RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 RNF111Q6ZNA4 994 aa14.65□□□□□ -0.06
TPM3-206ENST00000330188 RNF135Q8IUD6 432 aa14.65□□□□□ -0.06
TPM3-206ENST00000330188 RP9Q8TA86 221 aaKnown RBP14.65□□□□□ -0.06
TPM3-206ENST00000330188 SLC26A7Q8TE54 656 aa14.65□□□□□ -0.06
TPM3-206ENST00000330188 UCMAQ8WVF2 138 aa14.65□□□□□ -0.06
TPM3-206ENST00000330188 HDAC10Q969S8 669 aa14.65□□□□□ -0.06
TPM3-206ENST00000330188 TSPAN17Q96FV3 270 aa14.65□□□□□ -0.06
TPM3-206ENST00000330188 MAELQ96JY0 434 aaKnown RBP14.65□□□□□ -0.06
TPM3-206ENST00000330188 MARCH5Q9NX47 278 aa14.65□□□□□ -0.06
TPM3-206ENST00000330188 CORO1CQ9ULV4 474 aaPredicted RBP14.65□□□□□ -0.06
TPM3-206ENST00000330188 HTTP42858 3142 aa14.65□□□□□ -0.06
TPM3-206ENST00000330188 A8MT66 165 aa14.65□□□□□ -0.06
TPM3-206ENST00000330188 SDHDO14521 159 aa14.65□□□□□ -0.06
TPM3-206ENST00000330188 AIM2O14862 343 aa14.65□□□□□ -0.06
TPM3-206ENST00000330188 LDB2O43679 373 aa14.65□□□□□ -0.06
TPM3-206ENST00000330188 GJB3O75712 270 aa14.65□□□□□ -0.06
TPM3-206ENST00000330188 WISP3O95389 354 aaPredicted RBP14.65□□□□□ -0.06
TPM3-206ENST00000330188 S1PR4O95977 384 aa14.65□□□□□ -0.06
TPM3-206ENST00000330188 CCDC166P0CW27 439 aa14.65□□□□□ -0.06
TPM3-206ENST00000330188 COL6A1P12109 1028 aa14.65□□□□□ -0.06
TPM3-206ENST00000330188 GATMP50440 423 aa14.65□□□□□ -0.06
TPM3-206ENST00000330188 NUDT2P50583 147 aa14.65□□□□□ -0.06
TPM3-206ENST00000330188 RING1Q06587 406 aa14.65□□□□□ -0.06
TPM3-206ENST00000330188 CYLC2Q14093 348 aaPredicted RBP14.65□□□□□ -0.06
TPM3-206ENST00000330188 RNF19BQ6ZMZ0 732 aa14.65□□□□□ -0.06
TPM3-206ENST00000330188 SETD3Q86TU7 594 aaPredicted RBP14.65□□□□□ -0.06
TPM3-206ENST00000330188 LDB1Q86U70 411 aaPredicted RBP14.65□□□□□ -0.06
TPM3-206ENST00000330188 SLC43A3Q8NBI5 491 aa14.65□□□□□ -0.06
TPM3-206ENST00000330188 OR6P1Q8NGX9 317 aa14.65□□□□□ -0.06
TPM3-206ENST00000330188 SPPL2BQ8TCT7 592 aa14.65□□□□□ -0.06
TPM3-206ENST00000330188 ANKRD49Q8WVL7 239 aa14.65□□□□□ -0.06
TPM3-206ENST00000330188 SPATA17Q96L03 361 aa14.65□□□□□ -0.06
TPM3-206ENST00000330188 UBXN10Q96LJ8 280 aa14.65□□□□□ -0.06
TPM3-206ENST00000330188 SEPT5Q99719 369 aaPredicted RBP14.65□□□□□ -0.06
TPM3-206ENST00000330188 CCSER2Q9H7U1 834 aa14.65□□□□□ -0.06
TPM3-206ENST00000330188 MARCH4Q9P2E8 410 aaPredicted RBP14.65□□□□□ -0.06
TPM3-206ENST00000330188 KCTD3Q9Y597 815 aa14.65□□□□□ -0.06
TPM3-206ENST00000330188 CHD5Q8TDI0 1954 aa14.64□□□□□ -0.07
TPM3-206ENST00000330188 OR51F1A6NGY5 319 aa14.64□□□□□ -0.07
TPM3-206ENST00000330188 MUSKO15146 869 aa14.64□□□□□ -0.07
TPM3-206ENST00000330188 HNRNPLP14866 589 aaKnown RBP eCLIP14.64□□□□□ -0.07
TPM3-206ENST00000330188 OR1E1P30953 314 aa14.64□□□□□ -0.07
TPM3-206ENST00000330188 PBX3P40426 434 aa14.64□□□□□ -0.07
TPM3-206ENST00000330188 MAPKAPK2P49137 400 aa14.64□□□□□ -0.07
TPM3-206ENST00000330188 YBEYP58557 167 aaPredicted RBP14.64□□□□□ -0.07
TPM3-206ENST00000330188 PRAMEP78395 509 aa14.64□□□□□ -0.07
TPM3-206ENST00000330188 DSG1Q02413 1049 aa14.64□□□□□ -0.07
TPM3-206ENST00000330188 SP3Q02447 781 aa14.64□□□□□ -0.07
TPM3-206ENST00000330188 GPR17Q13304 367 aa14.64□□□□□ -0.07
TPM3-206ENST00000330188 HERC3Q15034 1050 aa14.64□□□□□ -0.07
TPM3-206ENST00000330188 KLC3Q6P597 504 aa14.64□□□□□ -0.07
TPM3-206ENST00000330188 C16orf89Q6UX73 402 aa14.64□□□□□ -0.07
TPM3-206ENST00000330188 IZUMO2Q6UXV1 221 aa14.64□□□□□ -0.07
TPM3-206ENST00000330188 DHDDSQ86SQ9 333 aa14.64□□□□□ -0.07
TPM3-206ENST00000330188 MARK4Q96L34 752 aa14.64□□□□□ -0.07
TPM3-206ENST00000330188 CASD1Q96PB1 797 aa14.64□□□□□ -0.07
TPM3-206ENST00000330188 SEMA3CQ99985 751 aa14.64□□□□□ -0.07
TPM3-206ENST00000330188 ECSITQ9BQ95 431 aa14.64□□□□□ -0.07
TPM3-206ENST00000330188 ZBTB26Q9HCK0 441 aa14.64□□□□□ -0.07
TPM3-206ENST00000330188 CYP4F12Q9HCS2 524 aa14.64□□□□□ -0.07
TPM3-206ENST00000330188 GTSE1Q9NYZ3 720 aa14.64□□□□□ -0.07
TPM3-206ENST00000330188 HCSTQ9UBK5 93 aa14.64□□□□□ -0.07
TPM3-206ENST00000330188 PRPF19Q9UMS4 504 aaKnown RBP14.64□□□□□ -0.07
TPM3-206ENST00000330188 VWA7Q9Y334 891 aa14.64□□□□□ -0.07
TPM3-206ENST00000330188 A0A1W2PQ45 241 aaPredicted RBP14.63□□□□□ -0.07
TPM3-206ENST00000330188 A0A1W2PQY0 241 aa14.63□□□□□ -0.07
TPM3-206ENST00000330188 TRPC5OSA6NMA1 111 aa14.63□□□□□ -0.07
TPM3-206ENST00000330188 TBC1D4O60343 1298 aa14.63□□□□□ -0.07
TPM3-206ENST00000330188 PRAMEF11O60813 436 aa14.63□□□□□ -0.07
TPM3-206ENST00000330188 IPO13O94829 963 aaKnown RBP14.63□□□□□ -0.07
TPM3-206ENST00000330188 ZDHHC11BP0C7U3 371 aa14.63□□□□□ -0.07
TPM3-206ENST00000330188 TACR2P21452 398 aa14.63□□□□□ -0.07
TPM3-206ENST00000330188 CDKN2DP55273 166 aa14.63□□□□□ -0.07
TPM3-206ENST00000330188 ACVR1Q04771 509 aa14.63□□□□□ -0.07
TPM3-206ENST00000330188 SULT2A1Q06520 285 aa14.63□□□□□ -0.07
TPM3-206ENST00000330188 CDC16Q13042 620 aa14.63□□□□□ -0.07
TPM3-206ENST00000330188 ACAP2Q15057 778 aa14.63□□□□□ -0.07
TPM3-206ENST00000330188 ACBD5Q5T8D3 534 aaPredicted RBP14.63□□□□□ -0.07
TPM3-206ENST00000330188 TMEM207Q6UWW9 146 aa14.63□□□□□ -0.07
TPM3-206ENST00000330188 ABI1Q8IZP0 508 aa14.63□□□□□ -0.07
TPM3-206ENST00000330188 DSELQ8IZU8 1212 aa14.63□□□□□ -0.07
TPM3-206ENST00000330188 KYQ8NBH2 561 aa14.63□□□□□ -0.07
TPM3-206ENST00000330188 RCN3Q96D15 328 aa14.63□□□□□ -0.07
TPM3-206ENST00000330188 CCDC126Q96EE4 140 aa14.63□□□□□ -0.07
TPM3-206ENST00000330188 POLR1EQ9GZS1 481 aaKnown RBP14.63□□□□□ -0.07
TPM3-206ENST00000330188 ELAC1Q9H777 363 aaKnown RBP14.63□□□□□ -0.07
TPM3-206ENST00000330188 PDFQ9HBH1 243 aa14.63□□□□□ -0.07
TPM3-206ENST00000330188 COPG1Q9Y678 874 aaKnown RBP14.63□□□□□ -0.07
TPM3-206ENST00000330188 TLR5O60602 858 aa14.63□□□□□ -0.07
TPM3-206ENST00000330188 RBP1P09455 135 aa14.63□□□□□ -0.07
TPM3-206ENST00000330188 SP100P23497 879 aaPredicted RBP14.63□□□□□ -0.07
TPM3-206ENST00000330188 SLC11A1P49279 550 aa14.63□□□□□ -0.07
TPM3-206ENST00000330188 SATB1Q01826 763 aa14.63□□□□□ -0.07
TPM3-206ENST00000330188 FUT10Q6P4F1 479 aa14.63□□□□□ -0.07
TPM3-206ENST00000330188 LRRC8DQ7L1W4 858 aa14.63□□□□□ -0.07
TPM3-206ENST00000330188 SUDS3Q9H7L9 328 aaPredicted RBP14.63□□□□□ -0.07
TPM3-206ENST00000330188 TNFRSF12AQ9NP84 129 aa14.63□□□□□ -0.07
TPM3-206ENST00000330188 COMMD8Q9NX08 183 aa14.63□□□□□ -0.07
TPM3-206ENST00000330188 SRRDQ9UH36 339 aa14.63□□□□□ -0.07
TPM3-206ENST00000330188 ADAMTS6Q9UKP5 1117 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms