RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 ACBD6Q9BR61 282 aa15.46■□□□□ 0.07
BRCC3-201ENST00000330045 KATNAL1Q9BW62 490 aa15.46■□□□□ 0.07
BRCC3-201ENST00000330045 UNC93B1Q9H1C4 597 aa15.46■□□□□ 0.07
BRCC3-201ENST00000330045 ETAA1Q9NY74 926 aa15.46■□□□□ 0.07
BRCC3-201ENST00000330045 CNOT11Q9UKZ1 510 aaKnown RBP15.46■□□□□ 0.07
BRCC3-201ENST00000330045 ST3GAL5Q9UNP4 418 aa15.46■□□□□ 0.07
BRCC3-201ENST00000330045 PSMD12O00232 456 aaPredicted RBP15.46■□□□□ 0.07
BRCC3-201ENST00000330045 LTA4HP09960 611 aaKnown RBP15.46■□□□□ 0.07
BRCC3-201ENST00000330045 FAM58BPP0C7Q3 252 aa15.46■□□□□ 0.07
BRCC3-201ENST00000330045 ODC1P11926 461 aa15.46■□□□□ 0.07
BRCC3-201ENST00000330045 HOXC8P31273 242 aa15.46■□□□□ 0.07
BRCC3-201ENST00000330045 CCR1P32246 355 aa15.46■□□□□ 0.07
BRCC3-201ENST00000330045 RPL9P32969 192 aaKnown RBP15.46■□□□□ 0.07
BRCC3-201ENST00000330045 C1QTNF8P60827 252 aa15.46■□□□□ 0.07
BRCC3-201ENST00000330045 IRF5Q13568 498 aa15.46■□□□□ 0.07
BRCC3-201ENST00000330045 LRP8Q14114 963 aa15.46■□□□□ 0.07
BRCC3-201ENST00000330045 FASTKQ14296 549 aaKnown RBP15.46■□□□□ 0.07
BRCC3-201ENST00000330045 PSMD5Q16401 504 aa15.46■□□□□ 0.07
BRCC3-201ENST00000330045 PCSK7Q16549 785 aa15.46■□□□□ 0.07
BRCC3-201ENST00000330045 UPP1Q16831 310 aa15.46■□□□□ 0.07
BRCC3-201ENST00000330045 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.46■□□□□ 0.07
BRCC3-201ENST00000330045 KLC3Q6P597 504 aa15.46■□□□□ 0.07
BRCC3-201ENST00000330045 IYDQ6PHW0 289 aa15.46■□□□□ 0.07
BRCC3-201ENST00000330045 RPS27LQ71UM5 84 aaKnown RBP15.46■□□□□ 0.07
BRCC3-201ENST00000330045 CUZD1Q86UP6 607 aa15.46■□□□□ 0.07
BRCC3-201ENST00000330045 ZFRQ96KR1 1074 aaKnown RBP15.46■□□□□ 0.07
BRCC3-201ENST00000330045 ZCWPW1Q9H0M4 648 aa15.46■□□□□ 0.07
BRCC3-201ENST00000330045 TNFRSF12AQ9NP84 129 aa15.46■□□□□ 0.07
BRCC3-201ENST00000330045 TBC1D13Q9NVG8 400 aa15.46■□□□□ 0.07
BRCC3-201ENST00000330045 TMLHEQ9NVH6 421 aa15.46■□□□□ 0.07
BRCC3-201ENST00000330045 CACNA2D2Q9NY47 1150 aa15.46■□□□□ 0.07
BRCC3-201ENST00000330045 CCDC167Q9P0B6 97 aa15.46■□□□□ 0.07
BRCC3-201ENST00000330045 SFMBT1Q9UHJ3 866 aa15.46■□□□□ 0.07
BRCC3-201ENST00000330045 A0A1B0GVG6 124 aa15.45■□□□□ 0.06
BRCC3-201ENST00000330045 M0QZ92 97 aa15.45■□□□□ 0.06
BRCC3-201ENST00000330045 CCDC166P0CW27 439 aa15.45■□□□□ 0.06
BRCC3-201ENST00000330045 ARSAP15289 507 aa15.45■□□□□ 0.06
BRCC3-201ENST00000330045 WNT3AP56704 352 aa15.45■□□□□ 0.06
BRCC3-201ENST00000330045 PAN2Q504Q3 1202 aaKnown RBP15.45■□□□□ 0.06
BRCC3-201ENST00000330045 AGKQ53H12 422 aa15.45■□□□□ 0.06
BRCC3-201ENST00000330045 NOMO2Q5JPE7 1267 aa15.45■□□□□ 0.06
BRCC3-201ENST00000330045 REP15Q6BDI9 236 aa15.45■□□□□ 0.06
BRCC3-201ENST00000330045 RBM44Q6ZP01 1051 aaKnown RBP15.45■□□□□ 0.06
BRCC3-201ENST00000330045 METTL23Q86XA0 190 aa15.45■□□□□ 0.06
BRCC3-201ENST00000330045 SPNS2Q8IVW8 549 aa15.45■□□□□ 0.06
BRCC3-201ENST00000330045 CALML6Q8TD86 181 aa15.45■□□□□ 0.06
BRCC3-201ENST00000330045 EME1Q96AY2 570 aa15.45■□□□□ 0.06
BRCC3-201ENST00000330045 PCDHAC1Q9H158 963 aa15.45■□□□□ 0.06
BRCC3-201ENST00000330045 ABCC13Q9NSE7 274 aa15.45■□□□□ 0.06
BRCC3-201ENST00000330045 AP4S1Q9Y587 144 aa15.45■□□□□ 0.06
BRCC3-201ENST00000330045 HEATR9A2RTY3 570 aa15.45■□□□□ 0.06
BRCC3-201ENST00000330045 FBP2O00757 339 aa15.45■□□□□ 0.06
BRCC3-201ENST00000330045 VILLO15195 856 aa15.45■□□□□ 0.06
BRCC3-201ENST00000330045 MSI1O43347 362 aaKnown RBP15.45■□□□□ 0.06
BRCC3-201ENST00000330045 GPC4O75487 556 aa15.45■□□□□ 0.06
BRCC3-201ENST00000330045 RBP1P09455 135 aa15.45■□□□□ 0.06
BRCC3-201ENST00000330045 ATP6V1B1P15313 513 aa15.45■□□□□ 0.06
BRCC3-201ENST00000330045 PLK1P53350 603 aa15.45■□□□□ 0.06
BRCC3-201ENST00000330045 MAP7Q14244 749 aa15.45■□□□□ 0.06
BRCC3-201ENST00000330045 PPP1R3AQ16821 1122 aa15.45■□□□□ 0.06
BRCC3-201ENST00000330045 NADK2Q4G0N4 442 aa15.45■□□□□ 0.06
BRCC3-201ENST00000330045 ARMC3Q5W041 872 aa15.45■□□□□ 0.06
BRCC3-201ENST00000330045 PAOXQ6QHF9 649 aa15.45■□□□□ 0.06
BRCC3-201ENST00000330045 METTL25Q8N6Q8 603 aa15.45■□□□□ 0.06
BRCC3-201ENST00000330045 GABPB2Q8TAK5 448 aaPredicted RBP15.45■□□□□ 0.06
BRCC3-201ENST00000330045 TOP1MTQ969P6 601 aa15.45■□□□□ 0.06
BRCC3-201ENST00000330045 PHF21BQ96EK2 531 aa15.45■□□□□ 0.06
BRCC3-201ENST00000330045 CAPNS2Q96L46 248 aa15.45■□□□□ 0.06
BRCC3-201ENST00000330045 PRPF18Q99633 342 aaKnown RBP15.45■□□□□ 0.06
BRCC3-201ENST00000330045 SARDHQ9UL12 918 aa15.45■□□□□ 0.06
BRCC3-201ENST00000330045 TRPA1O75762 1119 aa15.44■□□□□ 0.06
BRCC3-201ENST00000330045 C8BP07358 591 aa15.44■□□□□ 0.06
BRCC3-201ENST00000330045 ZNF26P17031 533 aaPredicted RBP15.44■□□□□ 0.06
BRCC3-201ENST00000330045 HDCP19113 662 aa15.44■□□□□ 0.06
BRCC3-201ENST00000330045 LEPRP48357 1165 aaKnown RBP15.44■□□□□ 0.06
BRCC3-201ENST00000330045 CLCN5P51795 746 aa15.44■□□□□ 0.06
BRCC3-201ENST00000330045 MRPS6P82932 125 aaKnown RBP15.44■□□□□ 0.06
BRCC3-201ENST00000330045 BIRC2Q13490 618 aa15.44■□□□□ 0.06
BRCC3-201ENST00000330045 ACAP2Q15057 778 aa15.44■□□□□ 0.06
BRCC3-201ENST00000330045 MGAT5BQ3V5L5 792 aa15.44■□□□□ 0.06
BRCC3-201ENST00000330045 ARTNQ5T4W7 220 aa15.44■□□□□ 0.06
BRCC3-201ENST00000330045 TAF2Q6P1X5 1199 aa15.44■□□□□ 0.06
BRCC3-201ENST00000330045 AGMOQ6ZNB7 445 aa15.44■□□□□ 0.06
BRCC3-201ENST00000330045 TSPAN17Q96FV3 270 aa15.44■□□□□ 0.06
BRCC3-201ENST00000330045 MPP6Q9NZW5 540 aa15.44■□□□□ 0.06
BRCC3-201ENST00000330045 IPO11Q9UI26 975 aaKnown RBP15.44■□□□□ 0.06
BRCC3-201ENST00000330045 GIT1Q9Y2X7 761 aa15.44■□□□□ 0.06
BRCC3-201ENST00000330045 Q9Y3F1 56 aa15.44■□□□□ 0.06
BRCC3-201ENST00000330045 TRIM24O15164 1050 aa15.44■□□□□ 0.06
BRCC3-201ENST00000330045 B3GAT3O94766 335 aa15.44■□□□□ 0.06
BRCC3-201ENST00000330045 SNRPB2P08579 225 aaKnown RBP15.44■□□□□ 0.06
BRCC3-201ENST00000330045 PRKAR2AP13861 404 aaKnown RBP15.44■□□□□ 0.06
BRCC3-201ENST00000330045 BRCC3P46736 316 aa15.44■□□□□ 0.06
BRCC3-201ENST00000330045 RHDQ02161 417 aa15.44■□□□□ 0.06
BRCC3-201ENST00000330045 GALNT1Q10472 559 aaPredicted RBP15.44■□□□□ 0.06
BRCC3-201ENST00000330045 EML3Q32P44 896 aa15.44■□□□□ 0.06
BRCC3-201ENST00000330045 MFSD14CQ5VZR4 134 aa15.44■□□□□ 0.06
BRCC3-201ENST00000330045 AFMIDQ63HM1 303 aa15.44■□□□□ 0.06
BRCC3-201ENST00000330045 LRRTM3Q86VH5 581 aa15.44■□□□□ 0.06
BRCC3-201ENST00000330045 SLC22A9Q8IVM8 553 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms