RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 RINLQ6ZS11 566 aa7.93□□□□□ -1.14
CDC42-201ENST00000315554 PRUNE1Q86TP1 453 aa7.93□□□□□ -1.14
CDC42-201ENST00000315554 TTC7BQ86TV6 843 aa7.93□□□□□ -1.14
CDC42-201ENST00000315554 CDKL3Q8IVW4 592 aaPredicted RBP7.93□□□□□ -1.14
CDC42-201ENST00000315554 ZNF567Q8N184 647 aa7.93□□□□□ -1.14
CDC42-201ENST00000315554 OR2T34Q8NGX1 318 aa7.93□□□□□ -1.14
CDC42-201ENST00000315554 SPATA22Q8NHS9 363 aa7.93□□□□□ -1.14
CDC42-201ENST00000315554 COG1Q8WTW3 980 aa7.93□□□□□ -1.14
CDC42-201ENST00000315554 TCEAL3Q969E4 200 aa7.93□□□□□ -1.14
CDC42-201ENST00000315554 BIRC7Q96CA5 298 aa7.93□□□□□ -1.14
CDC42-201ENST00000315554 LRIG1Q96JA1 1093 aa7.93□□□□□ -1.14
CDC42-201ENST00000315554 ZC3H10Q96K80 434 aaKnown RBP7.93□□□□□ -1.14
CDC42-201ENST00000315554 RBM15Q96T37 977 aaKnown RBP eCLIP7.93□□□□□ -1.14
CDC42-201ENST00000315554 WRAP53Q9BUR4 548 aaKnown RBP7.93□□□□□ -1.14
CDC42-201ENST00000315554 OSBPL1AQ9BXW6 950 aa7.93□□□□□ -1.14
CDC42-201ENST00000315554 HDAC8Q9BY41 377 aa7.93□□□□□ -1.14
CDC42-201ENST00000315554 CPEB1Q9BZB8 566 aaKnown RBP7.93□□□□□ -1.14
CDC42-201ENST00000315554 BRD8Q9H0E9 1235 aa7.93□□□□□ -1.14
CDC42-201ENST00000315554 CARD9Q9H257 536 aa7.93□□□□□ -1.14
CDC42-201ENST00000315554 EBF2Q9HAK2 575 aa7.93□□□□□ -1.14
CDC42-201ENST00000315554 GLOD4Q9HC38 313 aa7.93□□□□□ -1.14
CDC42-201ENST00000315554 FSCN3Q9NQT6 498 aa7.93□□□□□ -1.14
CDC42-201ENST00000315554 TMEM74BQ9NUR3 256 aa7.93□□□□□ -1.14
CDC42-201ENST00000315554 KLHL8Q9P2G9 620 aaPredicted RBP7.93□□□□□ -1.14
CDC42-201ENST00000315554 EIF2B4Q9UI10 523 aaKnown RBP7.93□□□□□ -1.14
CDC42-201ENST00000315554 GMEB2Q9UKD1 530 aa7.93□□□□□ -1.14
CDC42-201ENST00000315554 DNPEPQ9ULA0 475 aa7.93□□□□□ -1.14
CDC42-201ENST00000315554 CHKBQ9Y259 395 aa7.93□□□□□ -1.14
CDC42-201ENST00000315554 CA5BQ9Y2D0 317 aa7.93□□□□□ -1.14
CDC42-201ENST00000315554 JRKLQ9Y4A0 524 aa7.93□□□□□ -1.14
CDC42-201ENST00000315554 RAI2Q9Y5P3 530 aa7.93□□□□□ -1.14
CDC42-201ENST00000315554 FANCMQ8IYD8 2048 aa7.92□□□□□ -1.14
CDC42-201ENST00000315554 ZFHX2Q9C0A1 2572 aaPredicted RBP7.92□□□□□ -1.14
CDC42-201ENST00000315554 THADAQ6YHU6 1953 aa7.92□□□□□ -1.14
CDC42-201ENST00000315554 A0A1W2PQU0 124 aa7.92□□□□□ -1.14
CDC42-201ENST00000315554 METTL12A8MUP2 240 aa7.92□□□□□ -1.14
CDC42-201ENST00000315554 UPK3BL1B0FP48 263 aa7.92□□□□□ -1.14
CDC42-201ENST00000315554 UPK3BL2E5RIL1 263 aa7.92□□□□□ -1.14
CDC42-201ENST00000315554 PROB1E7EW31 1015 aa7.92□□□□□ -1.14
CDC42-201ENST00000315554 TRAFD1O14545 582 aaPredicted RBP7.92□□□□□ -1.14
CDC42-201ENST00000315554 FANCGO15287 622 aa7.92□□□□□ -1.14
CDC42-201ENST00000315554 EPN2O95208 641 aa7.92□□□□□ -1.14
CDC42-201ENST00000315554 MT-CYBP00156 380 aaPredicted RBP7.92□□□□□ -1.14
CDC42-201ENST00000315554 CPP00450 1065 aa7.92□□□□□ -1.14
CDC42-201ENST00000315554 PDHA1P08559 390 aa7.92□□□□□ -1.14
CDC42-201ENST00000315554 MAPK8P45983 427 aa7.92□□□□□ -1.14
CDC42-201ENST00000315554 GDF10P55107 478 aa7.92□□□□□ -1.14
CDC42-201ENST00000315554 SKOR1P84550 965 aa7.92□□□□□ -1.14
CDC42-201ENST00000315554 XRCC4Q13426 336 aa7.92□□□□□ -1.14
CDC42-201ENST00000315554 SIX1Q15475 284 aaPredicted RBP7.92□□□□□ -1.14
CDC42-201ENST00000315554 TEX44Q53QW1 395 aa7.92□□□□□ -1.14
CDC42-201ENST00000315554 KDM7AQ6ZMT4 941 aa7.92□□□□□ -1.14
CDC42-201ENST00000315554 PID1Q7Z2X4 250 aa7.92□□□□□ -1.14
CDC42-201ENST00000315554 PRPF39Q86UA1 669 aaKnown RBP7.92□□□□□ -1.14
CDC42-201ENST00000315554 C11orf74Q86VG3 221 aa7.92□□□□□ -1.14
CDC42-201ENST00000315554 SDR16C5Q8N3Y7 309 aa7.92□□□□□ -1.14
CDC42-201ENST00000315554 ZCCHC9Q8N567 271 aaKnown RBP7.92□□□□□ -1.14
CDC42-201ENST00000315554 FAM71DQ8N9W8 422 aa7.92□□□□□ -1.14
CDC42-201ENST00000315554 TTC13Q8NBP0 860 aa7.92□□□□□ -1.14
CDC42-201ENST00000315554 LPCAT1Q8NF37 534 aa7.92□□□□□ -1.14
CDC42-201ENST00000315554 SLC35B2Q8TB61 432 aa7.92□□□□□ -1.14
CDC42-201ENST00000315554 CCDC110Q8TBZ0 833 aa7.92□□□□□ -1.14
CDC42-201ENST00000315554 FATE1Q969F0 183 aa7.92□□□□□ -1.14
CDC42-201ENST00000315554 FAM131CQ96AQ9 280 aa7.92□□□□□ -1.14
CDC42-201ENST00000315554 FAM122AQ96E09 287 aa7.92□□□□□ -1.14
CDC42-201ENST00000315554 CAPZA3Q96KX2 299 aa7.92□□□□□ -1.14
CDC42-201ENST00000315554 TEKT5Q96M29 485 aa7.92□□□□□ -1.14
CDC42-201ENST00000315554 ZNF641Q96N77 438 aaPredicted RBP7.92□□□□□ -1.14
CDC42-201ENST00000315554 TUBGCP5Q96RT8 1024 aa7.92□□□□□ -1.14
CDC42-201ENST00000315554 OSBPL9Q96SU4 736 aa7.92□□□□□ -1.14
CDC42-201ENST00000315554 TMEM121Q9BTD3 319 aa7.92□□□□□ -1.14
CDC42-201ENST00000315554 AP1M1Q9BXS5 423 aa7.92□□□□□ -1.14
CDC42-201ENST00000315554 SEMA4AQ9H3S1 761 aa7.92□□□□□ -1.14
CDC42-201ENST00000315554 FZD3Q9NPG1 666 aa7.92□□□□□ -1.14
CDC42-201ENST00000315554 PCDH12Q9NPG4 1184 aa7.92□□□□□ -1.14
CDC42-201ENST00000315554 RSPH14Q9UHP6 348 aa7.92□□□□□ -1.14
CDC42-201ENST00000315554 ZFR2Q9UPR6 939 aaKnown RBP7.92□□□□□ -1.14
CDC42-201ENST00000315554 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.92□□□□□ -1.14
CDC42-201ENST00000315554 COQ6Q9Y2Z9 468 aa7.92□□□□□ -1.14
CDC42-201ENST00000315554 PCDHB9Q9Y5E1 797 aa7.92□□□□□ -1.14
CDC42-201ENST00000315554 FADS3Q9Y5Q0 445 aa7.92□□□□□ -1.14
CDC42-201ENST00000315554 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.91□□□□□ -1.14
CDC42-201ENST00000315554 TSPAN11A1L157 253 aa7.91□□□□□ -1.14
CDC42-201ENST00000315554 BCLAF3A2AJT9 711 aaKnown RBP7.91□□□□□ -1.14
CDC42-201ENST00000315554 IGLON5A6NGN9 336 aa7.91□□□□□ -1.14
CDC42-201ENST00000315554 WNT9AO14904 365 aa7.91□□□□□ -1.14
CDC42-201ENST00000315554 SLC31A1O15431 190 aa7.91□□□□□ -1.14
CDC42-201ENST00000315554 SLC7A4O43246 635 aa7.91□□□□□ -1.14
CDC42-201ENST00000315554 HTRA2O43464 458 aaPredicted RBP7.91□□□□□ -1.14
CDC42-201ENST00000315554 LIASO43766 372 aa7.91□□□□□ -1.14
CDC42-201ENST00000315554 MMP20O60882 483 aa7.91□□□□□ -1.14
CDC42-201ENST00000315554 PEX14O75381 377 aa7.91□□□□□ -1.14
CDC42-201ENST00000315554 PMPCBO75439 489 aa7.91□□□□□ -1.14
CDC42-201ENST00000315554 PGLSO95336 258 aa7.91□□□□□ -1.14
CDC42-201ENST00000315554 CFIP05156 583 aa7.91□□□□□ -1.14
CDC42-201ENST00000315554 RETP07949 1114 aa7.91□□□□□ -1.14
CDC42-201ENST00000315554 SERPINF2P08697 491 aa7.91□□□□□ -1.14
CDC42-201ENST00000315554 ALPIP09923 528 aa7.91□□□□□ -1.14
CDC42-201ENST00000315554 ETS1P14921 441 aa7.91□□□□□ -1.14
CDC42-201ENST00000315554 MSNP26038 577 aaKnown RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms