RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 NAB1Q13506 487 aa18.91■□□□□ 0.62
EXOSC3-201ENST00000327304 FRG1Q14331 258 aaKnown RBP18.91■□□□□ 0.62
EXOSC3-201ENST00000327304 SPANXN3Q5MJ09 141 aa18.91■□□□□ 0.62
EXOSC3-201ENST00000327304 KDELC1Q6UW63 502 aa18.91■□□□□ 0.62
EXOSC3-201ENST00000327304 CTAGE3PQ8IX95 158 aa18.91■□□□□ 0.62
EXOSC3-201ENST00000327304 PPM1NQ8N819 430 aa18.91■□□□□ 0.62
EXOSC3-201ENST00000327304 DNAAF3Q8N9W5 541 aa18.91■□□□□ 0.62
EXOSC3-201ENST00000327304 OR6K2Q8NGY2 324 aa18.91■□□□□ 0.62
EXOSC3-201ENST00000327304 FRS2Q8WU20 508 aa18.91■□□□□ 0.62
EXOSC3-201ENST00000327304 ISG20Q96AZ6 181 aaKnown RBP18.91■□□□□ 0.62
EXOSC3-201ENST00000327304 TADA1Q96BN2 335 aa18.91■□□□□ 0.62
EXOSC3-201ENST00000327304 NUDCD1Q96RS6 583 aa18.91■□□□□ 0.62
EXOSC3-201ENST00000327304 CEP44Q9C0F1 390 aa18.91■□□□□ 0.62
EXOSC3-201ENST00000327304 MTG2Q9H4K7 406 aa18.91■□□□□ 0.62
EXOSC3-201ENST00000327304 ZDHHC4Q9NPG8 344 aa18.91■□□□□ 0.62
EXOSC3-201ENST00000327304 SCUBE2Q9NQ36 999 aa18.91■□□□□ 0.62
EXOSC3-201ENST00000327304 HAUS2Q9NVX0 235 aa18.91■□□□□ 0.62
EXOSC3-201ENST00000327304 PLA2G4CQ9UP65 541 aa18.91■□□□□ 0.62
EXOSC3-201ENST00000327304 A0A1W2PPM1 405 aa18.9■□□□□ 0.62
EXOSC3-201ENST00000327304 SHISA7A6NL88 538 aa18.9■□□□□ 0.62
EXOSC3-201ENST00000327304 PMPCBO75439 489 aa18.9■□□□□ 0.62
EXOSC3-201ENST00000327304 PIAS1O75925 651 aa18.9■□□□□ 0.62
EXOSC3-201ENST00000327304 VASPP50552 380 aaPredicted RBP18.9■□□□□ 0.62
EXOSC3-201ENST00000327304 PPARDQ03181 441 aa18.9■□□□□ 0.62
EXOSC3-201ENST00000327304 NSUN2Q08J23 767 aaKnown RBP eCLIP18.9■□□□□ 0.62
EXOSC3-201ENST00000327304 MPP2Q14168 576 aa18.9■□□□□ 0.62
EXOSC3-201ENST00000327304 CRYMQ14894 314 aa18.9■□□□□ 0.62
EXOSC3-201ENST00000327304 FNDC3BQ53EP0 1204 aaKnown RBP18.9■□□□□ 0.62
EXOSC3-201ENST00000327304 SLC44A4Q53GD3 710 aa18.9■□□□□ 0.62
EXOSC3-201ENST00000327304 EGFLAMQ63HQ2 1017 aa18.9■□□□□ 0.62
EXOSC3-201ENST00000327304 Q6ZVU0 165 aa18.9■□□□□ 0.62
EXOSC3-201ENST00000327304 SRLQ86TD4 932 aa18.9■□□□□ 0.62
EXOSC3-201ENST00000327304 SUGP1Q8IWZ8 645 aaKnown RBP18.9■□□□□ 0.62
EXOSC3-201ENST00000327304 ZNF366Q8N895 744 aa18.9■□□□□ 0.62
EXOSC3-201ENST00000327304 IPMKQ8NFU5 416 aa18.9■□□□□ 0.62
EXOSC3-201ENST00000327304 CDKL2Q92772 493 aa18.9■□□□□ 0.62
EXOSC3-201ENST00000327304 CCT8L2Q96SF2 557 aa18.9■□□□□ 0.62
EXOSC3-201ENST00000327304 IL22Q9GZX6 179 aa18.9■□□□□ 0.62
EXOSC3-201ENST00000327304 SMYD2Q9NRG4 433 aa18.9■□□□□ 0.62
EXOSC3-201ENST00000327304 CXorf49A8MYA2 514 aaPredicted RBP18.9■□□□□ 0.62
EXOSC3-201ENST00000327304 K7EQS6 105 aa18.9■□□□□ 0.62
EXOSC3-201ENST00000327304 TYROBPO43914 113 aa18.9■□□□□ 0.62
EXOSC3-201ENST00000327304 BNIP3LO60238 219 aa18.9■□□□□ 0.62
EXOSC3-201ENST00000327304 USP12O75317 370 aa18.9■□□□□ 0.62
EXOSC3-201ENST00000327304 KRT37O76014 449 aa18.9■□□□□ 0.62
EXOSC3-201ENST00000327304 BMP1P13497 986 aa18.9■□□□□ 0.62
EXOSC3-201ENST00000327304 NNMTP40261 264 aa18.9■□□□□ 0.62
EXOSC3-201ENST00000327304 SERPINB9P50453 376 aa18.9■□□□□ 0.62
EXOSC3-201ENST00000327304 ST8SIA6P61647 398 aa18.9■□□□□ 0.62
EXOSC3-201ENST00000327304 CRADDP78560 199 aa18.9■□□□□ 0.62
EXOSC3-201ENST00000327304 ZNF234Q14588 700 aa18.9■□□□□ 0.62
EXOSC3-201ENST00000327304 FSTL4Q6MZW2 842 aa18.9■□□□□ 0.62
EXOSC3-201ENST00000327304 TRMT10BQ6PF06 316 aaKnown RBP18.9■□□□□ 0.62
EXOSC3-201ENST00000327304 MARK2Q7KZI7 788 aaKnown RBP18.9■□□□□ 0.62
EXOSC3-201ENST00000327304 TMEM135Q86UB9 458 aa18.9■□□□□ 0.62
EXOSC3-201ENST00000327304 PCDH20Q8N6Y1 951 aaKnown RBP18.9■□□□□ 0.62
EXOSC3-201ENST00000327304 ANKRD42Q8N9B4 389 aa18.9■□□□□ 0.62
EXOSC3-201ENST00000327304 UCMAQ8WVF2 138 aa18.9■□□□□ 0.62
EXOSC3-201ENST00000327304 DYDC1Q8WWB3 177 aa18.9■□□□□ 0.62
EXOSC3-201ENST00000327304 MTBPQ96DY7 904 aa18.9■□□□□ 0.62
EXOSC3-201ENST00000327304 CHMP6Q96FZ7 201 aa18.9■□□□□ 0.62
EXOSC3-201ENST00000327304 TRIM56Q9BRZ2 755 aaKnown RBP18.9■□□□□ 0.62
EXOSC3-201ENST00000327304 EVLQ9UI08 416 aaPredicted RBP18.9■□□□□ 0.62
EXOSC3-201ENST00000327304 SORCS3Q9UPU3 1222 aa18.9■□□□□ 0.62
EXOSC3-201ENST00000327304 TCF20Q9UGU0 1960 aaKnown RBP18.89■□□□□ 0.62
EXOSC3-201ENST00000327304 IGSF6O95976 241 aa18.89■□□□□ 0.61
EXOSC3-201ENST00000327304 EGFP01133 1207 aa18.89■□□□□ 0.61
EXOSC3-201ENST00000327304 SNRPAP09012 282 aaKnown RBP18.89■□□□□ 0.61
EXOSC3-201ENST00000327304 GLULP15104 373 aa18.89■□□□□ 0.61
EXOSC3-201ENST00000327304 KRT4P19013 534 aa18.89■□□□□ 0.61
EXOSC3-201ENST00000327304 CNTFP26441 200 aa18.89■□□□□ 0.61
EXOSC3-201ENST00000327304 WNT3AP56704 352 aa18.89■□□□□ 0.61
EXOSC3-201ENST00000327304 PCSK7Q16549 785 aa18.89■□□□□ 0.61
EXOSC3-201ENST00000327304 TMEM196Q5HYL7 178 aa18.89■□□□□ 0.61
EXOSC3-201ENST00000327304 NCEH1Q6PIU2 408 aa18.89■□□□□ 0.61
EXOSC3-201ENST00000327304 TPRG1Q6ZUI0 275 aa18.89■□□□□ 0.61
EXOSC3-201ENST00000327304 NUDT18Q6ZVK8 323 aa18.89■□□□□ 0.61
EXOSC3-201ENST00000327304 OR2AP1Q8NGE2 309 aa18.89■□□□□ 0.61
EXOSC3-201ENST00000327304 DENND1AQ8TEH3 1009 aa18.89■□□□□ 0.61
EXOSC3-201ENST00000327304 MRGPRX2Q96LB1 330 aa18.89■□□□□ 0.61
EXOSC3-201ENST00000327304 ZNF317Q96PQ6 595 aaPredicted RBP18.89■□□□□ 0.61
EXOSC3-201ENST00000327304 ACOX2Q99424 681 aa18.89■□□□□ 0.61
EXOSC3-201ENST00000327304 APOL2Q9BQE5 337 aa18.89■□□□□ 0.61
EXOSC3-201ENST00000327304 PIH1D1Q9NWS0 290 aaKnown RBP18.89■□□□□ 0.61
EXOSC3-201ENST00000327304 THAP10Q9P2Z0 257 aaPredicted RBP18.89■□□□□ 0.61
EXOSC3-201ENST00000327304 KRT38O76015 456 aa18.88■□□□□ 0.61
EXOSC3-201ENST00000327304 USP1O94782 785 aa18.88■□□□□ 0.61
EXOSC3-201ENST00000327304 GSRP00390 522 aa18.88■□□□□ 0.61
EXOSC3-201ENST00000327304 MT-ND3P03897 115 aa18.88■□□□□ 0.61
EXOSC3-201ENST00000327304 SERPINF2P08697 491 aa18.88■□□□□ 0.61
EXOSC3-201ENST00000327304 CHRM1P11229 460 aaPredicted RBP18.88■□□□□ 0.61
EXOSC3-201ENST00000327304 HLA-EP13747 358 aa18.88■□□□□ 0.61
EXOSC3-201ENST00000327304 GKP32189 559 aa18.88■□□□□ 0.61
EXOSC3-201ENST00000327304 TNFRSF4P43489 277 aa18.88■□□□□ 0.61
EXOSC3-201ENST00000327304 CSNK1DP48730 415 aa18.88■□□□□ 0.61
EXOSC3-201ENST00000327304 SEC13P55735 322 aa18.88■□□□□ 0.61
EXOSC3-201ENST00000327304 MPP3Q13368 585 aa18.88■□□□□ 0.61
EXOSC3-201ENST00000327304 CARD16Q5EG05 197 aa18.88■□□□□ 0.61
EXOSC3-201ENST00000327304 ARMC3Q5W041 872 aa18.88■□□□□ 0.61
EXOSC3-201ENST00000327304 KDELC2Q7Z4H8 507 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms