RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 TSNARE1Q96NA8 513 aa18.15■□□□□ 0.5
SPSB4-201ENST00000310546 ARPC5LQ9BPX5 153 aa18.15■□□□□ 0.5
SPSB4-201ENST00000310546 ATP13A3Q9H7F0 1226 aa18.15■□□□□ 0.5
SPSB4-201ENST00000310546 MFHAS1Q9Y4C4 1052 aa18.15■□□□□ 0.5
SPSB4-201ENST00000310546 A0A1W2PQ67 120 aa18.15■□□□□ 0.5
SPSB4-201ENST00000310546 XYLBO75191 536 aa18.15■□□□□ 0.5
SPSB4-201ENST00000310546 BCAS1O75363 584 aaPredicted RBP18.15■□□□□ 0.5
SPSB4-201ENST00000310546 SNRPB2P08579 225 aaKnown RBP18.15■□□□□ 0.5
SPSB4-201ENST00000310546 MAGEA12P43365 314 aa18.15■□□□□ 0.5
SPSB4-201ENST00000310546 DUOXA2Q1HG44 320 aa18.15■□□□□ 0.5
SPSB4-201ENST00000310546 LBX2Q6XYB7 198 aa18.15■□□□□ 0.5
SPSB4-201ENST00000310546 MMAAQ8IVH4 418 aaKnown RBP18.15■□□□□ 0.5
SPSB4-201ENST00000310546 TMEM130Q8N3G9 435 aa18.15■□□□□ 0.5
SPSB4-201ENST00000310546 HTR3CQ8WXA8 447 aa18.15■□□□□ 0.5
SPSB4-201ENST00000310546 LRCH3Q96II8 777 aa18.15■□□□□ 0.5
SPSB4-201ENST00000310546 FAR2Q96K12 515 aa18.15■□□□□ 0.5
SPSB4-201ENST00000310546 TWNKQ96RR1 684 aa18.15■□□□□ 0.5
SPSB4-201ENST00000310546 IL12RB2Q99665 862 aa18.15■□□□□ 0.5
SPSB4-201ENST00000310546 WDR12Q9GZL7 423 aaKnown RBP18.15■□□□□ 0.5
SPSB4-201ENST00000310546 PORCNQ9H237 461 aa18.15■□□□□ 0.5
SPSB4-201ENST00000310546 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.15■□□□□ 0.5
SPSB4-201ENST00000310546 MTRRQ9UBK8 725 aa18.15■□□□□ 0.5
SPSB4-201ENST00000310546 RUVBL2Q9Y230 463 aaKnown RBP18.15■□□□□ 0.5
SPSB4-201ENST00000310546 WDR81Q562E7 1941 aa18.15■□□□□ 0.5
SPSB4-201ENST00000310546 UBDO15205 165 aa18.14■□□□□ 0.49
SPSB4-201ENST00000310546 GPC4O75487 556 aa18.14■□□□□ 0.49
SPSB4-201ENST00000310546 RASAL1O95294 804 aa18.14■□□□□ 0.49
SPSB4-201ENST00000310546 SBK3P0C264 359 aa18.14■□□□□ 0.49
SPSB4-201ENST00000310546 MLNP12872 115 aa18.14■□□□□ 0.49
SPSB4-201ENST00000310546 OAZ1P54368 228 aa18.14■□□□□ 0.49
SPSB4-201ENST00000310546 INPP5AQ14642 412 aa18.14■□□□□ 0.49
SPSB4-201ENST00000310546 SLCO6A1Q86UG4 719 aa18.14■□□□□ 0.49
SPSB4-201ENST00000310546 SLC22A16Q86VW1 577 aa18.14■□□□□ 0.49
SPSB4-201ENST00000310546 SFRP1Q8N474 314 aa18.14■□□□□ 0.49
SPSB4-201ENST00000310546 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.14■□□□□ 0.49
SPSB4-201ENST00000310546 MUS81Q96NY9 551 aa18.14■□□□□ 0.49
SPSB4-201ENST00000310546 PPP1R16BQ96T49 567 aa18.14■□□□□ 0.49
SPSB4-201ENST00000310546 TP63Q9H3D4 680 aaPredicted RBP18.14■□□□□ 0.49
SPSB4-201ENST00000310546 TBC1D13Q9NVG8 400 aa18.14■□□□□ 0.49
SPSB4-201ENST00000310546 NRP2O60462 931 aa18.14■□□□□ 0.49
SPSB4-201ENST00000310546 RPS9P46781 194 aaKnown RBP18.14■□□□□ 0.49
SPSB4-201ENST00000310546 CCT8P50990 548 aa18.14■□□□□ 0.49
SPSB4-201ENST00000310546 OSTNP61366 133 aa18.14■□□□□ 0.49
SPSB4-201ENST00000310546 PRKCEQ02156 737 aa18.14■□□□□ 0.49
SPSB4-201ENST00000310546 POLD3Q15054 466 aaPredicted RBP18.14■□□□□ 0.49
SPSB4-201ENST00000310546 MAPRE2Q15555 327 aa18.14■□□□□ 0.49
SPSB4-201ENST00000310546 ATP6AP1Q15904 470 aa18.14■□□□□ 0.49
SPSB4-201ENST00000310546 CCDC14Q49A88 953 aa18.14■□□□□ 0.49
SPSB4-201ENST00000310546 NOL9Q5SY16 702 aaKnown RBP18.14■□□□□ 0.49
SPSB4-201ENST00000310546 OTUD3Q5T2D3 398 aaPredicted RBP18.14■□□□□ 0.49
SPSB4-201ENST00000310546 ATAD3BQ5T9A4 648 aa18.14■□□□□ 0.49
SPSB4-201ENST00000310546 BROXQ5VW32 411 aa18.14■□□□□ 0.49
SPSB4-201ENST00000310546 FAM219BQ5XKK7 198 aa18.14■□□□□ 0.49
SPSB4-201ENST00000310546 XAF1Q6GPH4 301 aa18.14■□□□□ 0.49
SPSB4-201ENST00000310546 PLEKHG7Q6ZR37 379 aa18.14■□□□□ 0.49
SPSB4-201ENST00000310546 ITIH5Q86UX2 942 aa18.14■□□□□ 0.49
SPSB4-201ENST00000310546 ZCCHC7Q8N3Z6 543 aaKnown RBP18.14■□□□□ 0.49
SPSB4-201ENST00000310546 ANKRD52Q8NB46 1076 aa18.14■□□□□ 0.49
SPSB4-201ENST00000310546 KCTD4Q8WVF5 259 aa18.14■□□□□ 0.49
SPSB4-201ENST00000310546 CNDP2Q96KP4 475 aaKnown RBP18.14■□□□□ 0.49
SPSB4-201ENST00000310546 FUNDC2Q9BWH2 189 aa18.14■□□□□ 0.49
SPSB4-201ENST00000310546 IL22Q9GZX6 179 aa18.14■□□□□ 0.49
SPSB4-201ENST00000310546 GDAP2Q9NXN4 497 aa18.14■□□□□ 0.49
SPSB4-201ENST00000310546 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.14■□□□□ 0.49
SPSB4-201ENST00000310546 RBPJLQ9UBG7 517 aa18.14■□□□□ 0.49
SPSB4-201ENST00000310546 MID2Q9UJV3 735 aa18.14■□□□□ 0.49
SPSB4-201ENST00000310546 ADAM28Q9UKQ2 775 aa18.14■□□□□ 0.49
SPSB4-201ENST00000310546 PTPRFP10586 1907 aa18.14■□□□□ 0.49
SPSB4-201ENST00000310546 SCN4AP35499 1836 aa18.13■□□□□ 0.49
SPSB4-201ENST00000310546 CCDC78A2IDD5 438 aa18.13■□□□□ 0.49
SPSB4-201ENST00000310546 TRPC5OSA6NMA1 111 aa18.13■□□□□ 0.49
SPSB4-201ENST00000310546 DDHD2O94830 711 aa18.13■□□□□ 0.49
SPSB4-201ENST00000310546 PSMB4P28070 264 aa18.13■□□□□ 0.49
SPSB4-201ENST00000310546 HK2P52789 917 aa18.13■□□□□ 0.49
SPSB4-201ENST00000310546 TRIM32Q13049 653 aa18.13■□□□□ 0.49
SPSB4-201ENST00000310546 PAGE2BQ5JRK9 111 aa18.13■□□□□ 0.49
SPSB4-201ENST00000310546 PPP2R2DQ66LE6 453 aa18.13■□□□□ 0.49
SPSB4-201ENST00000310546 FAM183BPQ6ZVS7 135 aa18.13■□□□□ 0.49
SPSB4-201ENST00000310546 WDR49Q8IV35 697 aa18.13■□□□□ 0.49
SPSB4-201ENST00000310546 HTRA1Q92743 480 aa18.13■□□□□ 0.49
SPSB4-201ENST00000310546 NAT9Q9BTE0 207 aa18.13■□□□□ 0.49
SPSB4-201ENST00000310546 PDLIM7Q9NR12 457 aa18.13■□□□□ 0.49
SPSB4-201ENST00000310546 A0A0A0MRY4 1105 aa18.13■□□□□ 0.49
SPSB4-201ENST00000310546 ACOX3O15254 700 aa18.13■□□□□ 0.49
SPSB4-201ENST00000310546 CABYRO75952 493 aa18.13■□□□□ 0.49
SPSB4-201ENST00000310546 SERPINB1P30740 379 aa18.13■□□□□ 0.49
SPSB4-201ENST00000310546 RGS7P49802 495 aa18.13■□□□□ 0.49
SPSB4-201ENST00000310546 EMC2Q15006 297 aa18.13■□□□□ 0.49
SPSB4-201ENST00000310546 FAM209AQ5JX71 171 aa18.13■□□□□ 0.49
SPSB4-201ENST00000310546 TMTC4Q5T4D3 741 aa18.13■□□□□ 0.49
SPSB4-201ENST00000310546 FSTL5Q8N475 847 aaPredicted RBP18.13■□□□□ 0.49
SPSB4-201ENST00000310546 ATP6V0D2Q8N8Y2 350 aa18.13■□□□□ 0.49
SPSB4-201ENST00000310546 CALML6Q8TD86 181 aa18.13■□□□□ 0.49
SPSB4-201ENST00000310546 COPS5Q92905 334 aa18.13■□□□□ 0.49
SPSB4-201ENST00000310546 VPS39Q96JC1 886 aa18.13■□□□□ 0.49
SPSB4-201ENST00000310546 SPATA13Q96N96 652 aa18.13■□□□□ 0.49
SPSB4-201ENST00000310546 TRIM8Q9BZR9 551 aa18.13■□□□□ 0.49
SPSB4-201ENST00000310546 MRPL46Q9H2W6 279 aaKnown RBP18.13■□□□□ 0.49
SPSB4-201ENST00000310546 SCUBE2Q9NQ36 999 aa18.13■□□□□ 0.49
SPSB4-201ENST00000310546 V9GYQ6 96 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms