RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 PDLIM1O00151 329 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 PRPF4O43172 522 aaKnown RBP eCLIP4.99□□□□□ -1.61
CAST-201ENST00000309190 SYNCRIPO60506 623 aaKnown RBP4.99□□□□□ -1.61
CAST-201ENST00000309190 RPLP2P05387 115 aaKnown RBP4.99□□□□□ -1.61
CAST-201ENST00000309190 NQO1P15559 274 aaKnown RBP4.99□□□□□ -1.61
CAST-201ENST00000309190 POLR2EP19388 210 aaKnown RBP4.99□□□□□ -1.61
CAST-201ENST00000309190 TAC1P20366 129 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 AKT1P31749 480 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 CSRP3P50461 194 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 MLLT6P55198 1093 aaPredicted RBP4.99□□□□□ -1.61
CAST-201ENST00000309190 PDE1BQ01064 536 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 SLC25A11Q02978 314 aaKnown RBP4.99□□□□□ -1.61
CAST-201ENST00000309190 LMAN2Q12907 356 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 SLC12A1Q13621 1099 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 FAM151BQ6UXP7 276 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 PRR23BQ6ZRT6 265 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 TPRG1Q6ZUI0 275 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 C3orf62Q6ZUJ4 267 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 TRPM8Q7Z2W7 1104 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 HTR3CQ8WXA8 447 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 MRPL38Q96DV4 380 aaKnown RBP4.99□□□□□ -1.61
CAST-201ENST00000309190 VPS11Q9H270 941 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 FAM114A2Q9NRY5 505 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 FBXO9Q9UK97 447 aaPredicted RBP4.99□□□□□ -1.61
CAST-201ENST00000309190 PSMD13Q9UNM6 376 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 MTCH2Q9Y6C9 303 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 OR2AG2A6NM03 316 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 PRRT4C9JH25 899 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 FFAR2O15552 330 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 SDC3O75056 442 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 UNC5CO95185 931 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 TRIM16O95361 564 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 FESP07332 822 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 MYF5P13349 255 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 IL4RP24394 825 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 PTPN7P35236 360 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 DGKGP49619 791 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 PRAMEP78395 509 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 PTK6Q13882 451 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 DHCR24Q15392 516 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 SNCBQ16143 134 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 ASTLQ6HA08 431 aaPredicted RBP4.99□□□□□ -1.61
CAST-201ENST00000309190 TRMT10BQ6PF06 316 aaKnown RBP4.99□□□□□ -1.61
CAST-201ENST00000309190 DPY19L3Q6ZPD9 716 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 ZNF761Q86XN6 746 aaPredicted RBP4.99□□□□□ -1.61
CAST-201ENST00000309190 ZNF567Q8N184 647 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 ZNF513Q8N8E2 541 aaPredicted RBP4.99□□□□□ -1.61
CAST-201ENST00000309190 EPS8L3Q8TE67 593 aaKnown RBP4.99□□□□□ -1.61
CAST-201ENST00000309190 FAM81BQ96LP2 452 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 KLHL32Q96NJ5 620 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 FERMT1Q9BQL6 677 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 ACAT2Q9BWD1 397 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 ROPN1BQ9BZX4 212 aaPredicted RBP4.99□□□□□ -1.61
CAST-201ENST00000309190 PHACTR1Q9C0D0 580 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 KLHL25Q9H0H3 589 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 UBE2ZQ9H832 354 aaPredicted RBP4.99□□□□□ -1.61
CAST-201ENST00000309190 ROPN1Q9HAT0 212 aaPredicted RBP4.99□□□□□ -1.61
CAST-201ENST00000309190 RXFP1Q9HBX9 757 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 KLHL3Q9UH77 587 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 SLC25A13Q9UJS0 675 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 ARL5AQ9Y689 179 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 NUP214P35658 2090 aaPredicted RBP4.99□□□□□ -1.61
CAST-201ENST00000309190 MED12Q93074 2177 aa4.98□□□□□ -1.61
CAST-201ENST00000309190 MUSKO15146 869 aa4.98□□□□□ -1.61
CAST-201ENST00000309190 LZTS3O60299 673 aaPredicted RBP4.98□□□□□ -1.61
CAST-201ENST00000309190 FBXO21O94952 628 aa4.98□□□□□ -1.61
CAST-201ENST00000309190 GSRP00390 522 aa4.98□□□□□ -1.61
CAST-201ENST00000309190 F11P03951 625 aa4.98□□□□□ -1.61
CAST-201ENST00000309190 ABHD2P08910 425 aa4.98□□□□□ -1.61
CAST-201ENST00000309190 MYZAPP0CAP1 466 aa4.98□□□□□ -1.61
CAST-201ENST00000309190 TPBGLP0DKB5 382 aa4.98□□□□□ -1.61
CAST-201ENST00000309190 MYBL1P10243 752 aa4.98□□□□□ -1.61
CAST-201ENST00000309190 KITP10721 976 aa4.98□□□□□ -1.61
CAST-201ENST00000309190 RPL10P27635 214 aaKnown RBP4.98□□□□□ -1.61
CAST-201ENST00000309190 RFC2P35250 354 aa4.98□□□□□ -1.61
CAST-201ENST00000309190 ELK3P41970 407 aa4.98□□□□□ -1.61
CAST-201ENST00000309190 CDKN1CP49918 316 aaPredicted RBP4.98□□□□□ -1.61
CAST-201ENST00000309190 GNA12Q03113 381 aa4.98□□□□□ -1.61
CAST-201ENST00000309190 C1orf61Q13536 156 aa4.98□□□□□ -1.61
CAST-201ENST00000309190 ANKRD20A2Q5SQ80 823 aa4.98□□□□□ -1.61
CAST-201ENST00000309190 ANKRD20A1Q5TYW2 823 aa4.98□□□□□ -1.61
CAST-201ENST00000309190 ANKRD20A3Q5VUR7 823 aa4.98□□□□□ -1.61
CAST-201ENST00000309190 TSPAN33Q86UF1 283 aa4.98□□□□□ -1.61
CAST-201ENST00000309190 AGGF1Q8N302 714 aaeCLIP4.98□□□□□ -1.61
CAST-201ENST00000309190 OR13C4Q8NGS5 318 aa4.98□□□□□ -1.61
CAST-201ENST00000309190 SUSD6Q92537 303 aa4.98□□□□□ -1.61
CAST-201ENST00000309190 GATA6Q92908 595 aa4.98□□□□□ -1.61
CAST-201ENST00000309190 RELTQ969Z4 430 aa4.98□□□□□ -1.61
CAST-201ENST00000309190 BTN2A3PQ96KV6 586 aa4.98□□□□□ -1.61
CAST-201ENST00000309190 ARPC5LQ9BPX5 153 aa4.98□□□□□ -1.61
CAST-201ENST00000309190 TMEM175Q9BSA9 504 aa4.98□□□□□ -1.61
CAST-201ENST00000309190 DCLK3Q9C098 648 aa4.98□□□□□ -1.61
CAST-201ENST00000309190 IL21Q9HBE4 155 aa4.98□□□□□ -1.61
CAST-201ENST00000309190 SSU72Q9NP77 194 aaKnown RBP4.98□□□□□ -1.61
CAST-201ENST00000309190 WHRNQ9P202 907 aa4.98□□□□□ -1.61
CAST-201ENST00000309190 MARCOQ9UEW3 520 aaPredicted RBP4.98□□□□□ -1.61
CAST-201ENST00000309190 FETUBQ9UGM5 382 aa4.98□□□□□ -1.61
CAST-201ENST00000309190 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.98□□□□□ -1.61
CAST-201ENST00000309190 DMXL2Q8TDJ6 3036 aa4.98□□□□□ -1.61
CAST-201ENST00000309190 SHROOM3Q8TF72 1996 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms