RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 EN2P19622 333 aaPredicted RBP8.23□□□□□ -1.09
VPS41-202ENST00000310301 PSEN1P49768 467 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 BCAT1P54687 386 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 HSF2Q03933 536 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 CCDC157Q569K6 752 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 ALYREFQ86V81 257 aaKnown RBP8.23□□□□□ -1.09
VPS41-202ENST00000310301 PIWIL2Q8TC59 973 aaKnown RBP8.23□□□□□ -1.09
VPS41-202ENST00000310301 SMARCD1Q96GM5 515 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 PURBQ96QR8 312 aaKnown RBP8.23□□□□□ -1.09
VPS41-202ENST00000310301 KLHL28Q9NXS3 571 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 DNPEPQ9ULA0 475 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 COG5Q9UP83 839 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 BAIAP2Q9UQB8 552 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 ACO1P21399 889 aaKnown RBP8.23□□□□□ -1.09
VPS41-202ENST00000310301 GRM5P41594 1212 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 RAB25P57735 213 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 DLG4P78352 724 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 PARP6Q2NL67 630 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 MTSS1LQ765P7 747 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 GATAD2AQ86YP4 633 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 EIF1ADQ8N9N8 165 aaKnown RBP8.23□□□□□ -1.09
VPS41-202ENST00000310301 IL31RAQ8NI17 732 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 RNASE11Q8TAA1 199 aaKnown RBP8.23□□□□□ -1.09
VPS41-202ENST00000310301 ZNF398Q8TD17 642 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 PTCD3Q96EY7 689 aaKnown RBP8.23□□□□□ -1.09
VPS41-202ENST00000310301 ZNF518BQ9C0D4 1074 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 CRISPLD1Q9H336 500 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 RPL26L1Q9UNX3 145 aaKnown RBP8.23□□□□□ -1.09
VPS41-202ENST00000310301 DERAQ9Y315 318 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 NRAPQ86VF7 1730 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 A0A0U1RQJ8 604 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 PDE2AO00408 941 aaPredicted RBP8.23□□□□□ -1.09
VPS41-202ENST00000310301 DDX3XO00571 662 aaKnown RBP eCLIP8.23□□□□□ -1.09
VPS41-202ENST00000310301 TRMUO75648 421 aaKnown RBP8.23□□□□□ -1.09
VPS41-202ENST00000310301 PTPN2P17706 415 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 RAP1GAPP47736 663 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 ALDH9A1P49189 494 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 RHAGQ02094 409 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 PLCL1Q15111 1095 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 PAGE2BQ5JRK9 111 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 ZCCHC8Q6NZY4 707 aaKnown RBP8.23□□□□□ -1.09
VPS41-202ENST00000310301 ARHGAP36Q6ZRI8 547 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 MCFD2Q8NI22 146 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 ETNPPLQ8TBG4 499 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 TCF12Q99081 682 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 ARMC7Q9H6L4 198 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 SPAG4Q9NPE6 437 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 KBTBD4Q9NVX7 518 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 RAPGEFL1Q9UHV5 662 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 PRELID1Q9Y255 219 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 SYN3O14994 580 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 CRTAMO95727 393 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 CXCL8P10145 99 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 ITGA3P26006 1051 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 CLK2P49760 499 aaKnown RBP8.23□□□□□ -1.09
VPS41-202ENST00000310301 PLK1P53350 603 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 ARHGAP1Q07960 439 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 PDK4Q16654 411 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 LIN52Q52LA3 116 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 RUNDC3AQ59EK9 446 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 SPESP1Q6UW49 350 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 FAM131AQ6UXB0 335 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 ZNF621Q6ZSS3 439 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 POLNQ7Z5Q5 900 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 OR56A4Q8NGH8 313 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 MAGEC3Q8TD91 643 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 REXO5Q96IC2 774 aaKnown RBP8.23□□□□□ -1.09
VPS41-202ENST00000310301 SENP8Q96LD8 212 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 MNTQ99583 582 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 NIFKQ9BYG3 293 aaKnown RBP8.23□□□□□ -1.09
VPS41-202ENST00000310301 ZNF510Q9Y2H8 683 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 MTF2Q9Y483 593 aaPredicted RBP8.23□□□□□ -1.09
VPS41-202ENST00000310301 DGKBQ9Y6T7 804 aa8.23□□□□□ -1.09
VPS41-202ENST00000310301 FAM92AA1XBS5 289 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 RGSL1A5PLK6 1076 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 TRDMT1O14717 391 aaKnown RBP8.22□□□□□ -1.09
VPS41-202ENST00000310301 AREL1O15033 823 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 CSDE1O75534 798 aaKnown RBP8.22□□□□□ -1.09
VPS41-202ENST00000310301 SNRPB2P08579 225 aaKnown RBP8.22□□□□□ -1.09
VPS41-202ENST00000310301 PBLDP30039 288 aaPredicted RBP8.22□□□□□ -1.09
VPS41-202ENST00000310301 GUCA1AP43080 201 aaPredicted RBP8.22□□□□□ -1.09
VPS41-202ENST00000310301 NUMBP49757 651 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 SEPHS1P49903 392 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 LDLRAP1Q5SW96 308 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 ERICH5Q6P6B1 374 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 TRMT11Q7Z4G4 463 aaKnown RBP8.22□□□□□ -1.09
VPS41-202ENST00000310301 MCOLN2Q8IZK6 566 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 MREGQ8N565 214 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 CCDC185Q8N715 623 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 SIPA1Q96FS4 1042 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 C1QTNF7Q9BXJ2 289 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 CIPCQ9C0C6 399 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 MTMR12Q9C0I1 747 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 SP140LQ9H930 580 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 CHST7Q9NS84 486 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 TBC1D14Q9P2M4 693 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 ARHGAP28Q9P2N2 729 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 PHF11Q9UIL8 331 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 C3orf18Q9UK00 162 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 FRMPD4Q14CM0 1322 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms