RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 PHF13Q86YI8 300 aaPredicted RBP14.36□□□□□ -0.11
RPP40-201ENST00000319533 UMODL1-AS1Q8N2C9 162 aa14.36□□□□□ -0.11
RPP40-201ENST00000319533 NEK11Q8NG66 645 aa14.36□□□□□ -0.11
RPP40-201ENST00000319533 SCG3Q8WXD2 468 aaKnown RBP14.36□□□□□ -0.11
RPP40-201ENST00000319533 HMCESQ96FZ2 354 aa14.36□□□□□ -0.11
RPP40-201ENST00000319533 PCDHB18PQ96TA0 734 aa14.36□□□□□ -0.11
RPP40-201ENST00000319533 LHX3Q9UBR4 397 aa14.36□□□□□ -0.11
RPP40-201ENST00000319533 ACSL6Q9UKU0 697 aa14.36□□□□□ -0.11
RPP40-201ENST00000319533 PIEZO2Q9H5I5 2752 aa14.35□□□□□ -0.11
RPP40-201ENST00000319533 LRRC10BA6NIK2 292 aa14.35□□□□□ -0.11
RPP40-201ENST00000319533 SIGLEC16A6NMB1 481 aa14.35□□□□□ -0.11
RPP40-201ENST00000319533 RASA4BC9J798 803 aa14.35□□□□□ -0.11
RPP40-201ENST00000319533 TMX2-CTNND1H3BSU7 103 aa14.35□□□□□ -0.11
RPP40-201ENST00000319533 INSIG1O15503 277 aa14.35□□□□□ -0.11
RPP40-201ENST00000319533 RASA4O43374 803 aa14.35□□□□□ -0.11
RPP40-201ENST00000319533 RASGRP1O95267 797 aa14.35□□□□□ -0.11
RPP40-201ENST00000319533 GPD1P21695 349 aa14.35□□□□□ -0.11
RPP40-201ENST00000319533 EPHB2P29323 1055 aa14.35□□□□□ -0.11
RPP40-201ENST00000319533 KLK7P49862 253 aa14.35□□□□□ -0.11
RPP40-201ENST00000319533 ZNF165P49910 485 aa14.35□□□□□ -0.11
RPP40-201ENST00000319533 LY6DQ14210 128 aa14.35□□□□□ -0.11
RPP40-201ENST00000319533 GRM3Q14832 879 aa14.35□□□□□ -0.11
RPP40-201ENST00000319533 NFATC4Q14934 902 aa14.35□□□□□ -0.11
RPP40-201ENST00000319533 UGP2Q16851 508 aa14.35□□□□□ -0.11
RPP40-201ENST00000319533 PYROXD2Q8N2H3 581 aa14.35□□□□□ -0.11
RPP40-201ENST00000319533 C3orf20Q8ND61 904 aa14.35□□□□□ -0.11
RPP40-201ENST00000319533 OR6C4Q8NGE1 309 aa14.35□□□□□ -0.11
RPP40-201ENST00000319533 MED8Q96G25 268 aa14.35□□□□□ -0.11
RPP40-201ENST00000319533 WRAP53Q9BUR4 548 aaKnown RBP14.35□□□□□ -0.11
RPP40-201ENST00000319533 APOOQ9BUR5 198 aa14.35□□□□□ -0.11
RPP40-201ENST00000319533 PDFQ9HBH1 243 aa14.35□□□□□ -0.11
RPP40-201ENST00000319533 ADAM22Q9P0K1 906 aa14.35□□□□□ -0.11
RPP40-201ENST00000319533 RABGEF1Q9UJ41 708 aa14.35□□□□□ -0.11
RPP40-201ENST00000319533 SIK3Q9Y2K2 1263 aa14.35□□□□□ -0.11
RPP40-201ENST00000319533 LRP4O75096 1905 aa14.35□□□□□ -0.11
RPP40-201ENST00000319533 LRRK1Q38SD2 2015 aa14.34□□□□□ -0.11
RPP40-201ENST00000319533 AHCTF1Q8WYP5 2266 aa14.34□□□□□ -0.11
RPP40-201ENST00000319533 CFAP69A5D8W1 941 aa14.34□□□□□ -0.11
RPP40-201ENST00000319533 D6RAR5 112 aa14.34□□□□□ -0.11
RPP40-201ENST00000319533 PLD2O14939 933 aa14.34□□□□□ -0.11
RPP40-201ENST00000319533 EPHB6O15197 1021 aa14.34□□□□□ -0.11
RPP40-201ENST00000319533 EFSO43281 561 aa14.34□□□□□ -0.11
RPP40-201ENST00000319533 CCKBRP32239 447 aa14.34□□□□□ -0.11
RPP40-201ENST00000319533 STAT1P42224 750 aa14.34□□□□□ -0.11
RPP40-201ENST00000319533 NSFP46459 744 aaKnown RBP14.34□□□□□ -0.11
RPP40-201ENST00000319533 ZNF143P52747 638 aaPredicted RBP14.34□□□□□ -0.11
RPP40-201ENST00000319533 AIF1P55008 147 aa14.34□□□□□ -0.11
RPP40-201ENST00000319533 CLEC16AQ2KHT3 1053 aa14.34□□□□□ -0.11
RPP40-201ENST00000319533 ZSCAN23Q3MJ62 389 aa14.34□□□□□ -0.11
RPP40-201ENST00000319533 FILIP1LQ4L180 1135 aa14.34□□□□□ -0.11
RPP40-201ENST00000319533 EFHC2Q5JST6 749 aa14.34□□□□□ -0.11
RPP40-201ENST00000319533 OGFOD3Q6PK18 319 aa14.34□□□□□ -0.11
RPP40-201ENST00000319533 CCDC81Q6ZN84 652 aa14.34□□□□□ -0.11
RPP40-201ENST00000319533 B3GNT8Q7Z7M8 397 aa14.34□□□□□ -0.11
RPP40-201ENST00000319533 DNAAF5Q86Y56 855 aa14.34□□□□□ -0.11
RPP40-201ENST00000319533 HID1Q8IV36 788 aa14.34□□□□□ -0.11
RPP40-201ENST00000319533 KYQ8NBH2 561 aa14.34□□□□□ -0.11
RPP40-201ENST00000319533 NETO2Q8NC67 525 aa14.34□□□□□ -0.11
RPP40-201ENST00000319533 GPR156Q8NFN8 814 aa14.34□□□□□ -0.11
RPP40-201ENST00000319533 PCDH19Q8TAB3 1148 aa14.34□□□□□ -0.11
RPP40-201ENST00000319533 TSACCQ96A04 125 aaPredicted RBP14.34□□□□□ -0.11
RPP40-201ENST00000319533 CCDC74AQ96AQ1 378 aa14.34□□□□□ -0.11
RPP40-201ENST00000319533 ZNF641Q96N77 438 aaPredicted RBP14.34□□□□□ -0.11
RPP40-201ENST00000319533 CCNL2Q96S94 520 aaPredicted RBP14.34□□□□□ -0.11
RPP40-201ENST00000319533 RBM15Q96T37 977 aaKnown RBP eCLIP14.34□□□□□ -0.11
RPP40-201ENST00000319533 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.34□□□□□ -0.11
RPP40-201ENST00000319533 SELENOOQ9BVL4 669 aa14.34□□□□□ -0.11
RPP40-201ENST00000319533 HSD3B7Q9H2F3 369 aa14.34□□□□□ -0.11
RPP40-201ENST00000319533 SUV39H2Q9H5I1 410 aa14.34□□□□□ -0.11
RPP40-201ENST00000319533 LRRC19Q9H756 370 aa14.34□□□□□ -0.11
RPP40-201ENST00000319533 PCDH12Q9NPG4 1184 aa14.34□□□□□ -0.11
RPP40-201ENST00000319533 NLRC4Q9NPP4 1024 aa14.34□□□□□ -0.11
RPP40-201ENST00000319533 GULP1Q9UBP9 304 aa14.34□□□□□ -0.11
RPP40-201ENST00000319533 ATXN7L1Q9ULK2 861 aaPredicted RBP14.34□□□□□ -0.11
RPP40-201ENST00000319533 FZD10Q9ULW2 581 aa14.34□□□□□ -0.11
RPP40-201ENST00000319533 COQ6Q9Y2Z9 468 aa14.34□□□□□ -0.11
RPP40-201ENST00000319533 DGKBQ9Y6T7 804 aa14.34□□□□□ -0.11
RPP40-201ENST00000319533 MYO18BQ8IUG5 2567 aa14.34□□□□□ -0.11
RPP40-201ENST00000319533 A0A1W2PQM1 296 aa14.33□□□□□ -0.12
RPP40-201ENST00000319533 SYCE3A1L190 88 aa14.33□□□□□ -0.12
RPP40-201ENST00000319533 CCP110O43303 1012 aa14.33□□□□□ -0.12
RPP40-201ENST00000319533 NOBOXO60393 691 aa14.33□□□□□ -0.12
RPP40-201ENST00000319533 PIGNO95427 931 aa14.33□□□□□ -0.12
RPP40-201ENST00000319533 CALB1P05937 261 aa14.33□□□□□ -0.12
RPP40-201ENST00000319533 ATP1A3P13637 1013 aa14.33□□□□□ -0.12
RPP40-201ENST00000319533 HTR1BP28222 390 aa14.33□□□□□ -0.12
RPP40-201ENST00000319533 HTR7P34969 479 aa14.33□□□□□ -0.12
RPP40-201ENST00000319533 MMP12P39900 470 aa14.33□□□□□ -0.12
RPP40-201ENST00000319533 CSNK1DP48730 415 aa14.33□□□□□ -0.12
RPP40-201ENST00000319533 SRP54P61011 504 aaKnown RBP14.33□□□□□ -0.12
RPP40-201ENST00000319533 TPM4P67936 248 aa14.33□□□□□ -0.12
RPP40-201ENST00000319533 MTM1Q13496 603 aa14.33□□□□□ -0.12
RPP40-201ENST00000319533 INPP5AQ14642 412 aa14.33□□□□□ -0.12
RPP40-201ENST00000319533 PPP1R15BQ5SWA1 713 aa14.33□□□□□ -0.12
RPP40-201ENST00000319533 KIAA1614Q5VZ46 1190 aa14.33□□□□□ -0.12
RPP40-201ENST00000319533 FOXR1Q6PIV2 292 aa14.33□□□□□ -0.12
RPP40-201ENST00000319533 BRAT1Q6PJG6 821 aa14.33□□□□□ -0.12
RPP40-201ENST00000319533 ENPP7Q6UWV6 458 aa14.33□□□□□ -0.12
RPP40-201ENST00000319533 MON1BQ7L1V2 547 aa14.33□□□□□ -0.12
RPP40-201ENST00000319533 RAB11FIP2Q7L804 512 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms