RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 RTP2Q5QGT7 225 aa13.75□□□□□ -0.21
DDX54-202ENST00000314045 GRAMD4Q6IC98 578 aa13.75□□□□□ -0.21
DDX54-202ENST00000314045 FOXR1Q6PIV2 292 aa13.75□□□□□ -0.21
DDX54-202ENST00000314045 LDB1Q86U70 411 aaPredicted RBP13.75□□□□□ -0.21
DDX54-202ENST00000314045 STYXQ8WUJ0 223 aa13.75□□□□□ -0.21
DDX54-202ENST00000314045 ELMO1Q92556 727 aa13.75□□□□□ -0.21
DDX54-202ENST00000314045 MED8Q96G25 268 aa13.75□□□□□ -0.21
DDX54-202ENST00000314045 SERAC1Q96JX3 654 aa13.75□□□□□ -0.21
DDX54-202ENST00000314045 CCDC138Q96M89 665 aa13.75□□□□□ -0.21
DDX54-202ENST00000314045 MECRQ9BV79 373 aa13.75□□□□□ -0.21
DDX54-202ENST00000314045 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.75□□□□□ -0.218e-9■■■■■ 33.2
DDX54-202ENST00000314045 DUS2Q9NX74 493 aaKnown RBP13.75□□□□□ -0.21
DDX54-202ENST00000314045 SOX13Q9UN79 622 aa13.75□□□□□ -0.21
DDX54-202ENST00000314045 STARD13Q9Y3M8 1113 aa13.75□□□□□ -0.21
DDX54-202ENST00000314045 GON4LQ3T8J9 2241 aa13.75□□□□□ -0.21
DDX54-202ENST00000314045 SRRM3A6NNA2 597 aaPredicted RBP13.75□□□□□ -0.21
DDX54-202ENST00000314045 PRMT5O14744 637 aaPredicted RBP13.75□□□□□ -0.21
DDX54-202ENST00000314045 OAZ2O95190 189 aa13.75□□□□□ -0.21
DDX54-202ENST00000314045 RAP1GDS1P52306 607 aa13.75□□□□□ -0.21
DDX54-202ENST00000314045 AP1S1P61966 158 aa13.75□□□□□ -0.21
DDX54-202ENST00000314045 RARS2Q5T160 578 aaKnown RBP13.75□□□□□ -0.21
DDX54-202ENST00000314045 ARCQ7LC44 396 aa13.75□□□□□ -0.21
DDX54-202ENST00000314045 CYP2S1Q96SQ9 504 aa13.75□□□□□ -0.21
DDX54-202ENST00000314045 SYT11Q9BT88 431 aa13.75□□□□□ -0.21
DDX54-202ENST00000314045 THUMPD3Q9BV44 507 aaKnown RBP13.75□□□□□ -0.21
DDX54-202ENST00000314045 C1QTNF7Q9BXJ2 289 aa13.75□□□□□ -0.21
DDX54-202ENST00000314045 OPTCQ9UBM4 332 aa13.75□□□□□ -0.21
DDX54-202ENST00000314045 SCOCQ9UIL1 159 aa13.75□□□□□ -0.21
DDX54-202ENST00000314045 CLCA2Q9UQC9 943 aa13.75□□□□□ -0.21
DDX54-202ENST00000314045 MYO7AQ13402 2215 aa13.74□□□□□ -0.21
DDX54-202ENST00000314045 DCXO43602 365 aa13.74□□□□□ -0.21
DDX54-202ENST00000314045 EEF1B2P24534 225 aaKnown RBP13.74□□□□□ -0.21
DDX54-202ENST00000314045 GRIA4P48058 902 aa13.74□□□□□ -0.21
DDX54-202ENST00000314045 ARL4DP49703 201 aa13.74□□□□□ -0.21
DDX54-202ENST00000314045 ZBTB6Q15916 424 aa13.74□□□□□ -0.21
DDX54-202ENST00000314045 FAM46CQ5VWP2 391 aa13.74□□□□□ -0.21
DDX54-202ENST00000314045 PPP2R2DQ66LE6 453 aa13.74□□□□□ -0.21
DDX54-202ENST00000314045 RAET1GQ6H3X3 334 aa13.74□□□□□ -0.21
DDX54-202ENST00000314045 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.74□□□□□ -0.21
DDX54-202ENST00000314045 C11orf96Q7Z7L8 435 aa13.74□□□□□ -0.21
DDX54-202ENST00000314045 COLGALT2Q8IYK4 626 aa13.74□□□□□ -0.21
DDX54-202ENST00000314045 RBFAQ8N0V3 343 aa13.74□□□□□ -0.21
DDX54-202ENST00000314045 ZNF398Q8TD17 642 aa13.74□□□□□ -0.21
DDX54-202ENST00000314045 SEMA4BQ9NPR2 832 aaPredicted RBP13.74□□□□□ -0.21
DDX54-202ENST00000314045 MFHAS1Q9Y4C4 1052 aa13.74□□□□□ -0.21
DDX54-202ENST00000314045 KIAA1551Q9HCM1 1747 aa13.74□□□□□ -0.21
DDX54-202ENST00000314045 SLC20A2Q08357 652 aa13.74□□□□□ -0.21
DDX54-202ENST00000314045 GRM3Q14832 879 aa13.74□□□□□ -0.21
DDX54-202ENST00000314045 LRRC36Q1X8D7 754 aa13.74□□□□□ -0.21
DDX54-202ENST00000314045 CLLU1OSQ5K130 101 aa13.74□□□□□ -0.21
DDX54-202ENST00000314045 POU5F2Q8N7G0 328 aa13.74□□□□□ -0.21
DDX54-202ENST00000314045 ASB2Q96Q27 587 aa13.74□□□□□ -0.21
DDX54-202ENST00000314045 ECSITQ9BQ95 431 aa13.74□□□□□ -0.21
DDX54-202ENST00000314045 KCNK4Q9NYG8 393 aa13.74□□□□□ -0.21
DDX54-202ENST00000314045 ZMYM5Q9UJ78 669 aa13.74□□□□□ -0.21
DDX54-202ENST00000314045 TNPO3Q9Y5L0 923 aaKnown RBP13.74□□□□□ -0.21
DDX54-202ENST00000314045 SLC2A4P14672 509 aa13.74□□□□□ -0.21
DDX54-202ENST00000314045 DRD4P21917 467 aa13.74□□□□□ -0.21
DDX54-202ENST00000314045 KLF1Q13351 362 aaPredicted RBP13.74□□□□□ -0.21
DDX54-202ENST00000314045 SLC1A5Q15758 541 aa13.74□□□□□ -0.21
DDX54-202ENST00000314045 TSTD2Q5T7W7 516 aa13.74□□□□□ -0.21
DDX54-202ENST00000314045 OOSP2Q86WS3 158 aa13.74□□□□□ -0.21
DDX54-202ENST00000314045 RAD9AQ99638 391 aa13.74□□□□□ -0.21
DDX54-202ENST00000314045 SYNDIG1Q9H7V2 258 aa13.74□□□□□ -0.21
DDX54-202ENST00000314045 ABCB8Q9NUT2 735 aa13.74□□□□□ -0.21
DDX54-202ENST00000314045 ILVBLA1L0T0 632 aa13.74□□□□□ -0.21
DDX54-202ENST00000314045 NR5A2O00482 541 aa13.74□□□□□ -0.21
DDX54-202ENST00000314045 HLA-DQB2P05538 268 aa13.74□□□□□ -0.21
DDX54-202ENST00000314045 ANXA5P08758 320 aa13.74□□□□□ -0.21
DDX54-202ENST00000314045 ELFN1P0C7U0 828 aa13.74□□□□□ -0.21
DDX54-202ENST00000314045 PTPN4P29074 926 aa13.74□□□□□ -0.21
DDX54-202ENST00000314045 ACVRL1P37023 503 aa13.74□□□□□ -0.21
DDX54-202ENST00000314045 FLOT2Q14254 428 aa13.74□□□□□ -0.21
DDX54-202ENST00000314045 PTK2BQ14289 1009 aa13.74□□□□□ -0.21
DDX54-202ENST00000314045 MS4A13Q5J8X5 152 aa13.74□□□□□ -0.21
DDX54-202ENST00000314045 ATXN7L2Q5T6C5 722 aaPredicted RBP13.74□□□□□ -0.21
DDX54-202ENST00000314045 LRRTM3Q86VH5 581 aa13.74□□□□□ -0.21
DDX54-202ENST00000314045 ICA1LQ8NDH6 482 aa13.74□□□□□ -0.21
DDX54-202ENST00000314045 POF1BQ8WVV4 589 aa13.74□□□□□ -0.21
DDX54-202ENST00000314045 DNAJC1Q96KC8 554 aaKnown RBP13.74□□□□□ -0.21
DDX54-202ENST00000314045 SLC2A13Q96QE2 648 aa13.74□□□□□ -0.21
DDX54-202ENST00000314045 COG4Q9H9E3 785 aa13.74□□□□□ -0.21
DDX54-202ENST00000314045 NMUR1Q9HB89 426 aa13.74□□□□□ -0.21
DDX54-202ENST00000314045 PLLPQ9Y342 182 aa13.74□□□□□ -0.21
DDX54-202ENST00000314045 J3KR12 359 aa13.73□□□□□ -0.21
DDX54-202ENST00000314045 MAP3K13O43283 966 aa13.73□□□□□ -0.21
DDX54-202ENST00000314045 PKMP14618 531 aaKnown RBP13.73□□□□□ -0.21
DDX54-202ENST00000314045 MPP1Q00013 466 aa13.73□□□□□ -0.21
DDX54-202ENST00000314045 GALNT2Q10471 571 aa13.73□□□□□ -0.21
DDX54-202ENST00000314045 PPM1JQ5JR12 505 aa13.73□□□□□ -0.21
DDX54-202ENST00000314045 KIAA1324Q6UXG2 1013 aaKnown RBP13.73□□□□□ -0.21
DDX54-202ENST00000314045 KIAA0408Q6ZU52 694 aa13.73□□□□□ -0.21
DDX54-202ENST00000314045 TDRPQ86YL5 185 aa13.73□□□□□ -0.21
DDX54-202ENST00000314045 FAM9CQ8IZT9 166 aa13.73□□□□□ -0.21
DDX54-202ENST00000314045 ACDQ96AP0 544 aa13.73□□□□□ -0.21
DDX54-202ENST00000314045 SPATA17Q96L03 361 aa13.73□□□□□ -0.21
DDX54-202ENST00000314045 SIKE1Q9BRV8 207 aa13.73□□□□□ -0.21
DDX54-202ENST00000314045 C12orf65Q9H3J6 166 aaKnown RBP13.73□□□□□ -0.21
DDX54-202ENST00000314045 POLG2Q9UHN1 485 aa13.73□□□□□ -0.21
DDX54-202ENST00000314045 LGALS13Q9UHV8 139 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms