RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 LRRC73Q5JTD7 316 aa14.12□□□□□ -0.15
LIMS1-201ENST00000332345 CCDC181Q5TID7 509 aa14.12□□□□□ -0.15
LIMS1-201ENST00000332345 NDUFAF2Q8N183 169 aa14.12□□□□□ -0.15
LIMS1-201ENST00000332345 PDCD6IPQ8WUM4 868 aaKnown RBP14.12□□□□□ -0.15
LIMS1-201ENST00000332345 LRRN4Q8WUT4 740 aa14.12□□□□□ -0.15
LIMS1-201ENST00000332345 TFB1MQ8WVM0 346 aaKnown RBP14.12□□□□□ -0.15
LIMS1-201ENST00000332345 SPOCK2Q92563 424 aa14.12□□□□□ -0.15
LIMS1-201ENST00000332345 KLHDC7BQ96G42 594 aa14.12□□□□□ -0.15
LIMS1-201ENST00000332345 OLFM3Q96PB7 478 aa14.12□□□□□ -0.15
LIMS1-201ENST00000332345 HEMGNQ9BXL5 484 aa14.12□□□□□ -0.15
LIMS1-201ENST00000332345 GDF3Q9NR23 364 aa14.12□□□□□ -0.15
LIMS1-201ENST00000332345 PHTF1Q9UMS5 762 aa14.12□□□□□ -0.15
LIMS1-201ENST00000332345 ITM2BQ9Y287 266 aa14.12□□□□□ -0.15
LIMS1-201ENST00000332345 ATP8A1Q9Y2Q0 1164 aa14.12□□□□□ -0.15
LIMS1-201ENST00000332345 TTLL3Q9Y4R7 772 aa14.12□□□□□ -0.15
LIMS1-201ENST00000332345 A0A0U1RQJ8 604 aa14.11□□□□□ -0.15
LIMS1-201ENST00000332345 DCDC2BA2VCK2 349 aa14.11□□□□□ -0.15
LIMS1-201ENST00000332345 CFAP69A5D8W1 941 aa14.11□□□□□ -0.15
LIMS1-201ENST00000332345 KCNK1O00180 336 aa14.11□□□□□ -0.15
LIMS1-201ENST00000332345 MTSS1O43312 755 aa14.11□□□□□ -0.15
LIMS1-201ENST00000332345 WNT1P04628 370 aa14.11□□□□□ -0.15
LIMS1-201ENST00000332345 ZNF883P0CG24 379 aa14.11□□□□□ -0.15
LIMS1-201ENST00000332345 ITIH2P19823 946 aa14.11□□□□□ -0.15
LIMS1-201ENST00000332345 CA4P22748 312 aa14.11□□□□□ -0.15
LIMS1-201ENST00000332345 FAM193AP78312 1265 aa14.11□□□□□ -0.15
LIMS1-201ENST00000332345 IFI35P80217 286 aaPredicted RBP14.11□□□□□ -0.15
LIMS1-201ENST00000332345 SUZ12Q15022 739 aaKnown RBP14.11□□□□□ -0.15
LIMS1-201ENST00000332345 ARMC12Q5T9G4 340 aa14.11□□□□□ -0.15
LIMS1-201ENST00000332345 ALG1LQ6GMV1 187 aa14.11□□□□□ -0.15
LIMS1-201ENST00000332345 ZNF662Q6ZS27 426 aa14.11□□□□□ -0.15
LIMS1-201ENST00000332345 BBS12Q6ZW61 710 aa14.11□□□□□ -0.15
LIMS1-201ENST00000332345 DGLUCYQ7Z3D6 616 aa14.11□□□□□ -0.15
LIMS1-201ENST00000332345 DCP2Q8IU60 420 aaKnown RBP14.11□□□□□ -0.15
LIMS1-201ENST00000332345 TMEM145Q8NBT3 493 aa14.11□□□□□ -0.15
LIMS1-201ENST00000332345 OR2I1PQ8NGU4 316 aa14.11□□□□□ -0.15
LIMS1-201ENST00000332345 NSMCE3Q96MG7 304 aa14.11□□□□□ -0.15
LIMS1-201ENST00000332345 IL12RB2Q99665 862 aa14.11□□□□□ -0.15
LIMS1-201ENST00000332345 WRAP53Q9BUR4 548 aaKnown RBP14.11□□□□□ -0.15
LIMS1-201ENST00000332345 OSBPL8Q9BZF1 889 aa14.11□□□□□ -0.15
LIMS1-201ENST00000332345 SAE1Q9UBE0 346 aaPredicted RBP14.11□□□□□ -0.15
LIMS1-201ENST00000332345 GGT7Q9UJ14 662 aa14.11□□□□□ -0.15
LIMS1-201ENST00000332345 PCDHB9Q9Y5E1 797 aa14.11□□□□□ -0.15
LIMS1-201ENST00000332345 RAI2Q9Y5P3 530 aa14.11□□□□□ -0.15
LIMS1-201ENST00000332345 DCHS1Q96JQ0 3298 aa14.1□□□□□ -0.15
LIMS1-201ENST00000332345 PCNX2A6NKB5 2137 aa14.1□□□□□ -0.15
LIMS1-201ENST00000332345 HACD1B0YJ81 288 aa14.1□□□□□ -0.15
LIMS1-201ENST00000332345 APOC4-APOC2K7ER74 178 aa14.1□□□□□ -0.15
LIMS1-201ENST00000332345 FPGTO14772 594 aa14.1□□□□□ -0.15
LIMS1-201ENST00000332345 SPINT1O43278 529 aa14.1□□□□□ -0.15
LIMS1-201ENST00000332345 TJP3O95049 919 aa14.1□□□□□ -0.15
LIMS1-201ENST00000332345 FTCDO95954 541 aa14.1□□□□□ -0.15
LIMS1-201ENST00000332345 APOC2P02655 101 aa14.1□□□□□ -0.15
LIMS1-201ENST00000332345 PTMAP06454 111 aaKnown RBP14.1□□□□□ -0.15
LIMS1-201ENST00000332345 PYGMP11217 842 aa14.1□□□□□ -0.15
LIMS1-201ENST00000332345 PTPN7P35236 360 aa14.1□□□□□ -0.15
LIMS1-201ENST00000332345 CCZ1BP86790 482 aa14.1□□□□□ -0.15
LIMS1-201ENST00000332345 CCZ1P86791 482 aaPredicted RBP14.1□□□□□ -0.15
LIMS1-201ENST00000332345 ADCY2Q08462 1091 aa14.1□□□□□ -0.15
LIMS1-201ENST00000332345 FGL2Q14314 439 aa14.1□□□□□ -0.15
LIMS1-201ENST00000332345 ZNF423Q2M1K9 1284 aa14.1□□□□□ -0.15
LIMS1-201ENST00000332345 LAYNQ6UX15 382 aa14.1□□□□□ -0.15
LIMS1-201ENST00000332345 ZSWIM9Q86XI8 627 aa14.1□□□□□ -0.15
LIMS1-201ENST00000332345 OXR1Q8N573 874 aa14.1□□□□□ -0.15
LIMS1-201ENST00000332345 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.1□□□□□ -0.15
LIMS1-201ENST00000332345 DENND6BQ8NEG7 585 aa14.1□□□□□ -0.15
LIMS1-201ENST00000332345 MYOCQ99972 504 aa14.1□□□□□ -0.15
LIMS1-201ENST00000332345 FERMT1Q9BQL6 677 aa14.1□□□□□ -0.15
LIMS1-201ENST00000332345 SLC32A1Q9H598 525 aa14.1□□□□□ -0.15
LIMS1-201ENST00000332345 ERVMER34-1Q9H9K5 563 aa14.1□□□□□ -0.15
LIMS1-201ENST00000332345 FZD3Q9NPG1 666 aa14.1□□□□□ -0.15
LIMS1-201ENST00000332345 TM7SF3Q9NS93 570 aa14.1□□□□□ -0.15
LIMS1-201ENST00000332345 SEPT10Q9P0V9 454 aa14.1□□□□□ -0.15
LIMS1-201ENST00000332345 PCDHGB2Q9Y5G2 931 aa14.1□□□□□ -0.15
LIMS1-201ENST00000332345 A6NNZ2 444 aa14.09□□□□□ -0.15
LIMS1-201ENST00000332345 KCNK3O14649 394 aa14.09□□□□□ -0.15
LIMS1-201ENST00000332345 LZTS3O60299 673 aaPredicted RBP14.09□□□□□ -0.15
LIMS1-201ENST00000332345 PGLSO95336 258 aa14.09□□□□□ -0.15
LIMS1-201ENST00000332345 CPP00450 1065 aa14.09□□□□□ -0.15
LIMS1-201ENST00000332345 HLA-DQB2P05538 268 aa14.09□□□□□ -0.15
LIMS1-201ENST00000332345 THEGLP0DJG4 465 aa14.09□□□□□ -0.15
LIMS1-201ENST00000332345 CYP2A6P11509 494 aaPredicted RBP14.09□□□□□ -0.15
LIMS1-201ENST00000332345 PECAM1P16284 738 aaPredicted RBP14.09□□□□□ -0.15
LIMS1-201ENST00000332345 CSRP1P21291 193 aaKnown RBP14.09□□□□□ -0.15
LIMS1-201ENST00000332345 MMP12P39900 470 aa14.09□□□□□ -0.15
LIMS1-201ENST00000332345 ARRB1P49407 418 aaPredicted RBP14.09□□□□□ -0.15
LIMS1-201ENST00000332345 LIG3P49916 1009 aa14.09□□□□□ -0.15
LIMS1-201ENST00000332345 EPHB1P54762 984 aa14.09□□□□□ -0.15
LIMS1-201ENST00000332345 NXPH1P58417 271 aa14.09□□□□□ -0.15
LIMS1-201ENST00000332345 DSC2Q02487 901 aa14.09□□□□□ -0.15
LIMS1-201ENST00000332345 TRAF2Q12933 501 aa14.09□□□□□ -0.15
LIMS1-201ENST00000332345 XRCC4Q13426 336 aa14.09□□□□□ -0.15
LIMS1-201ENST00000332345 TEX44Q53QW1 395 aa14.09□□□□□ -0.15
LIMS1-201ENST00000332345 Q6ZSR6 202 aa14.09□□□□□ -0.15
LIMS1-201ENST00000332345 ABI3BPQ7Z7G0 1075 aa14.09□□□□□ -0.15
LIMS1-201ENST00000332345 ZC3H18Q86VM9 953 aaKnown RBP14.09□□□□□ -0.15
LIMS1-201ENST00000332345 CNTD1Q8N815 330 aa14.09□□□□□ -0.15
LIMS1-201ENST00000332345 ARRDC2Q8TBH0 407 aa14.09□□□□□ -0.15
LIMS1-201ENST00000332345 ALG3Q92685 438 aa14.09□□□□□ -0.15
LIMS1-201ENST00000332345 CENPTQ96BT3 561 aa14.09□□□□□ -0.15
LIMS1-201ENST00000332345 SCRN2Q96FV2 425 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms