RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 KDELC1Q6UW63 502 aa17.51■□□□□ 0.39
COL9A1-201ENST00000320755 ATAD1Q8NBU5 361 aa17.51■□□□□ 0.39
COL9A1-201ENST00000320755 BLOC1S5Q8TDH9 187 aa17.51■□□□□ 0.39
COL9A1-201ENST00000320755 B3GALT6Q96L58 329 aa17.51■□□□□ 0.39
COL9A1-201ENST00000320755 TRAPPC9Q96Q05 1148 aa17.51■□□□□ 0.39
COL9A1-201ENST00000320755 APPL1Q9UKG1 709 aa17.51■□□□□ 0.39
COL9A1-201ENST00000320755 UBDO15205 165 aa17.51■□□□□ 0.39
COL9A1-201ENST00000320755 GRIA2P42262 883 aa17.51■□□□□ 0.39
COL9A1-201ENST00000320755 OR1G1P47890 313 aa17.51■□□□□ 0.39
COL9A1-201ENST00000320755 KPNA2P52292 529 aaKnown RBP17.51■□□□□ 0.39
COL9A1-201ENST00000320755 PSME3P61289 254 aa17.51■□□□□ 0.39
COL9A1-201ENST00000320755 FASTKQ14296 549 aaKnown RBP17.51■□□□□ 0.39
COL9A1-201ENST00000320755 LPIN1Q14693 890 aa17.51■□□□□ 0.39
COL9A1-201ENST00000320755 FBXO48Q5FWF7 155 aa17.51■□□□□ 0.39
COL9A1-201ENST00000320755 RARS2Q5T160 578 aaKnown RBP17.51■□□□□ 0.39
COL9A1-201ENST00000320755 OGFRL1Q5TC84 451 aaPredicted RBP17.51■□□□□ 0.39
COL9A1-201ENST00000320755 CYP2R1Q6VVX0 501 aa17.51■□□□□ 0.39
COL9A1-201ENST00000320755 OR13J1Q8NGT2 312 aa17.51■□□□□ 0.39
COL9A1-201ENST00000320755 PDCD6IPQ8WUM4 868 aaKnown RBP17.51■□□□□ 0.39
COL9A1-201ENST00000320755 TBATAQ96M53 351 aa17.51■□□□□ 0.39
COL9A1-201ENST00000320755 SERPINB11Q96P15 392 aa17.51■□□□□ 0.39
COL9A1-201ENST00000320755 PRKD2Q9BZL6 878 aa17.51■□□□□ 0.39
COL9A1-201ENST00000320755 TRMT13Q9NUP7 481 aaKnown RBP17.51■□□□□ 0.39
COL9A1-201ENST00000320755 GMIPQ9P107 970 aa17.51■□□□□ 0.39
COL9A1-201ENST00000320755 C15orf38-AP3S2A0A0A6YYH1 394 aa17.51■□□□□ 0.39
COL9A1-201ENST00000320755 E7ENX8 843 aa17.51■□□□□ 0.39
COL9A1-201ENST00000320755 CSPG5O95196 566 aa17.51■□□□□ 0.39
COL9A1-201ENST00000320755 CTGFP29279 349 aa17.51■□□□□ 0.39
COL9A1-201ENST00000320755 ARTNQ5T4W7 220 aa17.51■□□□□ 0.39
COL9A1-201ENST00000320755 CST9Q5W186 159 aa17.51■□□□□ 0.39
COL9A1-201ENST00000320755 IYDQ6PHW0 289 aa17.51■□□□□ 0.39
COL9A1-201ENST00000320755 ARPINQ7Z6K5 226 aa17.51■□□□□ 0.39
COL9A1-201ENST00000320755 ATP6V1E2Q96A05 226 aa17.51■□□□□ 0.39
COL9A1-201ENST00000320755 SLC39A3Q9BRY0 314 aa17.51■□□□□ 0.39
COL9A1-201ENST00000320755 SPC25Q9HBM1 224 aa17.51■□□□□ 0.39
COL9A1-201ENST00000320755 C6orf203Q9P0P8 240 aaPredicted RBP17.51■□□□□ 0.39
COL9A1-201ENST00000320755 C9JVG2 144 aa17.5■□□□□ 0.39
COL9A1-201ENST00000320755 DNAJA2O60884 412 aa17.5■□□□□ 0.39
COL9A1-201ENST00000320755 ASGR1P07306 291 aa17.5■□□□□ 0.39
COL9A1-201ENST00000320755 HOXC13P31276 330 aa17.5■□□□□ 0.39
COL9A1-201ENST00000320755 CHN2P52757 468 aa17.5■□□□□ 0.39
COL9A1-201ENST00000320755 FKBP1BP68106 108 aa17.5■□□□□ 0.39
COL9A1-201ENST00000320755 PITRM1Q5JRX3 1037 aa17.5■□□□□ 0.39
COL9A1-201ENST00000320755 C6orf52Q5T4I8 152 aa17.5■□□□□ 0.39
COL9A1-201ENST00000320755 PAOXQ6QHF9 649 aa17.5■□□□□ 0.39
COL9A1-201ENST00000320755 TMEM207Q6UWW9 146 aa17.5■□□□□ 0.39
COL9A1-201ENST00000320755 SATL1Q86VE3 508 aa17.5■□□□□ 0.39
COL9A1-201ENST00000320755 LCA5Q86VQ0 697 aa17.5■□□□□ 0.39
COL9A1-201ENST00000320755 PIP4K2CQ8TBX8 421 aa17.5■□□□□ 0.39
COL9A1-201ENST00000320755 PTCD2Q8WV60 388 aaKnown RBP17.5■□□□□ 0.39
COL9A1-201ENST00000320755 SUSD3Q96L08 255 aa17.5■□□□□ 0.39
COL9A1-201ENST00000320755 CENPKQ9BS16 269 aa17.5■□□□□ 0.39
COL9A1-201ENST00000320755 IL1RL2Q9HB29 575 aa17.5■□□□□ 0.39
COL9A1-201ENST00000320755 GIMAP2Q9UG22 337 aa17.5■□□□□ 0.39
COL9A1-201ENST00000320755 PSMD12O00232 456 aaPredicted RBP17.5■□□□□ 0.39
COL9A1-201ENST00000320755 PPP6CO00743 305 aa17.5■□□□□ 0.39
COL9A1-201ENST00000320755 CASQ2O14958 399 aaPredicted RBP17.5■□□□□ 0.39
COL9A1-201ENST00000320755 ZNF623O75123 536 aa17.5■□□□□ 0.39
COL9A1-201ENST00000320755 OR6B1O95007 311 aa17.5■□□□□ 0.39
COL9A1-201ENST00000320755 CNPY1Q3B7I2 92 aa17.5■□□□□ 0.39
COL9A1-201ENST00000320755 SIRPB2Q5JXA9 342 aa17.5■□□□□ 0.39
COL9A1-201ENST00000320755 CILP2Q8IUL8 1156 aa17.5■□□□□ 0.39
COL9A1-201ENST00000320755 CALML6Q8TD86 181 aa17.5■□□□□ 0.39
COL9A1-201ENST00000320755 IGSF8Q969P0 613 aa17.5■□□□□ 0.39
COL9A1-201ENST00000320755 IMP4Q96G21 291 aaKnown RBP17.5■□□□□ 0.39
COL9A1-201ENST00000320755 ARHGAP39Q9C0H5 1083 aa17.5■□□□□ 0.39
COL9A1-201ENST00000320755 RRAGCQ9HB90 399 aa17.5■□□□□ 0.39
COL9A1-201ENST00000320755 PTGDR2Q9Y5Y4 395 aa17.5■□□□□ 0.39
COL9A1-201ENST00000320755 PEX11BO96011 259 aa17.49■□□□□ 0.39
COL9A1-201ENST00000320755 ATP6V1B1P15313 513 aa17.49■□□□□ 0.39
COL9A1-201ENST00000320755 FGFR3P22607 806 aa17.49■□□□□ 0.39
COL9A1-201ENST00000320755 HK2P52789 917 aa17.49■□□□□ 0.39
COL9A1-201ENST00000320755 ADGRE1Q14246 886 aa17.49■□□□□ 0.39
COL9A1-201ENST00000320755 NRF1Q16656 503 aa17.49■□□□□ 0.39
COL9A1-201ENST00000320755 MS4A13Q5J8X5 152 aa17.49■□□□□ 0.39
COL9A1-201ENST00000320755 KLHDC8BQ8IXV7 354 aa17.49■□□□□ 0.39
COL9A1-201ENST00000320755 UBAP1Q9NZ09 502 aa17.49■□□□□ 0.39
COL9A1-201ENST00000320755 SLC27A5Q9Y2P5 690 aa17.49■□□□□ 0.39
COL9A1-201ENST00000320755 ARL5AQ9Y689 179 aa17.49■□□□□ 0.39
COL9A1-201ENST00000320755 HTTP42858 3142 aa17.49■□□□□ 0.39
COL9A1-201ENST00000320755 NYNRINQ9P2P1 1898 aaKnown RBP17.49■□□□□ 0.39
COL9A1-201ENST00000320755 LRRC14BA6NHZ5 514 aa17.49■□□□□ 0.39
COL9A1-201ENST00000320755 TADA2AO75478 443 aa17.49■□□□□ 0.39
COL9A1-201ENST00000320755 MGAT3Q09327 533 aa17.49■□□□□ 0.39
COL9A1-201ENST00000320755 GALNT3Q14435 633 aa17.49■□□□□ 0.39
COL9A1-201ENST00000320755 IL23RQ5VWK5 629 aa17.49■□□□□ 0.39
COL9A1-201ENST00000320755 C17orf99Q6UX52 265 aa17.49■□□□□ 0.39
COL9A1-201ENST00000320755 RPRD1AQ96P16 312 aaPredicted RBP17.49■□□□□ 0.39
COL9A1-201ENST00000320755 ZYG11BQ9C0D3 744 aa17.49■□□□□ 0.39
COL9A1-201ENST00000320755 FAM192AQ9GZU8 254 aa17.49■□□□□ 0.39
COL9A1-201ENST00000320755 ZCWPW1Q9H0M4 648 aa17.49■□□□□ 0.39
COL9A1-201ENST00000320755 EML4Q9HC35 981 aaKnown RBP17.49■□□□□ 0.39
COL9A1-201ENST00000320755 RGS18Q9NS28 235 aa17.49■□□□□ 0.39
COL9A1-201ENST00000320755 GMPR2Q9P2T1 348 aaKnown RBP17.49■□□□□ 0.39
COL9A1-201ENST00000320755 TRAF6Q9Y4K3 522 aa17.49■□□□□ 0.39
COL9A1-201ENST00000320755 ANKRD12Q6UB98 2062 aa17.49■□□□□ 0.39
COL9A1-201ENST00000320755 UBFD1O14562 309 aaKnown RBP17.49■□□□□ 0.39
COL9A1-201ENST00000320755 RNASEH2AO75792 299 aaKnown RBP17.49■□□□□ 0.39
COL9A1-201ENST00000320755 SIX3O95343 332 aaPredicted RBP17.49■□□□□ 0.39
COL9A1-201ENST00000320755 POLD2P49005 469 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms