RNA–Protein interactions for RNA: ENST00000313654.13

LAMA3-202, Transcript of laminin subunit alpha 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA3, Length 10,661 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-202ENST00000313654 TP53INP1Q96A56 240 aa12.87□□□□□ -0.35
LAMA3-202ENST00000313654 NUDT15Q9NV35 164 aa12.87□□□□□ -0.35
LAMA3-202ENST00000313654 A0A1W2PQJ5 194 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 KIAA0391O15091 583 aaKnown RBP12.86□□□□□ -0.35
LAMA3-202ENST00000313654 HLA-DRAP01903 254 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 FMO4P31512 558 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 AMPD2Q01433 879 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 AIMP2Q13155 320 aaKnown RBP12.86□□□□□ -0.35
LAMA3-202ENST00000313654 SNX20Q7Z614 316 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 SLC7A6OSQ96CW6 309 aaPredicted RBP12.86□□□□□ -0.35
LAMA3-202ENST00000313654 ZNF607Q96SK3 696 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 SLC25A3Q00325 362 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 CRY1Q16526 586 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 ADNP2Q6IQ32 1131 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 SLC22A4Q9H015 551 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 ALDH8A1Q9H2A2 487 aaPredicted RBP12.86□□□□□ -0.35
LAMA3-202ENST00000313654 COL17A1Q9UMD9 1497 aaPredicted RBP12.86□□□□□ -0.35
LAMA3-202ENST00000313654 CYP17A1P05093 508 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 TMEM253P0C7T8 217 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 RPA3P35244 121 aaPredicted RBP12.86□□□□□ -0.35
LAMA3-202ENST00000313654 FAM91A1Q658Y4 838 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 KLHL35Q6PF15 583 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 KYAT3Q6YP21 454 aaKnown RBP12.86□□□□□ -0.35
LAMA3-202ENST00000313654 CHST15Q7LFX5 561 aaPredicted RBP12.86□□□□□ -0.35
LAMA3-202ENST00000313654 ZNF227Q86WZ6 799 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 SNIP1Q8TAD8 396 aaKnown RBP12.86□□□□□ -0.35
LAMA3-202ENST00000313654 MCOLN3Q8TDD5 553 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 RPRD1AQ96P16 312 aaPredicted RBP12.86□□□□□ -0.35
LAMA3-202ENST00000313654 THAP2Q9H0W7 228 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 TUBB1Q9H4B7 451 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 CDHR5Q9HBB8 845 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 FAM86C2PA6NEL3 165 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 M0QYT0 321 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 ZNF627Q7L945 461 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 GHDCQ8N2G8 530 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 GALNT15Q8N3T1 639 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 GTPBP2Q9BX10 602 aaKnown RBP12.86□□□□□ -0.35
LAMA3-202ENST00000313654 OPTCQ9UBM4 332 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 EDC4Q6P2E9 1401 aaKnown RBP12.86□□□□□ -0.35
LAMA3-202ENST00000313654 MAGEB16A2A368 324 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 ZNF730Q6ZMV8 503 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 SLFN11Q7Z7L1 901 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 COQ8AQ8NI60 647 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 CSH1P0DML2 217 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 CSH2P0DML3 217 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 F8A1P23610 371 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 ZNF844Q08AG5 666 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 ACOX1Q15067 660 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 NOL9Q5SY16 702 aaKnown RBP12.86□□□□□ -0.35
LAMA3-202ENST00000313654 ARMC5Q96C12 935 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 CHD5Q8TDI0 1954 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 TSTD3H0UI37 97 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 KCNQ3O43525 872 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 FAM86B2P0C5J1 330 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 HOXC8P31273 242 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 LUMP51884 338 aaPredicted RBP12.86□□□□□ -0.35
LAMA3-202ENST00000313654 ZNF782Q6ZMW2 699 aaPredicted RBP12.86□□□□□ -0.35
LAMA3-202ENST00000313654 TMEM179Q6ZVK1 233 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 CNPPD1Q9BV87 410 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 DBNDD1Q9H9R9 158 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 RAVER2Q9HCJ3 691 aaKnown RBP12.86□□□□□ -0.35
LAMA3-202ENST00000313654 RIPK2O43353 540 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 LINGO3P0C6S8 592 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 SAGP10523 405 aaPredicted RBP12.86□□□□□ -0.35
LAMA3-202ENST00000313654 ACSM2AQ08AH3 577 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 ACSM2BQ68CK6 577 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 CRELD2Q6UXH1 353 aaPredicted RBP12.86□□□□□ -0.35
LAMA3-202ENST00000313654 NXPE2Q96DL1 559 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 STAP2Q9UGK3 403 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 MAP2P11137 1827 aaKnown RBP12.86□□□□□ -0.35
LAMA3-202ENST00000313654 ABCC2Q92887 1545 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 MEA1Q16626 185 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 RAD9BQ6WBX8 426 aa12.86□□□□□ -0.35
LAMA3-202ENST00000313654 USP17L10C9JJH3 530 aa12.85□□□□□ -0.35
LAMA3-202ENST00000313654 CLPXO76031 633 aa12.85□□□□□ -0.35
LAMA3-202ENST00000313654 TMED8Q6PL24 325 aaPredicted RBP12.85□□□□□ -0.35
LAMA3-202ENST00000313654 CYP4X1Q8N118 509 aa12.85□□□□□ -0.35
LAMA3-202ENST00000313654 NIF3L1Q9GZT8 377 aa12.85□□□□□ -0.35
LAMA3-202ENST00000313654 TBC1D13Q9NVG8 400 aa12.85□□□□□ -0.35
LAMA3-202ENST00000313654 FXR1P51114 621 aaKnown RBP eCLIP12.85□□□□□ -0.35
LAMA3-202ENST00000313654 C1QBPQ07021 282 aaKnown RBP12.85□□□□□ -0.35
LAMA3-202ENST00000313654 DOK6Q6PKX4 331 aa12.85□□□□□ -0.35
LAMA3-202ENST00000313654 ZNF550Q7Z398 422 aa12.85□□□□□ -0.35
LAMA3-202ENST00000313654 SH3RF3Q8TEJ3 882 aaPredicted RBP12.85□□□□□ -0.35
LAMA3-202ENST00000313654 C7orf50Q9BRJ6 194 aaKnown RBP12.85□□□□□ -0.35
LAMA3-202ENST00000313654 ZFP14Q9HCL3 533 aa12.85□□□□□ -0.35
LAMA3-202ENST00000313654 SEMA4BQ9NPR2 832 aaPredicted RBP12.85□□□□□ -0.35
LAMA3-202ENST00000313654 OR6C70A6NIJ9 312 aa12.85□□□□□ -0.35
LAMA3-202ENST00000313654 TOB2Q14106 344 aaPredicted RBP12.85□□□□□ -0.35
LAMA3-202ENST00000313654 SNAPC1Q16533 368 aa12.85□□□□□ -0.35
LAMA3-202ENST00000313654 MPPE1Q53F39 396 aa12.85□□□□□ -0.35
LAMA3-202ENST00000313654 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.85□□□□□ -0.35
LAMA3-202ENST00000313654 REEP2Q9BRK0 252 aa12.85□□□□□ -0.35
LAMA3-202ENST00000313654 B3GNT4Q9C0J1 378 aa12.85□□□□□ -0.35
LAMA3-202ENST00000313654 TPP1O14773 563 aa12.85□□□□□ -0.35
LAMA3-202ENST00000313654 VAMP1P23763 118 aa12.85□□□□□ -0.35
LAMA3-202ENST00000313654 WEE1P30291 646 aa12.85□□□□□ -0.35
LAMA3-202ENST00000313654 TMEM62Q0P6H9 643 aa12.85□□□□□ -0.35
LAMA3-202ENST00000313654 DNAAF1Q8NEP3 725 aa12.85□□□□□ -0.35
LAMA3-202ENST00000313654 ZFP3Q96NJ6 502 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms