RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 APCDD1Q8J025 514 aa17.06■□□□□ 0.32
DDX41-201ENST00000330503 OR6Y1Q8NGX8 325 aa17.06■□□□□ 0.32
DDX41-201ENST00000330503 OR6P1Q8NGX9 317 aa17.06■□□□□ 0.32
DDX41-201ENST00000330503 CALML6Q8TD86 181 aa17.06■□□□□ 0.32
DDX41-201ENST00000330503 TCEAL4Q96EI5 215 aa17.06■□□□□ 0.32
DDX41-201ENST00000330503 DNAJC1Q96KC8 554 aaKnown RBP17.06■□□□□ 0.32
DDX41-201ENST00000330503 SMIM14Q96QK8 99 aa17.06■□□□□ 0.32
DDX41-201ENST00000330503 OMDQ99983 421 aa17.06■□□□□ 0.32
DDX41-201ENST00000330503 TLK1Q9UKI8 766 aa17.06■□□□□ 0.32
DDX41-201ENST00000330503 SH3BP1Q9Y3L3 701 aa17.06■□□□□ 0.32
DDX41-201ENST00000330503 PCDHGC4Q9Y5F7 938 aa17.06■□□□□ 0.32
DDX41-201ENST00000330503 RAI2Q9Y5P3 530 aa17.06■□□□□ 0.32
DDX41-201ENST00000330503 CAPN7Q9Y6W3 813 aa17.06■□□□□ 0.32
DDX41-201ENST00000330503 BPTFQ12830 3046 aa17.06■□□□□ 0.32
DDX41-201ENST00000330503 S1PR4O95977 384 aa17.05■□□□□ 0.32
DDX41-201ENST00000330503 ZNF460Q14592 562 aa17.05■□□□□ 0.32
DDX41-201ENST00000330503 RBM20Q5T481 1227 aaKnown RBP17.05■□□□□ 0.32
DDX41-201ENST00000330503 NCEH1Q6PIU2 408 aa17.05■□□□□ 0.32
DDX41-201ENST00000330503 CILP2Q8IUL8 1156 aa17.05■□□□□ 0.32
DDX41-201ENST00000330503 CENPLQ8N0S6 344 aaPredicted RBP17.05■□□□□ 0.32
DDX41-201ENST00000330503 DDI1Q8WTU0 396 aa17.05■□□□□ 0.32
DDX41-201ENST00000330503 ELMO2Q96JJ3 720 aa17.05■□□□□ 0.32
DDX41-201ENST00000330503 TDRD1Q9BXT4 1180 aaKnown RBP17.05■□□□□ 0.32
DDX41-201ENST00000330503 NMRAL1Q9HBL8 299 aa17.05■□□□□ 0.32
DDX41-201ENST00000330503 TLR9Q9NR96 1032 aa17.05■□□□□ 0.32
DDX41-201ENST00000330503 THAP1Q9NVV9 213 aa17.05■□□□□ 0.32
DDX41-201ENST00000330503 RIMKLBQ9ULI2 386 aa17.05■□□□□ 0.32
DDX41-201ENST00000330503 ARIH1Q9Y4X5 557 aaPredicted RBP17.05■□□□□ 0.32
DDX41-201ENST00000330503 A0A0G2JND7 137 aa17.05■□□□□ 0.32
DDX41-201ENST00000330503 TYW5A2RUC4 315 aaKnown RBP17.05■□□□□ 0.32
DDX41-201ENST00000330503 SBK3P0C264 359 aa17.05■□□□□ 0.32
DDX41-201ENST00000330503 IRS1P35568 1242 aa17.05■□□□□ 0.32
DDX41-201ENST00000330503 ARFIP2P53365 341 aa17.05■□□□□ 0.32
DDX41-201ENST00000330503 EPHA5P54756 1037 aa17.05■□□□□ 0.32
DDX41-201ENST00000330503 RAB10P61026 200 aa17.05■□□□□ 0.32
DDX41-201ENST00000330503 NSUN2Q08J23 767 aaKnown RBP eCLIP17.05■□□□□ 0.32
DDX41-201ENST00000330503 SLC12A1Q13621 1099 aa17.05■□□□□ 0.32
DDX41-201ENST00000330503 CDH18Q13634 790 aa17.05■□□□□ 0.32
DDX41-201ENST00000330503 GALNT7Q86SF2 657 aa17.05■□□□□ 0.32
DDX41-201ENST00000330503 LDB1Q86U70 411 aaPredicted RBP17.05■□□□□ 0.32
DDX41-201ENST00000330503 SPNS2Q8IVW8 549 aa17.05■□□□□ 0.32
DDX41-201ENST00000330503 MFN1Q8IWA4 741 aa17.05■□□□□ 0.32
DDX41-201ENST00000330503 GBP7Q8N8V2 638 aaPredicted RBP17.05■□□□□ 0.32
DDX41-201ENST00000330503 OR13C4Q8NGS5 318 aa17.05■□□□□ 0.32
DDX41-201ENST00000330503 PEX13Q92968 403 aa17.05■□□□□ 0.32
DDX41-201ENST00000330503 GPR78Q96P69 363 aa17.05■□□□□ 0.32
DDX41-201ENST00000330503 GCNAQ96QF7 691 aa17.05■□□□□ 0.32
DDX41-201ENST00000330503 PLK2Q9NYY3 685 aa17.05■□□□□ 0.32
DDX41-201ENST00000330503 RUVBL2Q9Y230 463 aaKnown RBP17.05■□□□□ 0.32
DDX41-201ENST00000330503 CCL26Q9Y258 94 aa17.05■□□□□ 0.32
DDX41-201ENST00000330503 CCDC162PA2VCL2 907 aa17.04■□□□□ 0.32
DDX41-201ENST00000330503 K7ERQ8 282 aa17.04■□□□□ 0.32
DDX41-201ENST00000330503 LYPLA1O75608 230 aaPredicted RBP17.04■□□□□ 0.32
DDX41-201ENST00000330503 PFKLP17858 780 aa17.04■□□□□ 0.32
DDX41-201ENST00000330503 ARRB2P32121 409 aa17.04■□□□□ 0.32
DDX41-201ENST00000330503 TRAF2Q12933 501 aa17.04■□□□□ 0.32
DDX41-201ENST00000330503 DLG1Q12959 904 aa17.04■□□□□ 0.32
DDX41-201ENST00000330503 LAMB3Q13751 1172 aa17.04■□□□□ 0.32
DDX41-201ENST00000330503 TPGS1Q6ZTW0 290 aa17.04■□□□□ 0.32
DDX41-201ENST00000330503 MICALL1Q8N3F8 863 aa17.04■□□□□ 0.32
DDX41-201ENST00000330503 GPATCH11Q8N954 259 aa17.04■□□□□ 0.32
DDX41-201ENST00000330503 RIN3Q8TB24 985 aa17.04■□□□□ 0.32
DDX41-201ENST00000330503 KCTD4Q8WVF5 259 aa17.04■□□□□ 0.32
DDX41-201ENST00000330503 LRRC37BQ96QE4 947 aa17.04■□□□□ 0.32
DDX41-201ENST00000330503 TMEM120AQ9BXJ8 343 aa17.04■□□□□ 0.32
DDX41-201ENST00000330503 ARHGAP26Q9UNA1 814 aa17.04■□□□□ 0.32
DDX41-201ENST00000330503 ACOT9Q9Y305 439 aa17.04■□□□□ 0.32
DDX41-201ENST00000330503 FCF1Q9Y324 198 aaKnown RBP17.04■□□□□ 0.32
DDX41-201ENST00000330503 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.03■□□□□ 0.32
DDX41-201ENST00000330503 GRM6O15303 877 aa17.03■□□□□ 0.32
DDX41-201ENST00000330503 DNAJC6O75061 913 aa17.03■□□□□ 0.32
DDX41-201ENST00000330503 DCTN3O75935 186 aa17.03■□□□□ 0.32
DDX41-201ENST00000330503 DNAJC8O75937 253 aaPredicted RBP17.03■□□□□ 0.32
DDX41-201ENST00000330503 GOT2P00505 430 aaKnown RBP17.03■□□□□ 0.32
DDX41-201ENST00000330503 SERPINE1P05121 402 aa17.03■□□□□ 0.32
DDX41-201ENST00000330503 COL6A2P12110 1019 aa17.03■□□□□ 0.32
DDX41-201ENST00000330503 MYOGP15173 224 aa17.03■□□□□ 0.32
DDX41-201ENST00000330503 STMN1P16949 149 aa17.03■□□□□ 0.32
DDX41-201ENST00000330503 CRABP2P29373 138 aa17.03■□□□□ 0.32
DDX41-201ENST00000330503 SLC1A6P48664 564 aa17.03■□□□□ 0.32
DDX41-201ENST00000330503 PRAMEP78395 509 aa17.03■□□□□ 0.32
DDX41-201ENST00000330503 POU4F1Q01851 419 aa17.03■□□□□ 0.32
DDX41-201ENST00000330503 MPPE1Q53F39 396 aa17.03■□□□□ 0.32
DDX41-201ENST00000330503 MPP7Q5T2T1 576 aa17.03■□□□□ 0.32
DDX41-201ENST00000330503 GPR158Q5T848 1215 aa17.03■□□□□ 0.32
DDX41-201ENST00000330503 MDGA1Q8NFP4 955 aa17.03■□□□□ 0.32
DDX41-201ENST00000330503 PPP1R14CQ8TAE6 165 aa17.03■□□□□ 0.32
DDX41-201ENST00000330503 STYXQ8WUJ0 223 aa17.03■□□□□ 0.32
DDX41-201ENST00000330503 RMDN1Q96DB5 314 aa17.03■□□□□ 0.32
DDX41-201ENST00000330503 OLFM1Q99784 485 aa17.03■□□□□ 0.32
DDX41-201ENST00000330503 MAN1C1Q9NR34 630 aa17.03■□□□□ 0.32
DDX41-201ENST00000330503 RPP40O75818 363 aaKnown RBP17.03■□□□□ 0.32
DDX41-201ENST00000330503 RALBP11234 206 aa17.03■□□□□ 0.32
DDX41-201ENST00000330503 PSMA3P25788 255 aa17.03■□□□□ 0.32
DDX41-201ENST00000330503 ZNF140P52738 457 aaPredicted RBP17.03■□□□□ 0.32
DDX41-201ENST00000330503 NCALDP61601 193 aa17.03■□□□□ 0.32
DDX41-201ENST00000330503 LMAN2Q12907 356 aa17.03■□□□□ 0.32
DDX41-201ENST00000330503 SETDB1Q15047 1291 aa17.03■□□□□ 0.32
DDX41-201ENST00000330503 TAF1BQ53T94 588 aaPredicted RBP17.03■□□□□ 0.32
DDX41-201ENST00000330503 MTDHQ86UE4 582 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms