RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 NEPROQ6NW34 567 aa13.94□□□□□ -0.18
MKS1-201ENST00000313863 ESRP1Q6NXG1 681 aaKnown RBP13.94□□□□□ -0.18
MKS1-201ENST00000313863 C8orf82Q6P1X6 216 aaPredicted RBP13.94□□□□□ -0.18
MKS1-201ENST00000313863 MYO1HQ8N1T3 1032 aa13.94□□□□□ -0.18
MKS1-201ENST00000313863 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.94□□□□□ -0.18
MKS1-201ENST00000313863 SGF29Q96ES7 293 aa13.94□□□□□ -0.18
MKS1-201ENST00000313863 ASB2Q96Q27 587 aa13.94□□□□□ -0.18
MKS1-201ENST00000313863 RANBP9Q96S59 729 aa13.94□□□□□ -0.18
MKS1-201ENST00000313863 IL12RB2Q99665 862 aa13.94□□□□□ -0.18
MKS1-201ENST00000313863 FSD1LQ9BXM9 530 aa13.94□□□□□ -0.18
MKS1-201ENST00000313863 FAM49AQ9H0Q0 323 aaPredicted RBP13.94□□□□□ -0.18
MKS1-201ENST00000313863 NOL11Q9H8H0 719 aaKnown RBP13.94□□□□□ -0.18
MKS1-201ENST00000313863 ANLNQ9NQW6 1124 aa13.94□□□□□ -0.18
MKS1-201ENST00000313863 TBC1D13Q9NVG8 400 aa13.94□□□□□ -0.18
MKS1-201ENST00000313863 GJD2Q9UKL4 321 aa13.94□□□□□ -0.18
MKS1-201ENST00000313863 NDUFAF1Q9Y375 327 aa13.94□□□□□ -0.18
MKS1-201ENST00000313863 CROCCQ5TZA2 2017 aa13.93□□□□□ -0.18
MKS1-201ENST00000313863 TRIM64CA6NLI5 447 aa13.93□□□□□ -0.18
MKS1-201ENST00000313863 A8MT66 165 aa13.93□□□□□ -0.18
MKS1-201ENST00000313863 TNPO2O14787 897 aaKnown RBP13.93□□□□□ -0.18
MKS1-201ENST00000313863 HOXD8P13378 290 aaPredicted RBP13.93□□□□□ -0.18
MKS1-201ENST00000313863 SLC26A3P40879 764 aa13.93□□□□□ -0.18
MKS1-201ENST00000313863 LHX1P48742 406 aa13.93□□□□□ -0.18
MKS1-201ENST00000313863 EMP3P54852 163 aa13.93□□□□□ -0.18
MKS1-201ENST00000313863 RALGDSQ12967 914 aa13.93□□□□□ -0.18
MKS1-201ENST00000313863 CSHL1Q14406 222 aa13.93□□□□□ -0.18
MKS1-201ENST00000313863 NHSL2Q5HYW2 709 aa13.93□□□□□ -0.18
MKS1-201ENST00000313863 TIGD7Q6NT04 549 aaPredicted RBP13.93□□□□□ -0.18
MKS1-201ENST00000313863 MFSD6LQ8IWD5 586 aa13.93□□□□□ -0.18
MKS1-201ENST00000313863 TMEM86AQ8N2M4 240 aa13.93□□□□□ -0.18
MKS1-201ENST00000313863 FIBCD1Q8N539 461 aa13.93□□□□□ -0.18
MKS1-201ENST00000313863 TFAP2CQ92754 450 aa13.93□□□□□ -0.18
MKS1-201ENST00000313863 RNF34Q969K3 372 aa13.93□□□□□ -0.18
MKS1-201ENST00000313863 C9orf16Q9BUW7 83 aa13.93□□□□□ -0.18
MKS1-201ENST00000313863 OSBPL6Q9BZF3 934 aa13.93□□□□□ -0.18
MKS1-201ENST00000313863 CHST12Q9NRB3 414 aa13.93□□□□□ -0.18
MKS1-201ENST00000313863 TREX1Q9NSU2 369 aa13.93□□□□□ -0.18
MKS1-201ENST00000313863 KLK14Q9P0G3 267 aa13.93□□□□□ -0.18
MKS1-201ENST00000313863 ZNHIT2Q9UHR6 403 aa13.93□□□□□ -0.18
MKS1-201ENST00000313863 PIN4Q9Y237 131 aaKnown RBP13.93□□□□□ -0.18
MKS1-201ENST00000313863 FIS1Q9Y3D6 152 aa13.93□□□□□ -0.18
MKS1-201ENST00000313863 TRAF6Q9Y4K3 522 aa13.93□□□□□ -0.18
MKS1-201ENST00000313863 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.93□□□□□ -0.18
MKS1-201ENST00000313863 SMIM35A0A1B0GVV1 85 aa13.92□□□□□ -0.18
MKS1-201ENST00000313863 DFFAO00273 331 aa13.92□□□□□ -0.18
MKS1-201ENST00000313863 FGF10O15520 208 aaPredicted RBP13.92□□□□□ -0.18
MKS1-201ENST00000313863 CLASP2O75122 1294 aaKnown RBP13.92□□□□□ -0.18
MKS1-201ENST00000313863 FCGR1AP12314 374 aa13.92□□□□□ -0.18
MKS1-201ENST00000313863 FGFR3P22607 806 aa13.92□□□□□ -0.18
MKS1-201ENST00000313863 MYF6P23409 242 aa13.92□□□□□ -0.18
MKS1-201ENST00000313863 ATP6V0D1P61421 351 aa13.92□□□□□ -0.18
MKS1-201ENST00000313863 PRKCQQ04759 706 aa13.92□□□□□ -0.18
MKS1-201ENST00000313863 TMED1Q13445 227 aa13.92□□□□□ -0.18
MKS1-201ENST00000313863 ZNF792Q3KQV3 632 aa13.92□□□□□ -0.18
MKS1-201ENST00000313863 C6orf10Q5SRN2 563 aa13.92□□□□□ -0.18
MKS1-201ENST00000313863 BTBD8Q5XKL5 378 aa13.92□□□□□ -0.18
MKS1-201ENST00000313863 TTC33Q6PID6 262 aaPredicted RBP13.92□□□□□ -0.18
MKS1-201ENST00000313863 CYP2R1Q6VVX0 501 aa13.92□□□□□ -0.18
MKS1-201ENST00000313863 ZNF467Q7Z7K2 595 aaPredicted RBP13.92□□□□□ -0.18
MKS1-201ENST00000313863 GALNT7Q86SF2 657 aa13.92□□□□□ -0.18
MKS1-201ENST00000313863 FAM35AQ86V20 835 aa13.92□□□□□ -0.18
MKS1-201ENST00000313863 HMGCLL1Q8TB92 370 aa13.92□□□□□ -0.18
MKS1-201ENST00000313863 USP33Q8TEY7 942 aa13.92□□□□□ -0.18
MKS1-201ENST00000313863 CELF6Q96J87 481 aaKnown RBP13.92□□□□□ -0.18
MKS1-201ENST00000313863 PLEKHG4BQ96PX9 1271 aa13.92□□□□□ -0.18
MKS1-201ENST00000313863 OSMRQ99650 979 aa13.92□□□□□ -0.18
MKS1-201ENST00000313863 SLC29A1Q99808 456 aa13.92□□□□□ -0.18
MKS1-201ENST00000313863 MUC13Q9H3R2 512 aa13.92□□□□□ -0.18
MKS1-201ENST00000313863 CATSPERBQ9H7T0 1116 aa13.92□□□□□ -0.18
MKS1-201ENST00000313863 CD320Q9NPF0 282 aa13.92□□□□□ -0.18
MKS1-201ENST00000313863 CCM2LQ9NUG4 571 aaPredicted RBP13.92□□□□□ -0.18
MKS1-201ENST00000313863 ZNF839A8K0R7 811 aa13.92□□□□□ -0.18
MKS1-201ENST00000313863 I6L893 689 aaPredicted RBP13.92□□□□□ -0.18
MKS1-201ENST00000313863 MATN3O15232 486 aa13.92□□□□□ -0.18
MKS1-201ENST00000313863 MMP3P08254 477 aa13.92□□□□□ -0.18
MKS1-201ENST00000313863 USP17L7P0C7H9 530 aa13.92□□□□□ -0.18
MKS1-201ENST00000313863 IMPDH1P20839 514 aa13.92□□□□□ -0.18
MKS1-201ENST00000313863 PSMA4P25789 261 aaKnown RBP13.92□□□□□ -0.18
MKS1-201ENST00000313863 ARNTP27540 789 aa13.92□□□□□ -0.18
MKS1-201ENST00000313863 ADRA1AP35348 466 aa13.92□□□□□ -0.18
MKS1-201ENST00000313863 SLC7A2P52569 658 aa13.92□□□□□ -0.18
MKS1-201ENST00000313863 C1QTNF8P60827 252 aa13.92□□□□□ -0.18
MKS1-201ENST00000313863 SOX4Q06945 474 aaPredicted RBP13.92□□□□□ -0.18
MKS1-201ENST00000313863 TMEM62Q0P6H9 643 aa13.92□□□□□ -0.18
MKS1-201ENST00000313863 SLC14A2Q15849 920 aa13.92□□□□□ -0.18
MKS1-201ENST00000313863 WSCD1Q658N2 575 aa13.92□□□□□ -0.18
MKS1-201ENST00000313863 DENND5AQ6IQ26 1287 aa13.92□□□□□ -0.18
MKS1-201ENST00000313863 HMBOX1Q6NT76 420 aa13.92□□□□□ -0.18
MKS1-201ENST00000313863 RWDD4Q6NW29 188 aaKnown RBP13.92□□□□□ -0.18
MKS1-201ENST00000313863 LRRC49Q8IUZ0 686 aa13.92□□□□□ -0.18
MKS1-201ENST00000313863 COLGALT2Q8IYK4 626 aa13.92□□□□□ -0.18
MKS1-201ENST00000313863 ANKRD13AQ8IZ07 590 aa13.92□□□□□ -0.18
MKS1-201ENST00000313863 SPATA6LQ8N4H0 392 aa13.92□□□□□ -0.18
MKS1-201ENST00000313863 FAM47BQ8NA70 645 aa13.92□□□□□ -0.18
MKS1-201ENST00000313863 SPATA22Q8NHS9 363 aa13.92□□□□□ -0.18
MKS1-201ENST00000313863 FNDC8Q8TC99 324 aa13.92□□□□□ -0.18
MKS1-201ENST00000313863 ADAMTS16Q8TE57 1224 aa13.92□□□□□ -0.18
MKS1-201ENST00000313863 SLC45A3Q96JT2 553 aa13.92□□□□□ -0.18
MKS1-201ENST00000313863 GID8Q9NWU2 228 aa13.92□□□□□ -0.18
MKS1-201ENST00000313863 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms