RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 ACTR3P61158 418 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 STX3Q13277 289 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 CBX2Q14781 532 aaPredicted RBP7.67□□□□□ -1.18
TRIM55-202ENST00000315962 TRIP4Q15650 581 aaPredicted RBP7.67□□□□□ -1.18
TRIM55-202ENST00000315962 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.67□□□□□ -1.18
TRIM55-202ENST00000315962 PPM1LQ5SGD2 360 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 HECTD3Q5T447 861 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 TEDDM1Q5T9Z0 273 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 LGSNQ5TDP6 509 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 C6orf163Q5TEZ5 329 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 ZNF470Q6ECI4 717 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 RPS27LQ71UM5 84 aaKnown RBP7.67□□□□□ -1.18
TRIM55-202ENST00000315962 MAVSQ7Z434 540 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 ZNF683Q8IZ20 524 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 CARNMT1Q8N4J0 409 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 SNX31Q8N9S9 440 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 OR6Y1Q8NGX8 325 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 EZH1Q92800 747 aaPredicted RBP7.67□□□□□ -1.18
TRIM55-202ENST00000315962 USP13Q92995 863 aaPredicted RBP7.67□□□□□ -1.18
TRIM55-202ENST00000315962 LRRC39Q96DD0 335 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 PRICKLE1Q96MT3 831 aaPredicted RBP7.67□□□□□ -1.18
TRIM55-202ENST00000315962 MUC3BQ9H195 1237 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 CASS4Q9NQ75 786 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 SNX15Q9NRS6 342 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 WBP1LQ9NX94 342 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 ZNF212Q9UDV6 495 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 TRHDEQ9UKU6 1024 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 HIDE1A8MVS5 230 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 FGF10O15520 208 aaPredicted RBP7.66□□□□□ -1.18
TRIM55-202ENST00000315962 PEX1O43933 1283 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 SPAG6O75602 509 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 STC2O76061 302 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 MT-CO1P00395 513 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 URODP06132 367 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 SLC2A3P11169 496 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 COL6A1P12109 1028 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 HDCP19113 662 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 SERPINB5P36952 375 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 MAGEA11P43364 429 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 SLC18A1P54219 525 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 INHBCP55103 352 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 SLC18A2Q05940 514 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 ELAVL2Q12926 359 aaKnown RBP7.66□□□□□ -1.18
TRIM55-202ENST00000315962 CCNIQ14094 377 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 GRM3Q14832 879 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 ZRSR2Q15696 482 aaKnown RBP7.66□□□□□ -1.18
TRIM55-202ENST00000315962 LIN52Q52LA3 116 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 NAPEPLDQ6IQ20 393 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 CNKSR3Q6P9H4 555 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 FRMD7Q6ZUT3 714 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 TMEM135Q86UB9 458 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 MYLK4Q86YV6 388 aaPredicted RBP7.66□□□□□ -1.18
TRIM55-202ENST00000315962 C10orf107Q8IVU9 208 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 GALNT4Q8N4A0 578 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 PAF1Q8N7H5 531 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.66□□□□□ -1.18
TRIM55-202ENST00000315962 KLHL23Q8NBE8 558 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 FAM156AQ8NDB6 213 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 BADQ92934 168 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 TRIM62Q9BVG3 475 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 CCDC106Q9BWC9 280 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 SPATA16Q9BXB7 569 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 TM6SF2Q9BZW4 377 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 WWP1Q9H0M0 922 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 AGO1Q9UL18 857 aaKnown RBP7.66□□□□□ -1.18
TRIM55-202ENST00000315962 CLEC4EQ9ULY5 219 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 CROCCQ5TZA2 2017 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 DOCK6Q96HP0 2047 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 TSC2P49815 1807 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 GRXCR1A8MXD5 290 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 STX16-NPEPL1H3BU86 382 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 TK2O00142 265 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 AIM2O14862 343 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 CCL16O15467 120 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 HNRNPRO43390 633 aaKnown RBP7.66□□□□□ -1.18
TRIM55-202ENST00000315962 FGF18O76093 207 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 ALDH1A2O94788 518 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 SOD2P04179 222 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 CKMP06732 381 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 MLNP12872 115 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 RHOQP17081 205 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 ARNTP27540 789 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 GABRR2P28476 465 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 MZF1P28698 734 aaPredicted RBP7.66□□□□□ -1.18
TRIM55-202ENST00000315962 WEE1P30291 646 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 TUFMP49411 452 aaKnown RBP7.66□□□□□ -1.18
TRIM55-202ENST00000315962 RENBPP51606 427 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 ARSDP51689 593 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 PRMT2P55345 433 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 PKNOX1P55347 436 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 MPP3Q13368 585 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 ITGA9Q13797 1035 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 MMEL1Q495T6 779 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 FBXO48Q5FWF7 155 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 IYDQ6PHW0 289 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 C4orf22Q6V702 233 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 DHDDSQ86SQ9 333 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 TMEM150AQ86TG1 271 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 SLC41A1Q8IVJ1 513 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 MFSD6LQ8IWD5 586 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms