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 DPY30Q9C005 99 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 FETUBQ9UGM5 382 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 HMGXB4Q9UGU5 601 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 NPHP3-ACAD11A0A0J9YXS1 232 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 CAPN8A6NHC0 703 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 LSAMPQ13449 338 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 EZH2Q15910 746 aaKnown RBP10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 ZIK1Q3SY52 487 aaPredicted RBP10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 IQSEC1Q6DN90 963 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 FAM122CQ6P4D5 195 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 FITM2Q8N6M3 262 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 CLP1Q92989 425 aaKnown RBP10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 MIPEPQ99797 713 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 SAV1Q9H4B6 383 aaPredicted RBP10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 NEK6Q9HC98 313 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 GABBR1Q9UBS5 961 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 EFCAB9A8MZ26 197 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 RAD17O75943 681 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 PGRP06401 933 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 ACTR3P61158 418 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 SSX2Q16385 188 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 CCDC58Q4VC31 144 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 ZNF549Q6P9A3 640 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 PDSS2Q86YH6 399 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 HDAC2Q92769 488 aaKnown RBP10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 DIRAS2Q96HU8 199 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 PI4KBQ9UBF8 816 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 CHADO15335 359 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 DDX3YO15523 660 aaKnown RBP10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 CST8O60676 142 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 AP2S1P53680 142 aaPredicted RBP10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 TMEM132DQ14C87 1099 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 MED22Q15528 200 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 CHRDL2Q6WN34 429 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 RNF148Q8N7C7 305 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 SRFBP1Q8NEF9 429 aaKnown RBP10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 MTMR10Q9NXD2 777 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 MTRRQ9UBK8 725 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 ZNF232Q9UNY5 417 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 KCNIP3Q9Y2W7 256 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 BCKDKO14874 412 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 MFSD7Q6UXD7 560 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 DNAJC14Q6Y2X3 702 aaPredicted RBP10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 TBC1D16Q8TBP0 767 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 OXCT2Q9BYC2 517 aaPredicted RBP10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 PPA2Q9H2U2 334 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 OSGEPL1Q9H4B0 414 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 EBF3Q9H4W6 596 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 ZNF334Q9HCZ1 680 aaPredicted RBP10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 PPEF1O14829 653 aaPredicted RBP10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 ACADSBP45954 432 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 HECTD3Q5T447 861 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 ALKBH2Q6NS38 261 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 TRUB1Q8WWH5 349 aaKnown RBP10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 DYNLL2Q96FJ2 89 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 REXO5Q96IC2 774 aaKnown RBP10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 ACSL5Q9ULC5 683 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 DGKBQ9Y6T7 804 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 BTBD19C9JJ37 291 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 SLC33A1O00400 549 aaPredicted RBP10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 NR2F6P10588 404 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 PON1P27169 355 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 GRK5P34947 590 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 NADK2Q4G0N4 442 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 CDKL4Q5MAI5 379 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 DNAJB7Q7Z6W7 309 aaPredicted RBP10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 NT5DC3Q86UY8 548 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 HERC6Q8IVU3 1022 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 ARMC10Q8N2F6 343 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 TCEAL4Q96EI5 215 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 SSX3Q99909 188 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 BCL7BQ9BQE9 202 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 LRRC4BQ9NT99 713 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 TBC1D22BQ9NU19 505 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 UCKL1Q9NWZ5 548 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 PCDHA3Q9Y5H8 950 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 ASTN2O75129 1339 aaPredicted RBP10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 PLIN3O60664 434 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 MT-CO1P00395 513 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 IRAK1BP1Q5VVH5 260 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms