RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 LIG3P49916 1009 aa17.6■□□□□ 0.41
EXOSC4-201ENST00000316052 SUOXP51687 545 aa17.6■□□□□ 0.41
EXOSC4-201ENST00000316052 AIF1P55008 147 aa17.6■□□□□ 0.41
EXOSC4-201ENST00000316052 ELP6Q0PNE2 266 aa17.6■□□□□ 0.41
EXOSC4-201ENST00000316052 INPP5AQ14642 412 aa17.6■□□□□ 0.41
EXOSC4-201ENST00000316052 CA9Q16790 459 aa17.6■□□□□ 0.41
EXOSC4-201ENST00000316052 BROXQ5VW32 411 aa17.6■□□□□ 0.41
EXOSC4-201ENST00000316052 ESRP1Q6NXG1 681 aaKnown RBP17.6■□□□□ 0.41
EXOSC4-201ENST00000316052 DCUN1D2Q6PH85 259 aa17.6■□□□□ 0.41
EXOSC4-201ENST00000316052 FOXR1Q6PIV2 292 aa17.6■□□□□ 0.41
EXOSC4-201ENST00000316052 ENPP7Q6UWV6 458 aa17.6■□□□□ 0.41
EXOSC4-201ENST00000316052 RD3Q7Z3Z2 195 aa17.6■□□□□ 0.41
EXOSC4-201ENST00000316052 IRF2BP2Q7Z5L9 587 aa17.6■□□□□ 0.41
EXOSC4-201ENST00000316052 ARFGAP1Q8N6T3 406 aa17.6■□□□□ 0.41
EXOSC4-201ENST00000316052 NCAPGQ9BPX3 1015 aa17.6■□□□□ 0.41
EXOSC4-201ENST00000316052 APOOQ9BUR5 198 aa17.6■□□□□ 0.41
EXOSC4-201ENST00000316052 DPH1Q9BZG8 443 aa17.6■□□□□ 0.41
EXOSC4-201ENST00000316052 SLC39A8Q9C0K1 460 aa17.6■□□□□ 0.41
EXOSC4-201ENST00000316052 SIRPGQ9P1W8 387 aa17.6■□□□□ 0.41
EXOSC4-201ENST00000316052 OR1A2Q9Y585 309 aa17.6■□□□□ 0.41
EXOSC4-201ENST00000316052 PCDHGA8Q9Y5G5 932 aa17.6■□□□□ 0.41
EXOSC4-201ENST00000316052 ANKRD62A6NC57 917 aa17.59■□□□□ 0.41
EXOSC4-201ENST00000316052 TMEM110-MUSTN1A8MSY1 372 aa17.59■□□□□ 0.41
EXOSC4-201ENST00000316052 CDRT15L2A8MXV6 281 aa17.59■□□□□ 0.41
EXOSC4-201ENST00000316052 NTN3O00634 580 aaPredicted RBP17.59■□□□□ 0.41
EXOSC4-201ENST00000316052 PAPOLAP51003 745 aaKnown RBP17.59■□□□□ 0.41
EXOSC4-201ENST00000316052 BLKP51451 505 aa17.59■□□□□ 0.41
EXOSC4-201ENST00000316052 NDST2P52849 883 aa17.59■□□□□ 0.41
EXOSC4-201ENST00000316052 UCNP55089 124 aa17.59■□□□□ 0.41
EXOSC4-201ENST00000316052 TPI1P60174 286 aa17.59■□□□□ 0.41
EXOSC4-201ENST00000316052 SRP54P61011 504 aaKnown RBP17.59■□□□□ 0.41
EXOSC4-201ENST00000316052 MAMLD1Q13495 774 aa17.59■□□□□ 0.41
EXOSC4-201ENST00000316052 NFATC4Q14934 902 aa17.59■□□□□ 0.41
EXOSC4-201ENST00000316052 NCAPHQ15003 741 aa17.59■□□□□ 0.41
EXOSC4-201ENST00000316052 ELOCQ15369 112 aa17.59■□□□□ 0.41
EXOSC4-201ENST00000316052 FSTL5Q8N475 847 aaPredicted RBP17.59■□□□□ 0.41
EXOSC4-201ENST00000316052 KYQ8NBH2 561 aa17.59■□□□□ 0.41
EXOSC4-201ENST00000316052 PLA2G15Q8NCC3 412 aa17.59■□□□□ 0.41
EXOSC4-201ENST00000316052 TSEN2Q8NCE0 465 aaKnown RBP17.59■□□□□ 0.41
EXOSC4-201ENST00000316052 PCDH19Q8TAB3 1148 aa17.59■□□□□ 0.41
EXOSC4-201ENST00000316052 ZNF641Q96N77 438 aaPredicted RBP17.59■□□□□ 0.41
EXOSC4-201ENST00000316052 SYT11Q9BT88 431 aa17.59■□□□□ 0.41
EXOSC4-201ENST00000316052 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.59■□□□□ 0.41
EXOSC4-201ENST00000316052 EDEM3Q9BZQ6 932 aa17.59■□□□□ 0.41
EXOSC4-201ENST00000316052 ERVH48-1M5A8F1 160 aa17.58■□□□□ 0.4
EXOSC4-201ENST00000316052 TNFSF15O95150 251 aa17.58■□□□□ 0.4
EXOSC4-201ENST00000316052 RASGRP1O95267 797 aa17.58■□□□□ 0.4
EXOSC4-201ENST00000316052 CTSEP14091 401 aa17.58■□□□□ 0.4
EXOSC4-201ENST00000316052 CDK11BP21127 795 aaKnown RBP17.58■□□□□ 0.4
EXOSC4-201ENST00000316052 MMP12P39900 470 aa17.58■□□□□ 0.4
EXOSC4-201ENST00000316052 MYL5Q02045 173 aa17.58■□□□□ 0.4
EXOSC4-201ENST00000316052 CFHR1Q03591 330 aa17.58■□□□□ 0.4
EXOSC4-201ENST00000316052 SPIDRQ14159 915 aa17.58■□□□□ 0.4
EXOSC4-201ENST00000316052 GRM3Q14832 879 aa17.58■□□□□ 0.4
EXOSC4-201ENST00000316052 AGERQ15109 404 aa17.58■□□□□ 0.4
EXOSC4-201ENST00000316052 LVRNQ6Q4G3 990 aa17.58■□□□□ 0.4
EXOSC4-201ENST00000316052 B3GNT8Q7Z7M8 397 aa17.58■□□□□ 0.4
EXOSC4-201ENST00000316052 SRLQ86TD4 932 aa17.58■□□□□ 0.4
EXOSC4-201ENST00000316052 ARL10Q8N8L6 244 aa17.58■□□□□ 0.4
EXOSC4-201ENST00000316052 ANKRD20A12PQ8NF67 263 aa17.58■□□□□ 0.4
EXOSC4-201ENST00000316052 WDR36Q8NI36 951 aaKnown RBP17.58■□□□□ 0.4
EXOSC4-201ENST00000316052 NSMCE3Q96MG7 304 aa17.58■□□□□ 0.4
EXOSC4-201ENST00000316052 PEBP4Q96S96 227 aa17.58■□□□□ 0.4
EXOSC4-201ENST00000316052 SYNDIG1Q9H7V2 258 aa17.58■□□□□ 0.4
EXOSC4-201ENST00000316052 ANO10Q9NW15 660 aa17.58■□□□□ 0.4
EXOSC4-201ENST00000316052 GPR34Q9UPC5 381 aa17.58■□□□□ 0.4
EXOSC4-201ENST00000316052 AP4E1Q9UPM8 1137 aa17.58■□□□□ 0.4
EXOSC4-201ENST00000316052 DOLKQ9UPQ8 538 aa17.58■□□□□ 0.4
EXOSC4-201ENST00000316052 ATP8A1Q9Y2Q0 1164 aa17.58■□□□□ 0.4
EXOSC4-201ENST00000316052 TMCO5BA8MYB1 307 aa17.57■□□□□ 0.4
EXOSC4-201ENST00000316052 PCCBP05166 539 aa17.57■□□□□ 0.4
EXOSC4-201ENST00000316052 ALPIP09923 528 aa17.57■□□□□ 0.4
EXOSC4-201ENST00000316052 FERP16591 822 aa17.57■□□□□ 0.4
EXOSC4-201ENST00000316052 HTR7P34969 479 aa17.57■□□□□ 0.4
EXOSC4-201ENST00000316052 CSNK1DP48730 415 aa17.57■□□□□ 0.4
EXOSC4-201ENST00000316052 CCL7P80098 99 aa17.57■□□□□ 0.4
EXOSC4-201ENST00000316052 RHDQ02161 417 aa17.57■□□□□ 0.4
EXOSC4-201ENST00000316052 VAC14Q08AM6 782 aa17.57■□□□□ 0.4
EXOSC4-201ENST00000316052 TAF1BQ53T94 588 aaPredicted RBP17.57■□□□□ 0.4
EXOSC4-201ENST00000316052 AFMIDQ63HM1 303 aa17.57■□□□□ 0.4
EXOSC4-201ENST00000316052 ERAP2Q6P179 960 aa17.57■□□□□ 0.4
EXOSC4-201ENST00000316052 BRAT1Q6PJG6 821 aa17.57■□□□□ 0.4
EXOSC4-201ENST00000316052 ARHGAP36Q6ZRI8 547 aa17.57■□□□□ 0.4
EXOSC4-201ENST00000316052 ARHGAP12Q8IWW6 846 aa17.57■□□□□ 0.4
EXOSC4-201ENST00000316052 WDR48Q8TAF3 677 aa17.57■□□□□ 0.4
EXOSC4-201ENST00000316052 SNRNP27Q8WVK2 155 aaKnown RBP17.57■□□□□ 0.4
EXOSC4-201ENST00000316052 SCG3Q8WXD2 468 aaKnown RBP17.57■□□□□ 0.4
EXOSC4-201ENST00000316052 FUBP1Q96AE4 644 aaKnown RBP17.57■□□□□ 0.4
EXOSC4-201ENST00000316052 CCDC74AQ96AQ1 378 aa17.57■□□□□ 0.4
EXOSC4-201ENST00000316052 TUBGCP5Q96RT8 1024 aa17.57■□□□□ 0.4
EXOSC4-201ENST00000316052 KCTD15Q96SI1 283 aaPredicted RBP17.57■□□□□ 0.4
EXOSC4-201ENST00000316052 DHX35Q9H5Z1 703 aaKnown RBP17.57■□□□□ 0.4
EXOSC4-201ENST00000316052 PCSK1NQ9UHG2 260 aa17.57■□□□□ 0.4
EXOSC4-201ENST00000316052 CCDC187A0A096LP49 1063 aa17.56■□□□□ 0.4
EXOSC4-201ENST00000316052 A0A1W2PQM1 296 aa17.56■□□□□ 0.4
EXOSC4-201ENST00000316052 TMEM202A6NGA9 273 aa17.56■□□□□ 0.4
EXOSC4-201ENST00000316052 ARHGAP42A6NI28 874 aa17.56■□□□□ 0.4
EXOSC4-201ENST00000316052 EEF2KO00418 725 aaKnown RBP17.56■□□□□ 0.4
EXOSC4-201ENST00000316052 TEX33O43247 280 aa17.56■□□□□ 0.4
EXOSC4-201ENST00000316052 ATMINO43313 823 aaPredicted RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms