RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 SLC14A2Q15849 920 aa19.22■□□□□ 0.67
RTN4-201ENST00000317610 AGAP9Q5VTM2 703 aa19.22■□□□□ 0.67
RTN4-201ENST00000317610 ZNF280DQ6N043 979 aa19.22■□□□□ 0.67
RTN4-201ENST00000317610 ARHGAP36Q6ZRI8 547 aa19.22■□□□□ 0.67
RTN4-201ENST00000317610 FAM35AQ86V20 835 aa19.22■□□□□ 0.67
RTN4-201ENST00000317610 ARHGAP12Q8IWW6 846 aa19.22■□□□□ 0.67
RTN4-201ENST00000317610 ADAMTS16Q8TE57 1224 aa19.22■□□□□ 0.67
RTN4-201ENST00000317610 ZUFSPQ96AP4 578 aa19.22■□□□□ 0.67
RTN4-201ENST00000317610 ROPN1LQ96C74 230 aa19.22■□□□□ 0.67
RTN4-201ENST00000317610 TCF12Q99081 682 aa19.22■□□□□ 0.67
RTN4-201ENST00000317610 ENTPD7Q9NQZ7 604 aa19.22■□□□□ 0.67
RTN4-201ENST00000317610 SOCS2O14508 198 aa19.22■□□□□ 0.67
RTN4-201ENST00000317610 GPC4O75487 556 aa19.22■□□□□ 0.67
RTN4-201ENST00000317610 HSPA8P11142 646 aaKnown RBP19.22■□□□□ 0.67
RTN4-201ENST00000317610 NELFEP18615 380 aaKnown RBP19.22■□□□□ 0.67
RTN4-201ENST00000317610 RBM20Q5T481 1227 aaKnown RBP19.22■□□□□ 0.67
RTN4-201ENST00000317610 CYHR1Q6ZMK1 362 aa19.22■□□□□ 0.67
RTN4-201ENST00000317610 LARP4Q71RC2 724 aaKnown RBP eCLIP19.22■□□□□ 0.67
RTN4-201ENST00000317610 PPP1R2P1Q96PQ5 205 aa19.22■□□□□ 0.67
RTN4-201ENST00000317610 OLFM1Q99784 485 aa19.22■□□□□ 0.67
RTN4-201ENST00000317610 CYP4F12Q9HCS2 524 aa19.22■□□□□ 0.67
RTN4-201ENST00000317610 CHST12Q9NRB3 414 aa19.22■□□□□ 0.67
RTN4-201ENST00000317610 VPS45Q9NRW7 570 aa19.22■□□□□ 0.67
RTN4-201ENST00000317610 TMEM30AQ9NV96 361 aa19.22■□□□□ 0.67
RTN4-201ENST00000317610 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.22■□□□□ 0.67
RTN4-201ENST00000317610 PTBP2Q9UKA9 531 aaKnown RBP19.22■□□□□ 0.67
RTN4-201ENST00000317610 PIN4Q9Y237 131 aaKnown RBP19.22■□□□□ 0.67
RTN4-201ENST00000317610 TRIM64A6NGJ6 449 aa19.21■□□□□ 0.67
RTN4-201ENST00000317610 HHLA1C9JL84 531 aa19.21■□□□□ 0.67
RTN4-201ENST00000317610 TIPRLO75663 272 aa19.21■□□□□ 0.67
RTN4-201ENST00000317610 RBP1P09455 135 aa19.21■□□□□ 0.67
RTN4-201ENST00000317610 LTA4HP09960 611 aaKnown RBP19.21■□□□□ 0.67
RTN4-201ENST00000317610 CKMT2P17540 419 aa19.21■□□□□ 0.67
RTN4-201ENST00000317610 GALK1P51570 392 aa19.21■□□□□ 0.67
RTN4-201ENST00000317610 SLC7A2P52569 658 aa19.21■□□□□ 0.67
RTN4-201ENST00000317610 INTS11Q5TA45 600 aaKnown RBP19.21■□□□□ 0.67
RTN4-201ENST00000317610 SLC22A9Q8IVM8 553 aa19.21■□□□□ 0.67
RTN4-201ENST00000317610 SULF1Q8IWU6 871 aa19.21■□□□□ 0.67
RTN4-201ENST00000317610 GPATCH1Q9BRR8 931 aaKnown RBP19.21■□□□□ 0.67
RTN4-201ENST00000317610 TRMOQ9BU70 441 aa19.21■□□□□ 0.67
RTN4-201ENST00000317610 PRKD2Q9BZL6 878 aa19.21■□□□□ 0.67
RTN4-201ENST00000317610 UPF3AQ9H1J1 476 aaKnown RBP19.21■□□□□ 0.67
RTN4-201ENST00000317610 GSTO2Q9H4Y5 243 aa19.21■□□□□ 0.67
RTN4-201ENST00000317610 CCM2LQ9NUG4 571 aaPredicted RBP19.21■□□□□ 0.67
RTN4-201ENST00000317610 CHCHD3Q9NX63 227 aaKnown RBP19.21■□□□□ 0.67
RTN4-201ENST00000317610 MTF2Q9Y483 593 aaPredicted RBP19.21■□□□□ 0.67
RTN4-201ENST00000317610 PLXNB2O15031 1838 aa19.21■□□□□ 0.67
RTN4-201ENST00000317610 ZNF839A8K0R7 811 aa19.2■□□□□ 0.66
RTN4-201ENST00000317610 ZNF701M0R085 212 aaPredicted RBP19.2■□□□□ 0.66
RTN4-201ENST00000317610 AURKAO14965 403 aa19.2■□□□□ 0.66
RTN4-201ENST00000317610 ATP6V1B2P21281 511 aa19.2■□□□□ 0.66
RTN4-201ENST00000317610 NEPROQ6NW34 567 aa19.2■□□□□ 0.66
RTN4-201ENST00000317610 CTU1Q7Z7A3 348 aaKnown RBP19.2■□□□□ 0.66
RTN4-201ENST00000317610 FUNDC1Q8IVP5 155 aa19.2■□□□□ 0.66
RTN4-201ENST00000317610 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.2■□□□□ 0.66
RTN4-201ENST00000317610 ARRDC4Q8NCT1 418 aa19.2■□□□□ 0.66
RTN4-201ENST00000317610 LIN28AQ9H9Z2 209 aaKnown RBP19.2■□□□□ 0.66
RTN4-201ENST00000317610 ARHGEF38Q9NXL2 777 aa19.2■□□□□ 0.66
RTN4-201ENST00000317610 ZNHIT2Q9UHR6 403 aa19.2■□□□□ 0.66
RTN4-201ENST00000317610 TRAF6Q9Y4K3 522 aa19.2■□□□□ 0.66
RTN4-201ENST00000317610 TLL2Q9Y6L7 1015 aa19.2■□□□□ 0.66
RTN4-201ENST00000317610 hCG_2014768A0A024R1R8 64 aa19.2■□□□□ 0.66
RTN4-201ENST00000317610 SMIM35A0A1B0GVV1 85 aa19.2■□□□□ 0.66
RTN4-201ENST00000317610 BBIP1A8MTZ0 92 aa19.2■□□□□ 0.66
RTN4-201ENST00000317610 DLGAP1O14490 977 aa19.2■□□□□ 0.66
RTN4-201ENST00000317610 CLCN5P51795 746 aa19.2■□□□□ 0.66
RTN4-201ENST00000317610 CROCCP3Q8IVE0 287 aa19.2■□□□□ 0.66
RTN4-201ENST00000317610 ATPAF2Q8N5M1 289 aa19.2■□□□□ 0.66
RTN4-201ENST00000317610 FAM47BQ8NA70 645 aa19.2■□□□□ 0.66
RTN4-201ENST00000317610 CANT1Q8WVQ1 401 aa19.2■□□□□ 0.66
RTN4-201ENST00000317610 EDEM1Q92611 657 aa19.2■□□□□ 0.66
RTN4-201ENST00000317610 UBXN10Q96LJ8 280 aa19.2■□□□□ 0.66
RTN4-201ENST00000317610 ABCD2Q9UBJ2 740 aa19.2■□□□□ 0.66
RTN4-201ENST00000317610 A0A087WXM4 84 aa19.19■□□□□ 0.66
RTN4-201ENST00000317610 ADM5C9JUS6 153 aa19.19■□□□□ 0.66
RTN4-201ENST00000317610 DFFAO00273 331 aa19.19■□□□□ 0.66
RTN4-201ENST00000317610 UBFD1O14562 309 aaKnown RBP19.19■□□□□ 0.66
RTN4-201ENST00000317610 MATN3O15232 486 aa19.19■□□□□ 0.66
RTN4-201ENST00000317610 MAFKO60675 156 aa19.19■□□□□ 0.66
RTN4-201ENST00000317610 STAMBPO95630 424 aa19.19■□□□□ 0.66
RTN4-201ENST00000317610 GPX3P22352 226 aa19.19■□□□□ 0.66
RTN4-201ENST00000317610 NUP107P57740 925 aa19.19■□□□□ 0.66
RTN4-201ENST00000317610 ACAP2Q15057 778 aa19.19■□□□□ 0.66
RTN4-201ENST00000317610 RANBP10Q6VN20 620 aa19.19■□□□□ 0.66
RTN4-201ENST00000317610 TAC4Q86UU9 113 aa19.19■□□□□ 0.66
RTN4-201ENST00000317610 GPC2Q8N158 579 aa19.19■□□□□ 0.66
RTN4-201ENST00000317610 GOLM1Q8NBJ4 401 aa19.19■□□□□ 0.66
RTN4-201ENST00000317610 OR9I1Q8NGQ6 314 aa19.19■□□□□ 0.66
RTN4-201ENST00000317610 FNDC8Q8TC99 324 aa19.19■□□□□ 0.66
RTN4-201ENST00000317610 PPWD1Q96BP3 646 aaKnown RBP19.19■□□□□ 0.66
RTN4-201ENST00000317610 PCED1BQ96HM7 432 aa19.19■□□□□ 0.66
RTN4-201ENST00000317610 AQP12BA6NM10 295 aa19.19■□□□□ 0.66
RTN4-201ENST00000317610 AKAP10O43572 662 aa19.19■□□□□ 0.66
RTN4-201ENST00000317610 WISP3O95389 354 aaPredicted RBP19.19■□□□□ 0.66
RTN4-201ENST00000317610 SNAI1O95863 264 aaPredicted RBP19.19■□□□□ 0.66
RTN4-201ENST00000317610 SMPD1P17405 629 aa19.19■□□□□ 0.66
RTN4-201ENST00000317610 IMPDH1P20839 514 aa19.19■□□□□ 0.66
RTN4-201ENST00000317610 MYF6P23409 242 aa19.19■□□□□ 0.66
RTN4-201ENST00000317610 CYP2C18P33260 490 aa19.19■□□□□ 0.66
RTN4-201ENST00000317610 LEPRP48357 1165 aaKnown RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms