RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 OLIG1Q8TAK6 271 aa13.49□□□□□ -0.25
PCDHB9-201ENST00000316105 ASB2Q96Q27 587 aa13.49□□□□□ -0.25
PCDHB9-201ENST00000316105 SENP6Q9GZR1 1112 aaPredicted RBP13.49□□□□□ -0.25
PCDHB9-201ENST00000316105 CCDC90BQ9GZT6 254 aa13.49□□□□□ -0.25
PCDHB9-201ENST00000316105 AGO1Q9UL18 857 aaKnown RBP13.49□□□□□ -0.25
PCDHB9-201ENST00000316105 ARFGEF1Q9Y6D6 1849 aa13.49□□□□□ -0.25
PCDHB9-201ENST00000316105 LOXHD1Q8IVV2 1947 aa13.49□□□□□ -0.25
PCDHB9-201ENST00000316105 C9IYK1 514 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 SYNCRIPO60506 623 aaKnown RBP13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 DLDP09622 509 aaKnown RBP13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 GJA9P57773 515 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 PSME3P61289 254 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 ILF2Q12905 390 aaKnown RBP13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 ATP6AP1LQ52LC2 224 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 RALGPS1Q5JS13 557 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 SAMD4BQ5PRF9 694 aaKnown RBP13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 OR56A4Q8NGH8 313 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 SUSD3Q96L08 255 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 LMCD1Q9NZU5 365 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 EIF3LQ9Y262 564 aaKnown RBP13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 ZNF197O14709 1029 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 IPO13O94829 963 aaKnown RBP13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 SNRPB2P08579 225 aaKnown RBP13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 ZNF865P0CJ78 1059 aaPredicted RBP13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 HK2P52789 917 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 ST8SIA6P61647 398 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 SMAD3P84022 425 aaKnown RBP13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 DDX39BQ13838 428 aaKnown RBP13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 USP41Q3LFD5 358 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 PARP15Q460N3 678 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 TSTD2Q5T7W7 516 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 GANCQ8TET4 914 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 NPAS2Q99743 824 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 APPL1Q9UKG1 709 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 BTRCQ9Y297 605 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 PEX11AO75192 247 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 TACR2P21452 398 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 IL4RP24394 825 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 CCNG1P51959 295 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 BCL2L1Q07817 233 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 SQLEQ14534 574 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 TBCELQ5QJ74 424 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 METTL21CQ5VZV1 264 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 AFTPHQ6ULP2 937 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 TPGS1Q6ZTW0 290 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 KIAA0408Q6ZU52 694 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 OR7D4Q8NG98 312 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 HEXDCQ8WVB3 486 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 RTKNQ9BST9 563 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 ASPSCR1Q9BZE9 553 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 SEMA6AQ9H2E6 1030 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 SAC3D1A6NKF1 404 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 ESRRBO95718 433 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 LBPP18428 481 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 YBEYP58557 167 aaPredicted RBP13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 FUT10Q6P4F1 479 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 TTC23LQ6PF05 361 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 LRRC8DQ7L1W4 858 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 ITIH5Q86UX2 942 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 RNF217Q8TC41 542 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 SLC2A13Q96QE2 648 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 RNF208Q9H0X6 261 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 CXCL16Q9H2A7 254 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 MIOSQ9NXC5 875 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 ETAA1Q9NY74 926 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 CDH22Q9UJ99 828 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 TRAF6Q9Y4K3 522 aa13.48□□□□□ -0.25
PCDHB9-201ENST00000316105 LRRC37AA6NMS7 1700 aa13.47□□□□□ -0.25
PCDHB9-201ENST00000316105 PBX3P40426 434 aa13.47□□□□□ -0.25
PCDHB9-201ENST00000316105 LSM12Q3MHD2 195 aaKnown RBP13.47□□□□□ -0.25
PCDHB9-201ENST00000316105 CACHD1Q5VU97 1274 aa13.47□□□□□ -0.25
PCDHB9-201ENST00000316105 ELMSAN1Q6PJG2 1045 aa13.47□□□□□ -0.25
PCDHB9-201ENST00000316105 CNSTQ6PJW8 725 aa13.47□□□□□ -0.25
PCDHB9-201ENST00000316105 SCIMPQ6UWF3 145 aa13.47□□□□□ -0.25
PCDHB9-201ENST00000316105 ARHGAP36Q6ZRI8 547 aa13.47□□□□□ -0.25
PCDHB9-201ENST00000316105 FBXW8Q8N3Y1 598 aa13.47□□□□□ -0.25
PCDHB9-201ENST00000316105 NKAPQ8N5F7 415 aaKnown RBP13.47□□□□□ -0.25
PCDHB9-201ENST00000316105 OR4K2Q8NGD2 314 aa13.47□□□□□ -0.25
PCDHB9-201ENST00000316105 RIN3Q8TB24 985 aa13.47□□□□□ -0.25
PCDHB9-201ENST00000316105 FAM162AQ96A26 154 aa13.47□□□□□ -0.25
PCDHB9-201ENST00000316105 TMEM209Q96SK2 561 aa13.47□□□□□ -0.25
PCDHB9-201ENST00000316105 PAPOLBQ9NRJ5 636 aaKnown RBP13.47□□□□□ -0.25
PCDHB9-201ENST00000316105 MOSPD1Q9UJG1 213 aa13.47□□□□□ -0.25
PCDHB9-201ENST00000316105 WASF2Q9Y6W5 498 aa13.47□□□□□ -0.25
PCDHB9-201ENST00000316105 MBLAC1A4D2B0 266 aaPredicted RBP13.47□□□□□ -0.25
PCDHB9-201ENST00000316105 INPP4BO15327 924 aa13.47□□□□□ -0.25
PCDHB9-201ENST00000316105 TBL1XO60907 577 aa13.47□□□□□ -0.25
PCDHB9-201ENST00000316105 EOMESO95936 686 aa13.47□□□□□ -0.25
PCDHB9-201ENST00000316105 LPOP22079 712 aaPredicted RBP13.47□□□□□ -0.25
PCDHB9-201ENST00000316105 DBF4BQ8NFT6 615 aa13.47□□□□□ -0.25
PCDHB9-201ENST00000316105 RTP4Q96DX8 246 aa13.47□□□□□ -0.25
PCDHB9-201ENST00000316105 MS4A4AQ96JQ5 239 aa13.47□□□□□ -0.25
PCDHB9-201ENST00000316105 ACTR8Q9H981 624 aa13.47□□□□□ -0.25
PCDHB9-201ENST00000316105 CHCHD3Q9NX63 227 aaKnown RBP13.47□□□□□ -0.25
PCDHB9-201ENST00000316105 SIRPGQ9P1W8 387 aa13.47□□□□□ -0.25
PCDHB9-201ENST00000316105 ZNF711Q9Y462 761 aa13.47□□□□□ -0.25
PCDHB9-201ENST00000316105 PCDHB9Q9Y5E1 797 aa13.47□□□□□ -0.25
PCDHB9-201ENST00000316105 MYADML2A6NDP7 307 aa13.47□□□□□ -0.25
PCDHB9-201ENST00000316105 NEMP2A6NFY4 417 aa13.47□□□□□ -0.25
PCDHB9-201ENST00000316105 SYN3O14994 580 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms