RNA–Protein interactions for RNA: ENST00000309285.3

XCR1-201, Transcript of X-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCR1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-201ENST00000309285 YBX3P16989 372 aaKnown RBP eCLIP9.34□□□□□ -0.91
XCR1-201ENST00000309285 PTPN1P18031 435 aaKnown RBP9.34□□□□□ -0.91
XCR1-201ENST00000309285 ZIK1Q3SY52 487 aaPredicted RBP9.34□□□□□ -0.91
XCR1-201ENST00000309285 PQLC1Q8N2U9 271 aa9.34□□□□□ -0.91
XCR1-201ENST00000309285 MIER2Q8N344 545 aa9.34□□□□□ -0.91
XCR1-201ENST00000309285 WDTC1Q8N5D0 677 aa9.34□□□□□ -0.91
XCR1-201ENST00000309285 TDRD5Q8NAT2 981 aaKnown RBP9.34□□□□□ -0.91
XCR1-201ENST00000309285 LPPQ93052 612 aa9.34□□□□□ -0.91
XCR1-201ENST00000309285 CADM1Q9BY67 442 aaKnown RBP9.34□□□□□ -0.91
XCR1-201ENST00000309285 DPEP3Q9H4B8 488 aa9.34□□□□□ -0.91
XCR1-201ENST00000309285 ZNF556Q9HAH1 456 aa9.34□□□□□ -0.91
XCR1-201ENST00000309285 COL4A5P29400 1685 aa9.34□□□□□ -0.91
XCR1-201ENST00000309285 SMIM35A0A1B0GVV1 85 aa9.34□□□□□ -0.91
XCR1-201ENST00000309285 MANSC4A6NHS7 340 aaPredicted RBP9.34□□□□□ -0.91
XCR1-201ENST00000309285 TRPC5OSA6NMA1 111 aa9.34□□□□□ -0.91
XCR1-201ENST00000309285 C2orf81A6NN90 581 aa9.34□□□□□ -0.91
XCR1-201ENST00000309285 AXIN1O15169 862 aa9.34□□□□□ -0.91
XCR1-201ENST00000309285 TEX28O15482 410 aa9.34□□□□□ -0.91
XCR1-201ENST00000309285 SIN3BO75182 1162 aa9.34□□□□□ -0.91
XCR1-201ENST00000309285 ANXA9O76027 345 aa9.34□□□□□ -0.91
XCR1-201ENST00000309285 NADKO95544 446 aaPredicted RBP9.34□□□□□ -0.91
XCR1-201ENST00000309285 SNAI1O95863 264 aaPredicted RBP9.34□□□□□ -0.91
XCR1-201ENST00000309285 SLC2A3P11169 496 aa9.34□□□□□ -0.91
XCR1-201ENST00000309285 DDX5P17844 614 aaKnown RBP9.34□□□□□ -0.91
XCR1-201ENST00000309285 ZNF132P52740 706 aa9.34□□□□□ -0.91
XCR1-201ENST00000309285 ZNF792Q3KQV3 632 aa9.34□□□□□ -0.91
XCR1-201ENST00000309285 SCARA3Q6AZY7 606 aa9.34□□□□□ -0.91
XCR1-201ENST00000309285 NECAB2Q7Z6G3 386 aa9.34□□□□□ -0.91
XCR1-201ENST00000309285 MYO1HQ8N1T3 1032 aa9.34□□□□□ -0.91
XCR1-201ENST00000309285 RBM15BQ8NDT2 890 aaKnown RBP9.34□□□□□ -0.91
XCR1-201ENST00000309285 CPT1BQ92523 772 aa9.34□□□□□ -0.91
XCR1-201ENST00000309285 TMEM109Q9BVC6 243 aa9.34□□□□□ -0.91
XCR1-201ENST00000309285 ULBP1Q9BZM6 244 aa9.34□□□□□ -0.91
XCR1-201ENST00000309285 RNF208Q9H0X6 261 aa9.34□□□□□ -0.91
XCR1-201ENST00000309285 PCDH18Q9HCL0 1135 aa9.34□□□□□ -0.91
XCR1-201ENST00000309285 H2AFY2Q9P0M6 372 aaPredicted RBP9.34□□□□□ -0.91
XCR1-201ENST00000309285 PLA2G4CQ9UP65 541 aa9.34□□□□□ -0.91
XCR1-201ENST00000309285 SDK1Q7Z5N4 2213 aa9.34□□□□□ -0.91
XCR1-201ENST00000309285 LOC100506127A0A0U1RQW1 187 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 A0A1W2PQ72 361 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 CCDC182A6NF36 153 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 C2CD4BA6NLJ0 364 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 EVPLLA8MZ36 301 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 F8W810 466 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 PDLIM1O00151 329 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 MTSS1O43312 755 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 GABBR2O75899 941 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 ABHD2P08910 425 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 ALADP13716 330 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 NR4A1P22736 598 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 SCNN1GP51170 649 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 MCCD1P59942 119 aaPredicted RBP9.33□□□□□ -0.92
XCR1-201ENST00000309285 FAAP100Q0VG06 881 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 SIX1Q15475 284 aaPredicted RBP9.33□□□□□ -0.92
XCR1-201ENST00000309285 FAM83EQ2M2I3 478 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 TAPT1Q6NXT6 567 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 C4orf22Q6V702 233 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 COLGALT1Q8NBJ5 622 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 HTR3CQ8WXA8 447 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 HSFY1Q96LI6 401 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 MNTQ99583 582 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 C12orf4Q9NQ89 552 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 ZNF221Q9UK13 617 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 DNAJC25-GNG10A0A024R161 153 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 A0A1W2PPM1 405 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 PCDH8O95206 1070 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 CPA3P15088 417 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 LMO2P25791 158 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 LHX1P48742 406 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 RHOAP61586 193 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 FKBP1BP68106 108 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 XIAPP98170 497 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 BTG3Q14201 252 aaPredicted RBP9.33□□□□□ -0.92
XCR1-201ENST00000309285 RNASEH2BQ5TBB1 312 aaKnown RBP9.33□□□□□ -0.92
XCR1-201ENST00000309285 KLHDC10Q6PID8 442 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 GET4Q7L5D6 327 aaPredicted RBP9.33□□□□□ -0.92
XCR1-201ENST00000309285 ZNF398Q8TD17 642 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 ELMO1Q92556 727 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 BCO2Q9BYV7 579 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 NMUR2Q9GZQ4 415 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 NT5MQ9NPB1 228 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 IMPAD1Q9NX62 359 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 ING3Q9NXR8 418 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 C5orf60A6NFR6 353 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 PRR5-ARHGAP8B1AHC4 643 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 NR5A2O00482 541 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 PAPSS1O43252 624 aaPredicted RBP9.33□□□□□ -0.92
XCR1-201ENST00000309285 CCNT2O60583 730 aaKnown RBP9.33□□□□□ -0.92
XCR1-201ENST00000309285 USP17L7P0C7H9 530 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 GOT1P17174 413 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 NPR3P17342 541 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 TKTP29401 623 aaKnown RBP9.33□□□□□ -0.92
XCR1-201ENST00000309285 GPC1P35052 558 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 NEK3P51956 506 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 OXCT1P55809 520 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 ARHGAP8P85298 464 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 GBE1Q04446 702 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 TUBA3CQ13748 450 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 TTLL9Q3SXZ7 439 aa9.33□□□□□ -0.92
XCR1-201ENST00000309285 MRNIPQ6NTE8 343 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms