RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 RRAGCQ9HB90 399 aa12.7□□□□□ -0.38
USP38-201ENST00000307017 ARHGAP28Q9P2N2 729 aa12.7□□□□□ -0.38
USP38-201ENST00000307017 A0A087X1B8 175 aa12.7□□□□□ -0.38
USP38-201ENST00000307017 MAMLD1Q13495 774 aa12.7□□□□□ -0.38
USP38-201ENST00000307017 FAM43BQ6ZT52 329 aaPredicted RBP12.7□□□□□ -0.38
USP38-201ENST00000307017 TBC1D21Q8IYX1 336 aa12.7□□□□□ -0.38
USP38-201ENST00000307017 PIK3C3Q8NEB9 887 aa12.7□□□□□ -0.38
USP38-201ENST00000307017 SYTL5Q8TDW5 730 aaPredicted RBP12.7□□□□□ -0.38
USP38-201ENST00000307017 OR52E6Q96RD3 313 aa12.7□□□□□ -0.38
USP38-201ENST00000307017 CNTFP26441 200 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 SLC20A2Q08357 652 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 ZCCHC9Q8N567 271 aaKnown RBP12.69□□□□□ -0.38
USP38-201ENST00000307017 OR8H1Q8NGG4 311 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 ASB12Q8WXK4 309 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 TNFRSF25Q93038 417 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 LINGO1Q96FE5 620 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 HPSEQ9Y251 543 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 GSTK1Q9Y2Q3 226 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 H7C4K7 107 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 CD3EAPO15446 510 aaKnown RBP12.69□□□□□ -0.38
USP38-201ENST00000307017 ACVR2BQ13705 512 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 MAPKAPK3Q16644 382 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 ADHFE1Q8IWW8 467 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 PJA1Q8NG27 643 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 NAT14Q8WUY8 206 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 CKAP2Q8WWK9 683 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 PANX1Q96RD7 426 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 OR10H1Q9Y4A9 318 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 MAP2P11137 1827 aaKnown RBP12.69□□□□□ -0.38
USP38-201ENST00000307017 MED14O60244 1454 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 ZNF879B4DU55 563 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 RBAK-RBAKDNI3L0D1 243 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 DRD4P21917 467 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 CAMK1Q14012 370 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 PLEKHG6Q3KR16 790 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 INO80DQ53TQ3 878 aaPredicted RBP12.69□□□□□ -0.38
USP38-201ENST00000307017 SAMD4BQ5PRF9 694 aaKnown RBP12.69□□□□□ -0.38
USP38-201ENST00000307017 CDKAL1Q5VV42 579 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 IRGCQ6NXR0 463 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 KIAA1324Q6UXG2 1013 aaKnown RBP12.69□□□□□ -0.38
USP38-201ENST00000307017 GLT1D1Q96MS3 346 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 GAD1Q99259 594 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 CORO1BQ9BR76 489 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 OR12D3Q9UGF7 316 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 C19orf81C9J6K1 198 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 RPL22P35268 128 aaKnown RBP12.69□□□□□ -0.38
USP38-201ENST00000307017 RPS6KA3P51812 740 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 KLHL23Q8NBE8 558 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 OR2L5Q8NG80 312 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 LRTOMTQ8WZ04 291 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 DHRS7Q9Y394 339 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 BICRAQ9NZM4 1560 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 TCRBV7S2A1N4TA0A589 114 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 GTPBP1O00178 669 aaKnown RBP12.69□□□□□ -0.38
USP38-201ENST00000307017 SERPINA1P01009 418 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 CTSEP14091 401 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 MZT2AQ6P582 158 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 C4orf22Q6V702 233 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 FBXO33Q7Z6M2 555 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 FOXRED2Q8IWF2 684 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 SLC9A6Q92581 669 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 LPIN3Q9BQK8 851 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 EMILIN2Q9BXX0 1053 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 DSN1Q9H410 356 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 GOLGA2P5Q9HBQ8 144 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 NEK6Q9HC98 313 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 SPAG4Q9NPE6 437 aa12.69□□□□□ -0.38
USP38-201ENST00000307017 DCLK1O15075 740 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 SNX3O60493 162 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 TOP3BO95985 862 aaKnown RBP12.68□□□□□ -0.38
USP38-201ENST00000307017 ZNF7P17097 686 aaPredicted RBP12.68□□□□□ -0.38
USP38-201ENST00000307017 TTKP33981 857 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 RFX5P48382 616 aaPredicted RBP12.68□□□□□ -0.38
USP38-201ENST00000307017 ZNF549Q6P9A3 640 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 FBXL19Q6PCT2 694 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 OR10Q1Q8NGQ4 319 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 MCOLN3Q8TDD5 553 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 FAM151AQ8WW52 585 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 TTTY10Q9BZA0 68 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 TRIT1Q9H3H1 467 aaKnown RBP12.68□□□□□ -0.38
USP38-201ENST00000307017 UBA2Q9UBT2 640 aaPredicted RBP12.68□□□□□ -0.38
USP38-201ENST00000307017 SLCO1B7G3V0H7 640 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 PRODHO43272 600 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 SCNN1GP51170 649 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 SLC7A2P52569 658 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 ACSM2AQ08AH3 577 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 VPS26BQ4G0F5 336 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 RALGPS1Q5JS13 557 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 ACSM2BQ68CK6 577 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 ZNF34Q8IZ26 560 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 LRRC17Q8N6Y2 441 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 PPP1R2P1Q96PQ5 205 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 FAM126AQ9BYI3 521 aaPredicted RBP12.68□□□□□ -0.38
USP38-201ENST00000307017 CERS4Q9HA82 394 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 CRB1P82279 1406 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 OR7A10O76100 309 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 KDM4BO94953 1096 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 TRUB2O95900 331 aaKnown RBP12.68□□□□□ -0.38
USP38-201ENST00000307017 IL1BP01584 269 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 S100A6P06703 90 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms