RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 BTRCQ9Y297 605 aa13.11□□□□□ -0.31
TRIM35-201ENST00000305364 TBC1D30Q9Y2I9 924 aa13.11□□□□□ -0.31
TRIM35-201ENST00000305364 AAR2Q9Y312 384 aaKnown RBP13.11□□□□□ -0.31
TRIM35-201ENST00000305364 SDHDO14521 159 aa13.11□□□□□ -0.31
TRIM35-201ENST00000305364 EDN1P05305 212 aa13.11□□□□□ -0.31
TRIM35-201ENST00000305364 GSTT2P0CG29 244 aa13.11□□□□□ -0.31
TRIM35-201ENST00000305364 GSTT2BP0CG30 244 aa13.11□□□□□ -0.31
TRIM35-201ENST00000305364 HGFP14210 728 aa13.11□□□□□ -0.31
TRIM35-201ENST00000305364 ALDH4A1P30038 563 aa13.11□□□□□ -0.31
TRIM35-201ENST00000305364 TNK2Q07912 1038 aa13.11□□□□□ -0.31
TRIM35-201ENST00000305364 SNX17Q15036 470 aa13.11□□□□□ -0.31
TRIM35-201ENST00000305364 RBBP7Q16576 425 aa13.11□□□□□ -0.31
TRIM35-201ENST00000305364 DGUOKQ16854 277 aa13.11□□□□□ -0.31
TRIM35-201ENST00000305364 HSDL1Q3SXM5 330 aa13.11□□□□□ -0.31
TRIM35-201ENST00000305364 RSBN1Q5VWQ0 802 aaPredicted RBP13.11□□□□□ -0.31
TRIM35-201ENST00000305364 NEPROQ6NW34 567 aa13.11□□□□□ -0.31
TRIM35-201ENST00000305364 SAPCD2Q86UD0 394 aa13.11□□□□□ -0.31
TRIM35-201ENST00000305364 APPL2Q8NEU8 664 aa13.11□□□□□ -0.31
TRIM35-201ENST00000305364 CALML6Q8TD86 181 aa13.11□□□□□ -0.31
TRIM35-201ENST00000305364 HEXDCQ8WVB3 486 aa13.11□□□□□ -0.31
TRIM35-201ENST00000305364 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.11□□□□□ -0.31
TRIM35-201ENST00000305364 FBRSL1Q9HCM7 1045 aaKnown RBP13.11□□□□□ -0.31
TRIM35-201ENST00000305364 EIF2B3Q9NR50 452 aaKnown RBP13.11□□□□□ -0.31
TRIM35-201ENST00000305364 TMPRSS4Q9NRS4 437 aa13.11□□□□□ -0.31
TRIM35-201ENST00000305364 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.11□□□□□ -0.31
TRIM35-201ENST00000305364 MAFBQ9Y5Q3 323 aaPredicted RBP13.11□□□□□ -0.31
TRIM35-201ENST00000305364 RAD54BQ9Y620 910 aa13.11□□□□□ -0.31
TRIM35-201ENST00000305364 ERI2A8K979 691 aaKnown RBP13.1□□□□□ -0.31
TRIM35-201ENST00000305364 GPR25O00155 361 aa13.1□□□□□ -0.31
TRIM35-201ENST00000305364 CLPXO76031 633 aa13.1□□□□□ -0.31
TRIM35-201ENST00000305364 MFN2O95140 757 aa13.1□□□□□ -0.31
TRIM35-201ENST00000305364 MOCS2O96007 188 aaPredicted RBP13.1□□□□□ -0.31
TRIM35-201ENST00000305364 CPB1P15086 417 aa13.1□□□□□ -0.31
TRIM35-201ENST00000305364 DPP6P42658 865 aa13.1□□□□□ -0.31
TRIM35-201ENST00000305364 TAS2R39P59534 338 aa13.1□□□□□ -0.31
TRIM35-201ENST00000305364 SLC26A9Q7LBE3 791 aa13.1□□□□□ -0.31
TRIM35-201ENST00000305364 CEP19Q96LK0 163 aa13.1□□□□□ -0.31
TRIM35-201ENST00000305364 C17orf80Q9BSJ5 609 aa13.1□□□□□ -0.31
TRIM35-201ENST00000305364 THUMPD3Q9BV44 507 aaKnown RBP13.1□□□□□ -0.31
TRIM35-201ENST00000305364 TRIM8Q9BZR9 551 aa13.1□□□□□ -0.31
TRIM35-201ENST00000305364 PARVBQ9HBI1 364 aa13.1□□□□□ -0.31
TRIM35-201ENST00000305364 PCDH12Q9NPG4 1184 aa13.1□□□□□ -0.31
TRIM35-201ENST00000305364 HPS4Q9NQG7 708 aa13.1□□□□□ -0.31
TRIM35-201ENST00000305364 SCHIP1Q9P0W5 487 aaPredicted RBP13.1□□□□□ -0.31
TRIM35-201ENST00000305364 SIX4Q9UIU6 781 aa13.1□□□□□ -0.31
TRIM35-201ENST00000305364 PSME2Q9UL46 239 aa13.1□□□□□ -0.31
TRIM35-201ENST00000305364 PCDHGA7Q9Y5G6 932 aa13.1□□□□□ -0.31
TRIM35-201ENST00000305364 ZNF195O14628 629 aa13.1□□□□□ -0.31
TRIM35-201ENST00000305364 ANXA9O76027 345 aa13.1□□□□□ -0.31
TRIM35-201ENST00000305364 IPO13O94829 963 aaKnown RBP13.1□□□□□ -0.31
TRIM35-201ENST00000305364 MTA1Q13330 715 aa13.1□□□□□ -0.31
TRIM35-201ENST00000305364 DNASE1L3Q13609 305 aa13.1□□□□□ -0.31
TRIM35-201ENST00000305364 HOPXQ9BPY8 73 aaPredicted RBP13.1□□□□□ -0.31
TRIM35-201ENST00000305364 CORO1BQ9BR76 489 aa13.1□□□□□ -0.31
TRIM35-201ENST00000305364 WDR12Q9GZL7 423 aaKnown RBP13.1□□□□□ -0.31
TRIM35-201ENST00000305364 AP5M1Q9H0R1 490 aa13.1□□□□□ -0.31
TRIM35-201ENST00000305364 SPON1Q9HCB6 807 aa13.1□□□□□ -0.31
TRIM35-201ENST00000305364 CD320Q9NPF0 282 aa13.1□□□□□ -0.31
TRIM35-201ENST00000305364 VPS28Q9UK41 221 aa13.1□□□□□ -0.31
TRIM35-201ENST00000305364 FBXO5Q9UKT4 447 aa13.1□□□□□ -0.31
TRIM35-201ENST00000305364 TRHDEQ9UKU6 1024 aa13.1□□□□□ -0.31
TRIM35-201ENST00000305364 NHSQ6T4R5 1651 aa13.1□□□□□ -0.31
TRIM35-201ENST00000305364 HS6ST1O60243 411 aa13.1□□□□□ -0.31
TRIM35-201ENST00000305364 BACE1P56817 501 aa13.1□□□□□ -0.31
TRIM35-201ENST00000305364 FAM98BQ52LJ0 330 aaKnown RBP13.1□□□□□ -0.31
TRIM35-201ENST00000305364 THOC7Q6I9Y2 204 aaKnown RBP13.1□□□□□ -0.31
TRIM35-201ENST00000305364 FAM35AQ86V20 835 aa13.1□□□□□ -0.31
TRIM35-201ENST00000305364 ARNTL2Q8WYA1 636 aa13.1□□□□□ -0.31
TRIM35-201ENST00000305364 FIG4Q92562 907 aa13.1□□□□□ -0.31
TRIM35-201ENST00000305364 SMARCAD1Q9H4L7 1026 aa13.1□□□□□ -0.31
TRIM35-201ENST00000305364 PDLIM7Q9NR12 457 aa13.1□□□□□ -0.31
TRIM35-201ENST00000305364 NCF1BA6NI72 391 aaPredicted RBP13.09□□□□□ -0.31
TRIM35-201ENST00000305364 NCF1CA8MVU1 366 aaPredicted RBP13.09□□□□□ -0.31
TRIM35-201ENST00000305364 NCAM2O15394 837 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 SEC24AO95486 1093 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 MYCP01106 439 aaPredicted RBP13.09□□□□□ -0.31
TRIM35-201ENST00000305364 LTA4HP09960 611 aaKnown RBP13.09□□□□□ -0.31
TRIM35-201ENST00000305364 NCF1P14598 390 aaPredicted RBP13.09□□□□□ -0.31
TRIM35-201ENST00000305364 ARHGDIAP52565 204 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 DAB2P98082 770 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 SP2Q02086 613 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 NFATC3Q12968 1075 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 PCID2Q5JVF3 399 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 IFNLR1Q8IU57 520 aaPredicted RBP13.09□□□□□ -0.31
TRIM35-201ENST00000305364 TBC1D21Q8IYX1 336 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 ITFG1Q8TB96 612 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 FAM162AQ96A26 154 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 OLFM1Q99784 485 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 WDCPQ9H6R7 721 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 TNFSF13BQ9Y275 285 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 A0A087X1B8 175 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 TMX2-CTNND1H3BSU7 103 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 ENDOD1O94919 500 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 ALOX5P09917 674 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 PIM1P11309 404 aaPredicted RBP13.09□□□□□ -0.31
TRIM35-201ENST00000305364 COL6A2P12110 1019 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 DPEP1P16444 411 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 PTPN3P26045 913 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 S100A5P33763 92 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 MAGEA6P43360 314 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms