RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 EDNRBP24530 442 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 RPA3P35244 121 aaPredicted RBP11.47□□□□□ -0.57
COL4A5-201ENST00000328300 COL9A3Q14050 684 aaPredicted RBP11.47□□□□□ -0.57
COL4A5-201ENST00000328300 GPRIN3Q6ZVF9 776 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 FAM228AQ86W67 206 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 KRT73Q86Y46 540 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 SIAH1Q8IUQ4 282 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 PAWRQ96IZ0 340 aaKnown RBP11.47□□□□□ -0.57
COL4A5-201ENST00000328300 ALG9Q9H6U8 611 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 ELAC1Q9H777 363 aaKnown RBP11.47□□□□□ -0.57
COL4A5-201ENST00000328300 EPN2O95208 641 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 GSNP06396 782 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 TFEBP19484 476 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 IGFBP4P22692 258 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 LDLRAD1Q5T700 205 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 TAC4Q86UU9 113 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 SLC41A1Q8IVJ1 513 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 RP9Q8TA86 221 aaKnown RBP11.47□□□□□ -0.57
COL4A5-201ENST00000328300 SLC44A1Q8WWI5 657 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 ACE2Q9BYF1 805 aaPredicted RBP11.47□□□□□ -0.57
COL4A5-201ENST00000328300 FBXO6Q9NRD1 293 aaPredicted RBP11.47□□□□□ -0.57
COL4A5-201ENST00000328300 KCNE2Q9Y6J6 123 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.47□□□□□ -0.57
COL4A5-201ENST00000328300 PRMT5O14744 637 aaPredicted RBP11.47□□□□□ -0.57
COL4A5-201ENST00000328300 CHRNB2P17787 502 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 JAK1P23458 1154 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 MC4RP32245 332 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 CAPZA2P47755 286 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 PFKPQ01813 784 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 BNIP2Q12982 314 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 LAPTM5Q13571 262 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 FUT11Q495W5 492 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 TMEM110Q86TL2 294 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 TSEN2Q8NCE0 465 aaKnown RBP11.47□□□□□ -0.57
COL4A5-201ENST00000328300 SELENOMQ8WWX9 145 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 SLCO2A1Q92959 643 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 CATSPER2Q96P56 530 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 NR1H4Q96RI1 486 aaPredicted RBP11.47□□□□□ -0.57
COL4A5-201ENST00000328300 ZFYVE1Q9HBF4 777 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 TCRBV9S1A1TA0A576 114 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 HDAC3O15379 428 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 KRT75O95678 551 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 RGS1Q08116 209 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 RCN1Q15293 331 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 MFSD4BQ5TF39 518 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 ANXA8L1Q5VT79 327 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 CTU1Q7Z7A3 348 aaKnown RBP11.47□□□□□ -0.57
COL4A5-201ENST00000328300 MAB21L3Q8N8X9 362 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 ATAD1Q8NBU5 361 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 VRTNQ9H8Y1 702 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 NUDT4Q9NZJ9 180 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 DLGAP2Q9P1A6 1054 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 MFSD11O43934 449 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 ULK1O75385 1050 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 UBOX5O94941 541 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 C1RP00736 705 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 CRHR1P34998 444 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 CES3Q6UWW8 571 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 TRABD2AQ86V40 505 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 DEFB107AQ8IZN7 70 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 CLYBLQ8N0X4 340 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 ACDQ96AP0 544 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 CDH19Q9H159 772 aa11.47□□□□□ -0.57
COL4A5-201ENST00000328300 GLYATL1P3A0A0U1RQE8 302 aa11.46□□□□□ -0.57
COL4A5-201ENST00000328300 IPO13O94829 963 aaKnown RBP11.46□□□□□ -0.57
COL4A5-201ENST00000328300 PLK1P53350 603 aa11.46□□□□□ -0.57
COL4A5-201ENST00000328300 INCA1Q0VD86 236 aa11.46□□□□□ -0.57
COL4A5-201ENST00000328300 CHST9Q7L1S5 443 aa11.46□□□□□ -0.57
COL4A5-201ENST00000328300 ADCK1Q86TW2 530 aa11.46□□□□□ -0.57
COL4A5-201ENST00000328300 DBF4BQ8NFT6 615 aa11.46□□□□□ -0.57
COL4A5-201ENST00000328300 CLP1Q92989 425 aaKnown RBP11.46□□□□□ -0.57
COL4A5-201ENST00000328300 USP7Q93009 1102 aa11.46□□□□□ -0.57
COL4A5-201ENST00000328300 SPATA17Q96L03 361 aa11.46□□□□□ -0.57
COL4A5-201ENST00000328300 CEP295NLQ96MC4 621 aa11.46□□□□□ -0.57
COL4A5-201ENST00000328300 BRD9Q9H8M2 597 aa11.46□□□□□ -0.57
COL4A5-201ENST00000328300 SNX15Q9NRS6 342 aa11.46□□□□□ -0.57
COL4A5-201ENST00000328300 DNM1LO00429 736 aa11.46□□□□□ -0.57
COL4A5-201ENST00000328300 PHGDHO43175 533 aaKnown RBP11.46□□□□□ -0.57
COL4A5-201ENST00000328300 PIK3R1P27986 724 aa11.46□□□□□ -0.57
COL4A5-201ENST00000328300 GPD2P43304 727 aa11.46□□□□□ -0.57
COL4A5-201ENST00000328300 TMED10P49755 219 aaKnown RBP11.46□□□□□ -0.57
COL4A5-201ENST00000328300 AADACL2Q6P093 401 aa11.46□□□□□ -0.57
COL4A5-201ENST00000328300 EID3Q8N140 333 aa11.46□□□□□ -0.57
COL4A5-201ENST00000328300 KREMEN2Q8NCW0 462 aa11.46□□□□□ -0.57
COL4A5-201ENST00000328300 MTF2Q9Y483 593 aaPredicted RBP11.46□□□□□ -0.57
COL4A5-201ENST00000328300 GABRDO14764 452 aa11.46□□□□□ -0.57
COL4A5-201ENST00000328300 ATG13O75143 517 aa11.46□□□□□ -0.57
COL4A5-201ENST00000328300 SPIDRQ14159 915 aa11.46□□□□□ -0.57
COL4A5-201ENST00000328300 KIAA1324Q6UXG2 1013 aaKnown RBP11.46□□□□□ -0.57
COL4A5-201ENST00000328300 PRICKLE1Q96MT3 831 aaPredicted RBP11.46□□□□□ -0.57
COL4A5-201ENST00000328300 CD248Q9HCU0 757 aa11.46□□□□□ -0.57
COL4A5-201ENST00000328300 RPS6KA6Q9UK32 745 aa11.46□□□□□ -0.57
COL4A5-201ENST00000328300 TCAF1Q9Y4C2 921 aa11.46□□□□□ -0.57
COL4A5-201ENST00000328300 PAPSS1O43252 624 aaPredicted RBP11.46□□□□□ -0.58
COL4A5-201ENST00000328300 IDO1P14902 403 aa11.46□□□□□ -0.58
COL4A5-201ENST00000328300 PSMC3P17980 439 aa11.46□□□□□ -0.58
COL4A5-201ENST00000328300 LRPAP1P30533 357 aa11.46□□□□□ -0.58
COL4A5-201ENST00000328300 SMIM11AP58511 58 aa11.46□□□□□ -0.58
COL4A5-201ENST00000328300 SOWAHAQ2M3V2 549 aa11.46□□□□□ -0.58
COL4A5-201ENST00000328300 SPATA19Q7Z5L4 167 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms