RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 RMDN1Q96DB5 314 aa18.54■□□□□ 0.56
USP39-201ENST00000323701 SEC16BQ96JE7 1060 aa18.54■□□□□ 0.56
USP39-201ENST00000323701 BBS2Q9BXC9 721 aa18.54■□□□□ 0.56
USP39-201ENST00000323701 TNKS2Q9H2K2 1166 aa18.54■□□□□ 0.56
USP39-201ENST00000323701 PIDD1Q9HB75 910 aa18.54■□□□□ 0.56
USP39-201ENST00000323701 MKS1Q9NXB0 559 aa18.54■□□□□ 0.56
USP39-201ENST00000323701 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.54■□□□□ 0.564e-10■■■□□ 17.5
USP39-201ENST00000323701 KIAA1522Q9P206 1035 aaPredicted RBP18.54■□□□□ 0.56
USP39-201ENST00000323701 SIN3BO75182 1162 aa18.53■□□□□ 0.56
USP39-201ENST00000323701 HAUS5O94927 633 aa18.53■□□□□ 0.56
USP39-201ENST00000323701 GSRP00390 522 aa18.53■□□□□ 0.56
USP39-201ENST00000323701 TYK2P29597 1187 aa18.53■□□□□ 0.56
USP39-201ENST00000323701 CRHR1P34998 444 aa18.53■□□□□ 0.56
USP39-201ENST00000323701 VIPR2P41587 438 aa18.53■□□□□ 0.56
USP39-201ENST00000323701 IRX4P78413 519 aa18.53■□□□□ 0.56
USP39-201ENST00000323701 IRF9Q00978 393 aa18.53■□□□□ 0.56
USP39-201ENST00000323701 NSUN2Q08J23 767 aaKnown RBP eCLIP18.53■□□□□ 0.56
USP39-201ENST00000323701 PITRM1Q5JRX3 1037 aa18.53■□□□□ 0.56
USP39-201ENST00000323701 PTAR1Q7Z6K3 402 aaPredicted RBP18.53■□□□□ 0.56
USP39-201ENST00000323701 ZNF75CPQ92670 426 aaPredicted RBP18.53■□□□□ 0.56
USP39-201ENST00000323701 ISL2Q96A47 359 aa18.53■□□□□ 0.56
USP39-201ENST00000323701 TBATAQ96M53 351 aa18.53■□□□□ 0.56
USP39-201ENST00000323701 PAPSS2O95340 614 aaPredicted RBP18.52■□□□□ 0.56
USP39-201ENST00000323701 CYBBP04839 570 aa18.52■□□□□ 0.56
USP39-201ENST00000323701 TYRP14679 529 aa18.52■□□□□ 0.56
USP39-201ENST00000323701 CSE1LP55060 971 aaKnown RBP18.52■□□□□ 0.56
USP39-201ENST00000323701 CAMK1DQ8IU85 385 aa18.52■□□□□ 0.56
USP39-201ENST00000323701 NAT16Q8N8M0 369 aa18.52■□□□□ 0.56
USP39-201ENST00000323701 C2CD4AQ8NCU7 369 aaPredicted RBP18.52■□□□□ 0.56
USP39-201ENST00000323701 BRSK1Q8TDC3 778 aa18.52■□□□□ 0.56
USP39-201ENST00000323701 ABHD8Q96I13 439 aa18.52■□□□□ 0.56
USP39-201ENST00000323701 IGFLR1Q9H665 355 aa18.52■□□□□ 0.56
USP39-201ENST00000323701 SPHK2Q9NRA0 654 aa18.52■□□□□ 0.56
USP39-201ENST00000323701 FBXO6Q9NRD1 293 aaPredicted RBP18.52■□□□□ 0.56
USP39-201ENST00000323701 SLC39A10Q9ULF5 831 aa18.52■□□□□ 0.56
USP39-201ENST00000323701 PRSS56P0CW18 603 aa18.52■□□□□ 0.56
USP39-201ENST00000323701 SAT1P21673 171 aa18.52■□□□□ 0.56
USP39-201ENST00000323701 SP100P23497 879 aaPredicted RBP18.52■□□□□ 0.56
USP39-201ENST00000323701 SERPINB4P48594 390 aa18.52■□□□□ 0.56
USP39-201ENST00000323701 ZNF460Q14592 562 aa18.52■□□□□ 0.56
USP39-201ENST00000323701 SLC14A2Q15849 920 aa18.52■□□□□ 0.56
USP39-201ENST00000323701 SEPT7Q16181 437 aaKnown RBP18.52■□□□□ 0.56
USP39-201ENST00000323701 TRIM68Q6AZZ1 485 aa18.52■□□□□ 0.56
USP39-201ENST00000323701 CNSTQ6PJW8 725 aa18.52■□□□□ 0.56
USP39-201ENST00000323701 ACDQ96AP0 544 aa18.52■□□□□ 0.56
USP39-201ENST00000323701 GPR22Q99680 433 aa18.52■□□□□ 0.56
USP39-201ENST00000323701 RHOJQ9H4E5 214 aa18.52■□□□□ 0.56
USP39-201ENST00000323701 EVLQ9UI08 416 aaPredicted RBP18.52■□□□□ 0.56
USP39-201ENST00000323701 FBXO5Q9UKT4 447 aa18.52■□□□□ 0.56
USP39-201ENST00000323701 CCDC85CA6NKD9 419 aa18.51■□□□□ 0.55
USP39-201ENST00000323701 PIGNO95427 931 aa18.51■□□□□ 0.55
USP39-201ENST00000323701 SLC4A1P02730 911 aa18.51■□□□□ 0.55
USP39-201ENST00000323701 ALADP13716 330 aa18.51■□□□□ 0.55
USP39-201ENST00000323701 CSRP3P50461 194 aa18.51■□□□□ 0.55
USP39-201ENST00000323701 PLK1P53350 603 aa18.51■□□□□ 0.55
USP39-201ENST00000323701 THOC5Q13769 683 aaKnown RBP18.51■□□□□ 0.55
USP39-201ENST00000323701 TMEM215Q68D42 235 aa18.51■□□□□ 0.55
USP39-201ENST00000323701 RETSATQ6NUM9 610 aa18.51■□□□□ 0.55
USP39-201ENST00000323701 RGS9BPQ6ZS82 235 aa18.51■□□□□ 0.55
USP39-201ENST00000323701 OR6P1Q8NGX9 317 aa18.51■□□□□ 0.55
USP39-201ENST00000323701 ASIC4Q96FT7 647 aa18.51■□□□□ 0.55
USP39-201ENST00000323701 THOC1Q96FV9 657 aaKnown RBP18.51■□□□□ 0.55
USP39-201ENST00000323701 GDF15Q99988 308 aa18.51■□□□□ 0.55
USP39-201ENST00000323701 IQCGQ9H095 443 aaKnown RBP18.51■□□□□ 0.55
USP39-201ENST00000323701 VPS11Q9H270 941 aa18.51■□□□□ 0.55
USP39-201ENST00000323701 ANKRD66B4E2M5 251 aa18.51■□□□□ 0.55
USP39-201ENST00000323701 LINC01565O15544 149 aa18.51■□□□□ 0.55
USP39-201ENST00000323701 PHGDHO43175 533 aaKnown RBP18.51■□□□□ 0.55
USP39-201ENST00000323701 GLP2RO95838 553 aa18.51■□□□□ 0.55
USP39-201ENST00000323701 PAMP19021 973 aa18.51■□□□□ 0.55
USP39-201ENST00000323701 BGNP21810 368 aa18.51■□□□□ 0.55
USP39-201ENST00000323701 ABL2P42684 1182 aa18.51■□□□□ 0.55
USP39-201ENST00000323701 ACVR1Q04771 509 aa18.51■□□□□ 0.55
USP39-201ENST00000323701 TCEAL5Q5H9L2 206 aa18.51■□□□□ 0.55
USP39-201ENST00000323701 N4BP2L1Q5TBK1 243 aaPredicted RBP18.51■□□□□ 0.55
USP39-201ENST00000323701 SLC41A1Q8IVJ1 513 aa18.51■□□□□ 0.55
USP39-201ENST00000323701 CEP97Q8IW35 865 aa18.51■□□□□ 0.55
USP39-201ENST00000323701 ACMSDQ8TDX5 336 aa18.51■□□□□ 0.55
USP39-201ENST00000323701 TMEM216Q9P0N5 145 aa18.51■□□□□ 0.55
USP39-201ENST00000323701 PCDHB9Q9Y5E1 797 aa18.51■□□□□ 0.55
USP39-201ENST00000323701 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.5■□□□□ 0.55
USP39-201ENST00000323701 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.5■□□□□ 0.55
USP39-201ENST00000323701 CCDC162PA2VCL2 907 aa18.5■□□□□ 0.55
USP39-201ENST00000323701 ZNF197O14709 1029 aa18.5■□□□□ 0.55
USP39-201ENST00000323701 FZD6O60353 706 aa18.5■□□□□ 0.55
USP39-201ENST00000323701 C2P06681 752 aa18.5■□□□□ 0.55
USP39-201ENST00000323701 POU2F2P09086 479 aa18.5■□□□□ 0.55
USP39-201ENST00000323701 SRCP12931 536 aa18.5■□□□□ 0.55
USP39-201ENST00000323701 SERPINB8P50452 374 aa18.5■□□□□ 0.55
USP39-201ENST00000323701 ZNF140P52738 457 aaPredicted RBP18.5■□□□□ 0.55
USP39-201ENST00000323701 SEMA3AQ14563 771 aa18.5■□□□□ 0.55
USP39-201ENST00000323701 RBM20Q5T481 1227 aaKnown RBP18.5■□□□□ 0.55
USP39-201ENST00000323701 COL13A1Q5TAT6 717 aaPredicted RBP18.5■□□□□ 0.55
USP39-201ENST00000323701 GKAP1Q5VSY0 366 aaPredicted RBP18.5■□□□□ 0.55
USP39-201ENST00000323701 LRRC8CQ8TDW0 803 aa18.5■□□□□ 0.55
USP39-201ENST00000323701 HAUS2Q9NVX0 235 aa18.5■□□□□ 0.55
USP39-201ENST00000323701 SLCO3A1Q9UIG8 710 aa18.5■□□□□ 0.55
USP39-201ENST00000323701 MTF2Q9Y483 593 aaPredicted RBP18.5■□□□□ 0.55
USP39-201ENST00000323701 ARIH1Q9Y4X5 557 aaPredicted RBP18.5■□□□□ 0.55
USP39-201ENST00000323701 A0A096LPK6 155 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms