RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 PTPRHQ9HD43 1115 aa12.86□□□□□ -0.35
CCDC60-201ENST00000327554 CASS4Q9NQ75 786 aa12.86□□□□□ -0.35
CCDC60-201ENST00000327554 TLR9Q9NR96 1032 aa12.86□□□□□ -0.35
CCDC60-201ENST00000327554 MTF2Q9Y483 593 aaPredicted RBP12.86□□□□□ -0.35
CCDC60-201ENST00000327554 DGKBQ9Y6T7 804 aa12.86□□□□□ -0.35
CCDC60-201ENST00000327554 SPATA31C2B4DYI2 1134 aa12.86□□□□□ -0.35
CCDC60-201ENST00000327554 MSI1O43347 362 aaKnown RBP12.86□□□□□ -0.35
CCDC60-201ENST00000327554 AP2A1O95782 977 aa12.86□□□□□ -0.35
CCDC60-201ENST00000327554 HSD17B1P14061 328 aa12.86□□□□□ -0.35
CCDC60-201ENST00000327554 BROXQ5VW32 411 aa12.86□□□□□ -0.35
CCDC60-201ENST00000327554 FAM219BQ5XKK7 198 aa12.86□□□□□ -0.35
CCDC60-201ENST00000327554 MPZL3Q6UWV2 235 aa12.86□□□□□ -0.35
CCDC60-201ENST00000327554 SLC16A12Q6ZSM3 486 aa12.86□□□□□ -0.35
CCDC60-201ENST00000327554 CYP2U1Q7Z449 544 aa12.86□□□□□ -0.35
CCDC60-201ENST00000327554 CDR2LQ86X02 465 aaPredicted RBP12.86□□□□□ -0.35
CCDC60-201ENST00000327554 SFRP1Q8N474 314 aa12.86□□□□□ -0.35
CCDC60-201ENST00000327554 SPATA6LQ8N4H0 392 aa12.86□□□□□ -0.35
CCDC60-201ENST00000327554 TTC30BQ8N4P2 665 aa12.86□□□□□ -0.35
CCDC60-201ENST00000327554 MAGEE2Q8TD90 523 aaPredicted RBP12.86□□□□□ -0.35
CCDC60-201ENST00000327554 BEGAINQ9BUH8 593 aa12.86□□□□□ -0.35
CCDC60-201ENST00000327554 RHOBTB2Q9BYZ6 727 aa12.86□□□□□ -0.35
CCDC60-201ENST00000327554 POMKQ9H5K3 350 aa12.86□□□□□ -0.35
CCDC60-201ENST00000327554 HMG20AQ9NP66 347 aa12.86□□□□□ -0.35
CCDC60-201ENST00000327554 SCUBE2Q9NQ36 999 aa12.86□□□□□ -0.35
CCDC60-201ENST00000327554 CHRAC1Q9NRG0 131 aa12.86□□□□□ -0.35
CCDC60-201ENST00000327554 RNF146Q9NTX7 359 aa12.86□□□□□ -0.35
CCDC60-201ENST00000327554 MAP10Q9P2G4 905 aa12.86□□□□□ -0.35
CCDC60-201ENST00000327554 MAGED2Q9UNF1 606 aaPredicted RBP12.86□□□□□ -0.35
CCDC60-201ENST00000327554 TLL2Q9Y6L7 1015 aa12.86□□□□□ -0.35
CCDC60-201ENST00000327554 ABCB7O75027 752 aa12.85□□□□□ -0.35
CCDC60-201ENST00000327554 BCAS1O75363 584 aaPredicted RBP12.85□□□□□ -0.35
CCDC60-201ENST00000327554 MYO1DO94832 1006 aa12.85□□□□□ -0.35
CCDC60-201ENST00000327554 NCAM1P13591 858 aa12.85□□□□□ -0.35
CCDC60-201ENST00000327554 GFAPP14136 432 aa12.85□□□□□ -0.35
CCDC60-201ENST00000327554 TCEA1P23193 301 aaKnown RBP12.85□□□□□ -0.35
CCDC60-201ENST00000327554 EEF1B2P24534 225 aaKnown RBP12.85□□□□□ -0.35
CCDC60-201ENST00000327554 TKTP29401 623 aaKnown RBP12.85□□□□□ -0.35
CCDC60-201ENST00000327554 EEF1DP29692 281 aaKnown RBP12.85□□□□□ -0.35
CCDC60-201ENST00000327554 RFC2P35250 354 aa12.85□□□□□ -0.35
CCDC60-201ENST00000327554 LEPRP48357 1165 aaKnown RBP12.85□□□□□ -0.35
CCDC60-201ENST00000327554 YBX1P67809 324 aaKnown RBP12.85□□□□□ -0.35
CCDC60-201ENST00000327554 INCA1Q0VD86 236 aa12.85□□□□□ -0.35
CCDC60-201ENST00000327554 PSMD5Q16401 504 aa12.85□□□□□ -0.35
CCDC60-201ENST00000327554 PKDCCQ504Y2 493 aa12.85□□□□□ -0.35
CCDC60-201ENST00000327554 EEF1DP3Q658K8 133 aa12.85□□□□□ -0.35
CCDC60-201ENST00000327554 PID1Q7Z2X4 250 aa12.85□□□□□ -0.35
CCDC60-201ENST00000327554 DSG4Q86SJ6 1040 aa12.85□□□□□ -0.35
CCDC60-201ENST00000327554 PSTKQ8IV42 348 aaKnown RBP12.85□□□□□ -0.35
CCDC60-201ENST00000327554 TP53INP2Q8IXH6 220 aa12.85□□□□□ -0.35
CCDC60-201ENST00000327554 DHRS1Q96LJ7 313 aa12.85□□□□□ -0.35
CCDC60-201ENST00000327554 WDR12Q9GZL7 423 aaKnown RBP12.85□□□□□ -0.35
CCDC60-201ENST00000327554 PRDM12Q9H4Q4 367 aa12.85□□□□□ -0.35
CCDC60-201ENST00000327554 ACTR3BQ9P1U1 418 aa12.85□□□□□ -0.35
CCDC60-201ENST00000327554 NEMP2A6NFY4 417 aa12.85□□□□□ -0.35
CCDC60-201ENST00000327554 A8MU76 341 aa12.85□□□□□ -0.35
CCDC60-201ENST00000327554 ARPC2O15144 300 aa12.85□□□□□ -0.35
CCDC60-201ENST00000327554 DNAJB1P25685 340 aa12.85□□□□□ -0.35
CCDC60-201ENST00000327554 NMBRP28336 390 aa12.85□□□□□ -0.35
CCDC60-201ENST00000327554 SHMT2P34897 504 aa12.85□□□□□ -0.35
CCDC60-201ENST00000327554 DNAJB13P59910 316 aa12.85□□□□□ -0.35
CCDC60-201ENST00000327554 DNASE1L3Q13609 305 aa12.85□□□□□ -0.35
CCDC60-201ENST00000327554 PGS1Q32NB8 556 aa12.85□□□□□ -0.35
CCDC60-201ENST00000327554 ARL13BQ3SXY8 428 aa12.85□□□□□ -0.35
CCDC60-201ENST00000327554 CYHR1Q6ZMK1 362 aa12.85□□□□□ -0.35
CCDC60-201ENST00000327554 SLC26A9Q7LBE3 791 aa12.85□□□□□ -0.35
CCDC60-201ENST00000327554 TFAP2DQ7Z6R9 452 aa12.85□□□□□ -0.35
CCDC60-201ENST00000327554 NT5DC4Q86YG4 428 aa12.85□□□□□ -0.35
CCDC60-201ENST00000327554 CEP97Q8IW35 865 aa12.85□□□□□ -0.35
CCDC60-201ENST00000327554 DNAAF3Q8N9W5 541 aa12.85□□□□□ -0.35
CCDC60-201ENST00000327554 CCNYQ8ND76 341 aa12.85□□□□□ -0.35
CCDC60-201ENST00000327554 CLEC4CQ8WTT0 213 aa12.85□□□□□ -0.35
CCDC60-201ENST00000327554 SGCDQ92629 289 aa12.85□□□□□ -0.35
CCDC60-201ENST00000327554 OTUD5Q96G74 571 aa12.85□□□□□ -0.35
CCDC60-201ENST00000327554 CDHR1Q96JP9 859 aa12.85□□□□□ -0.35
CCDC60-201ENST00000327554 FAR2Q96K12 515 aa12.85□□□□□ -0.35
CCDC60-201ENST00000327554 MUS81Q96NY9 551 aa12.85□□□□□ -0.35
CCDC60-201ENST00000327554 ATP13A3Q9H7F0 1226 aa12.85□□□□□ -0.35
CCDC60-201ENST00000327554 ZNF70Q9UC06 446 aaPredicted RBP12.85□□□□□ -0.35
CCDC60-201ENST00000327554 ZNF639Q9UID6 485 aa12.85□□□□□ -0.35
CCDC60-201ENST00000327554 TRPC5Q9UL62 973 aaPredicted RBP12.85□□□□□ -0.35
CCDC60-201ENST00000327554 ACOT9Q9Y305 439 aa12.85□□□□□ -0.35
CCDC60-201ENST00000327554 BPTFQ12830 3046 aa12.85□□□□□ -0.35
CCDC60-201ENST00000327554 LCTP09848 1927 aa12.85□□□□□ -0.35
CCDC60-201ENST00000327554 H0YAE9 185 aa12.84□□□□□ -0.35
CCDC60-201ENST00000327554 FXYD1O00168 92 aa12.84□□□□□ -0.35
CCDC60-201ENST00000327554 GPC4O75487 556 aa12.84□□□□□ -0.35
CCDC60-201ENST00000327554 RAD17O75943 681 aa12.84□□□□□ -0.35
CCDC60-201ENST00000327554 ASNSP08243 561 aa12.84□□□□□ -0.35
CCDC60-201ENST00000327554 YWHAQP27348 245 aa12.84□□□□□ -0.35
CCDC60-201ENST00000327554 TPTEP56180 551 aa12.84□□□□□ -0.35
CCDC60-201ENST00000327554 OCA2Q04671 838 aa12.84□□□□□ -0.35
CCDC60-201ENST00000327554 BNIP2Q12982 314 aa12.84□□□□□ -0.35
CCDC60-201ENST00000327554 CAMK2BQ13554 666 aa12.84□□□□□ -0.35
CCDC60-201ENST00000327554 PRPSAP1Q14558 356 aa12.84□□□□□ -0.35
CCDC60-201ENST00000327554 NDUFA5Q16718 116 aa12.84□□□□□ -0.35
CCDC60-201ENST00000327554 PPP1R26Q5T8A7 1209 aaPredicted RBP12.84□□□□□ -0.35
CCDC60-201ENST00000327554 TBPL2Q6SJ96 375 aa12.84□□□□□ -0.35
CCDC60-201ENST00000327554 MFSD6LQ8IWD5 586 aa12.84□□□□□ -0.35
CCDC60-201ENST00000327554 NSUN6Q8TEA1 469 aaKnown RBP12.84□□□□□ -0.35
CCDC60-201ENST00000327554 NRBF2Q96F24 287 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms