RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 IL2P60568 153 aa11.9□□□□□ -0.5
DDR1-223ENST00000324771 PGS1Q32NB8 556 aa11.9□□□□□ -0.5
DDR1-223ENST00000324771 OTUD3Q5T2D3 398 aaPredicted RBP11.9□□□□□ -0.5
DDR1-223ENST00000324771 IL27RAQ6UWB1 636 aa11.9□□□□□ -0.5
DDR1-223ENST00000324771 PIGWQ7Z7B1 504 aa11.9□□□□□ -0.5
DDR1-223ENST00000324771 FSTL5Q8N475 847 aaPredicted RBP11.9□□□□□ -0.5
DDR1-223ENST00000324771 OR4L1Q8NH43 312 aa11.9□□□□□ -0.5
DDR1-223ENST00000324771 DNAJB14Q8TBM8 379 aa11.9□□□□□ -0.5
DDR1-223ENST00000324771 GFM2Q969S9 779 aaKnown RBP11.9□□□□□ -0.5
DDR1-223ENST00000324771 NPAS2Q99743 824 aa11.9□□□□□ -0.5
DDR1-223ENST00000324771 PCDHB8Q9UN66 801 aa11.9□□□□□ -0.5
DDR1-223ENST00000324771 FAF1Q9UNN5 650 aaPredicted RBP11.9□□□□□ -0.5
DDR1-223ENST00000324771 MATN3O15232 486 aa11.9□□□□□ -0.5
DDR1-223ENST00000324771 SNAP91O60641 907 aa11.9□□□□□ -0.5
DDR1-223ENST00000324771 PCDH8O95206 1070 aa11.9□□□□□ -0.5
DDR1-223ENST00000324771 CRHR1P34998 444 aa11.9□□□□□ -0.5
DDR1-223ENST00000324771 CCNG1P51959 295 aa11.9□□□□□ -0.5
DDR1-223ENST00000324771 ZNF284Q2VY69 593 aa11.9□□□□□ -0.5
DDR1-223ENST00000324771 ALFQ53S48 1182 aa11.9□□□□□ -0.5
DDR1-223ENST00000324771 TRNP1Q6NT89 227 aa11.9□□□□□ -0.5
DDR1-223ENST00000324771 RD3Q7Z3Z2 195 aa11.9□□□□□ -0.5
DDR1-223ENST00000324771 RTL3Q8N8U3 475 aaKnown RBP11.9□□□□□ -0.5
DDR1-223ENST00000324771 RNPEPL1Q9HAU8 725 aa11.9□□□□□ -0.5
DDR1-223ENST00000324771 KLQ9UEF7 1012 aa11.9□□□□□ -0.5
DDR1-223ENST00000324771 APPL1Q9UKG1 709 aa11.9□□□□□ -0.5
DDR1-223ENST00000324771 VPS9D1Q9Y2B5 631 aa11.9□□□□□ -0.5
DDR1-223ENST00000324771 ARL5AQ9Y689 179 aa11.9□□□□□ -0.5
DDR1-223ENST00000324771 CPSF4O95639 269 aaKnown RBP11.89□□□□□ -0.51
DDR1-223ENST00000324771 CCR10P46092 362 aa11.89□□□□□ -0.51
DDR1-223ENST00000324771 SLC11A1P49279 550 aa11.89□□□□□ -0.51
DDR1-223ENST00000324771 GNA12Q03113 381 aa11.89□□□□□ -0.51
DDR1-223ENST00000324771 ATP6AP1LQ52LC2 224 aa11.89□□□□□ -0.51
DDR1-223ENST00000324771 SETD3Q86TU7 594 aaPredicted RBP11.89□□□□□ -0.51
DDR1-223ENST00000324771 FAM156AQ8NDB6 213 aa11.89□□□□□ -0.51
DDR1-223ENST00000324771 RBBP8Q99708 897 aa11.89□□□□□ -0.51
DDR1-223ENST00000324771 CPQQ9Y646 472 aa11.89□□□□□ -0.51
DDR1-223ENST00000324771 HS3ST4Q9Y661 456 aa11.89□□□□□ -0.51
DDR1-223ENST00000324771 ASCC3Q8N3C0 2202 aaKnown RBP11.89□□□□□ -0.51
DDR1-223ENST00000324771 TTC36A6NLP5 189 aa11.89□□□□□ -0.51
DDR1-223ENST00000324771 AGRPO00253 132 aa11.89□□□□□ -0.51
DDR1-223ENST00000324771 UGT2B4P06133 528 aa11.89□□□□□ -0.51
DDR1-223ENST00000324771 RHOQP17081 205 aa11.89□□□□□ -0.51
DDR1-223ENST00000324771 GLUD2P49448 558 aa11.89□□□□□ -0.51
DDR1-223ENST00000324771 BNIP1Q12981 228 aa11.89□□□□□ -0.51
DDR1-223ENST00000324771 INPP5AQ14642 412 aa11.89□□□□□ -0.51
DDR1-223ENST00000324771 NRF1Q16656 503 aa11.89□□□□□ -0.51
DDR1-223ENST00000324771 SLC9A4Q6AI14 798 aa11.89□□□□□ -0.51
DDR1-223ENST00000324771 TRMT11Q7Z4G4 463 aaKnown RBP11.89□□□□□ -0.51
DDR1-223ENST00000324771 ZNF366Q8N895 744 aa11.89□□□□□ -0.51
DDR1-223ENST00000324771 SEC14L1Q92503 715 aa11.89□□□□□ -0.51
DDR1-223ENST00000324771 PPP1R10Q96QC0 940 aaKnown RBP11.89□□□□□ -0.51
DDR1-223ENST00000324771 ELOVL6Q9H5J4 265 aa11.89□□□□□ -0.51
DDR1-223ENST00000324771 SAR1AQ9NR31 198 aa11.89□□□□□ -0.51
DDR1-223ENST00000324771 GID8Q9NWU2 228 aa11.89□□□□□ -0.51
DDR1-223ENST00000324771 ARL15Q9NXU5 204 aa11.89□□□□□ -0.51
DDR1-223ENST00000324771 CNTN6Q9UQ52 1028 aa11.89□□□□□ -0.51
DDR1-223ENST00000324771 RAI2Q9Y5P3 530 aa11.89□□□□□ -0.51
DDR1-223ENST00000324771 NEDD8-MDP1E9PL57 170 aa11.89□□□□□ -0.51
DDR1-223ENST00000324771 PSMD12O00232 456 aaPredicted RBP11.89□□□□□ -0.51
DDR1-223ENST00000324771 ACSL4O60488 711 aa11.89□□□□□ -0.51
DDR1-223ENST00000324771 MLNP12872 115 aa11.89□□□□□ -0.51
DDR1-223ENST00000324771 LIMK2P53671 638 aa11.89□□□□□ -0.51
DDR1-223ENST00000324771 CPSF6Q16630 551 aaKnown RBP eCLIP11.89□□□□□ -0.51
DDR1-223ENST00000324771 TRMT5Q32P41 509 aaKnown RBP11.89□□□□□ -0.51
DDR1-223ENST00000324771 STXBP5Q5T5C0 1151 aa11.89□□□□□ -0.51
DDR1-223ENST00000324771 HECTD2Q5U5R9 776 aa11.89□□□□□ -0.51
DDR1-223ENST00000324771 UGT3A1Q6NUS8 523 aa11.89□□□□□ -0.51
DDR1-223ENST00000324771 ZNF598Q86UK7 904 aaKnown RBP11.89□□□□□ -0.51
DDR1-223ENST00000324771 SERINC5Q86VE9 423 aa11.89□□□□□ -0.51
DDR1-223ENST00000324771 C11orf74Q86VG3 221 aa11.89□□□□□ -0.51
DDR1-223ENST00000324771 SYTL1Q8IYJ3 562 aa11.89□□□□□ -0.51
DDR1-223ENST00000324771 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.89□□□□□ -0.519e-6■■■■■ 32.4
DDR1-223ENST00000324771 CREBZFQ9NS37 354 aa11.89□□□□□ -0.51
DDR1-223ENST00000324771 GNEQ9Y223 722 aaKnown RBP11.89□□□□□ -0.51
DDR1-223ENST00000324771 C15orf41Q9Y2V0 281 aa11.89□□□□□ -0.51
DDR1-223ENST00000324771 SYCE1LA8MT33 242 aa11.88□□□□□ -0.51
DDR1-223ENST00000324771 COX4I1P13073 169 aa11.88□□□□□ -0.51
DDR1-223ENST00000324771 HGFP14210 728 aa11.88□□□□□ -0.51
DDR1-223ENST00000324771 LPOP22079 712 aaPredicted RBP11.88□□□□□ -0.51
DDR1-223ENST00000324771 PTDSS1P48651 473 aaKnown RBP11.88□□□□□ -0.51
DDR1-223ENST00000324771 ZNF135P52742 658 aaPredicted RBP11.88□□□□□ -0.51
DDR1-223ENST00000324771 PHEXP78562 749 aa11.88□□□□□ -0.51
DDR1-223ENST00000324771 ACOX1Q15067 660 aa11.88□□□□□ -0.51
DDR1-223ENST00000324771 RALGPS1Q5JS13 557 aa11.88□□□□□ -0.51
DDR1-223ENST00000324771 HPS6Q86YV9 775 aa11.88□□□□□ -0.51
DDR1-223ENST00000324771 NPAS4Q8IUM7 802 aa11.88□□□□□ -0.51
DDR1-223ENST00000324771 SLC22A9Q8IVM8 553 aa11.88□□□□□ -0.51
DDR1-223ENST00000324771 FIBCD1Q8N539 461 aa11.88□□□□□ -0.51
DDR1-223ENST00000324771 ACMSDQ8TDX5 336 aa11.88□□□□□ -0.51
DDR1-223ENST00000324771 SUSD3Q96L08 255 aa11.88□□□□□ -0.51
DDR1-223ENST00000324771 SLC9A7Q96T83 725 aa11.88□□□□□ -0.51
DDR1-223ENST00000324771 ASAH2Q9NR71 780 aa11.88□□□□□ -0.51
DDR1-223ENST00000324771 TBC1D3BA6NDS4 549 aa11.88□□□□□ -0.51
DDR1-223ENST00000324771 SEC22BO75396 215 aa11.88□□□□□ -0.51
DDR1-223ENST00000324771 IGSF6O95976 241 aa11.88□□□□□ -0.51
DDR1-223ENST00000324771 ABCB1P08183 1280 aaPredicted RBP11.88□□□□□ -0.51
DDR1-223ENST00000324771 TSHRP16473 764 aa11.88□□□□□ -0.51
DDR1-223ENST00000324771 ZNF23P17027 643 aa11.88□□□□□ -0.51
DDR1-223ENST00000324771 CCNCP24863 283 aa11.88□□□□□ -0.51
DDR1-223ENST00000324771 WASP42768 502 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms