RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 NETO2Q8NC67 525 aa16.8■□□□□ 0.28
TRAPPC1-201ENST00000303731 TSEN2Q8NCE0 465 aaKnown RBP16.8■□□□□ 0.28
TRAPPC1-201ENST00000303731 SNIP1Q8TAD8 396 aaKnown RBP16.8■□□□□ 0.28
TRAPPC1-201ENST00000303731 WDR48Q8TAF3 677 aa16.8■□□□□ 0.28
TRAPPC1-201ENST00000303731 IFI44Q8TCB0 444 aa16.8■□□□□ 0.28
TRAPPC1-201ENST00000303731 MAPK15Q8TD08 544 aa16.8■□□□□ 0.28
TRAPPC1-201ENST00000303731 SCG3Q8WXD2 468 aaKnown RBP16.8■□□□□ 0.28
TRAPPC1-201ENST00000303731 NAT6Q93015 286 aa16.8■□□□□ 0.28
TRAPPC1-201ENST00000303731 PSKH2Q96QS6 385 aa16.8■□□□□ 0.28
TRAPPC1-201ENST00000303731 CWC15Q9P013 229 aaKnown RBP16.8■□□□□ 0.28
TRAPPC1-201ENST00000303731 MYO1AQ9UBC5 1043 aa16.8■□□□□ 0.28
TRAPPC1-201ENST00000303731 SEPT3Q9UH03 358 aa16.8■□□□□ 0.28
TRAPPC1-201ENST00000303731 U3KQA8 63 aa16.8■□□□□ 0.28
TRAPPC1-201ENST00000303731 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.79■□□□□ 0.28
TRAPPC1-201ENST00000303731 EME2A4GXA9 379 aaPredicted RBP16.79■□□□□ 0.28
TRAPPC1-201ENST00000303731 SERPING1P05155 500 aa16.79■□□□□ 0.28
TRAPPC1-201ENST00000303731 ANXA6P08133 673 aa16.79■□□□□ 0.28
TRAPPC1-201ENST00000303731 ALPIP09923 528 aa16.79■□□□□ 0.28
TRAPPC1-201ENST00000303731 SERPINB6P35237 376 aa16.79■□□□□ 0.28
TRAPPC1-201ENST00000303731 EIF2S3P41091 472 aaKnown RBP16.79■□□□□ 0.28
TRAPPC1-201ENST00000303731 MTM1Q13496 603 aa16.79■□□□□ 0.28
TRAPPC1-201ENST00000303731 ELOCQ15369 112 aa16.79■□□□□ 0.28
TRAPPC1-201ENST00000303731 C6orf132Q5T0Z8 1188 aa16.79■□□□□ 0.28
TRAPPC1-201ENST00000303731 FAXCQ5TGI0 409 aa16.79■□□□□ 0.28
TRAPPC1-201ENST00000303731 LVRNQ6Q4G3 990 aa16.79■□□□□ 0.28
TRAPPC1-201ENST00000303731 KDM7AQ6ZMT4 941 aa16.79■□□□□ 0.28
TRAPPC1-201ENST00000303731 CAMK1DQ8IU85 385 aa16.79■□□□□ 0.28
TRAPPC1-201ENST00000303731 BBS5Q8N3I7 341 aa16.79■□□□□ 0.28
TRAPPC1-201ENST00000303731 NPWQ8N729 165 aa16.79■□□□□ 0.28
TRAPPC1-201ENST00000303731 PAF1Q8N7H5 531 aa16.79■□□□□ 0.28
TRAPPC1-201ENST00000303731 TEKT4Q8WW24 435 aa16.79■□□□□ 0.28
TRAPPC1-201ENST00000303731 SPOCK2Q92563 424 aa16.79■□□□□ 0.28
TRAPPC1-201ENST00000303731 FGF11Q92914 225 aa16.79■□□□□ 0.28
TRAPPC1-201ENST00000303731 ECHDC3Q96DC8 303 aa16.79■□□□□ 0.28
TRAPPC1-201ENST00000303731 LRRC61Q9BV99 259 aa16.79■□□□□ 0.28
TRAPPC1-201ENST00000303731 BOCQ9BWV1 1114 aa16.79■□□□□ 0.28
TRAPPC1-201ENST00000303731 TRIM7Q9C029 511 aa16.79■□□□□ 0.28
TRAPPC1-201ENST00000303731 MBNL1Q9NR56 388 aaKnown RBP16.79■□□□□ 0.28
TRAPPC1-201ENST00000303731 IGSF10Q6WRI0 2623 aa16.79■□□□□ 0.28
TRAPPC1-201ENST00000303731 ASXL3Q9C0F0 2248 aa16.78■□□□□ 0.28
TRAPPC1-201ENST00000303731 BUB1BO60566 1050 aaPredicted RBP16.78■□□□□ 0.28
TRAPPC1-201ENST00000303731 TCEA3O75764 348 aa16.78■□□□□ 0.28
TRAPPC1-201ENST00000303731 SKILP12757 684 aa16.78■□□□□ 0.28
TRAPPC1-201ENST00000303731 ITIH2P19823 946 aa16.78■□□□□ 0.28
TRAPPC1-201ENST00000303731 PTMSP20962 102 aa16.78■□□□□ 0.28
TRAPPC1-201ENST00000303731 LIG3P49916 1009 aa16.78■□□□□ 0.28
TRAPPC1-201ENST00000303731 HK3P52790 923 aa16.78■□□□□ 0.28
TRAPPC1-201ENST00000303731 UBASH3AP57075 661 aa16.78■□□□□ 0.28
TRAPPC1-201ENST00000303731 ZBED6P86452 979 aa16.78■□□□□ 0.28
TRAPPC1-201ENST00000303731 FANCCQ00597 558 aa16.78■□□□□ 0.28
TRAPPC1-201ENST00000303731 LBRQ14739 615 aaKnown RBP16.78■□□□□ 0.28
TRAPPC1-201ENST00000303731 NFATC4Q14934 902 aa16.78■□□□□ 0.28
TRAPPC1-201ENST00000303731 WSCD2Q2TBF2 565 aa16.78■□□□□ 0.28
TRAPPC1-201ENST00000303731 DEFB133Q30KQ1 61 aa16.78■□□□□ 0.28
TRAPPC1-201ENST00000303731 HGSNATQ68CP4 663 aa16.78■□□□□ 0.28
TRAPPC1-201ENST00000303731 ESRP1Q6NXG1 681 aaKnown RBP16.78■□□□□ 0.28
TRAPPC1-201ENST00000303731 TMCO3Q6UWJ1 677 aa16.78■□□□□ 0.28
TRAPPC1-201ENST00000303731 RBFAQ8N0V3 343 aa16.78■□□□□ 0.28
TRAPPC1-201ENST00000303731 NIPA2Q8N8Q9 360 aa16.78■□□□□ 0.28
TRAPPC1-201ENST00000303731 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.78■□□□□ 0.28
TRAPPC1-201ENST00000303731 CBX8Q9HC52 389 aa16.78■□□□□ 0.28
TRAPPC1-201ENST00000303731 KCTD5Q9NXV2 234 aa16.78■□□□□ 0.28
TRAPPC1-201ENST00000303731 IP6K2Q9UHH9 426 aa16.78■□□□□ 0.28
TRAPPC1-201ENST00000303731 GOLGA6L19H0YKK7 550 aa16.77■□□□□ 0.28
TRAPPC1-201ENST00000303731 BRINP1O60477 761 aa16.77■□□□□ 0.28
TRAPPC1-201ENST00000303731 RASGRP1O95267 797 aa16.77■□□□□ 0.28
TRAPPC1-201ENST00000303731 ELFN1P0C7U0 828 aa16.77■□□□□ 0.28
TRAPPC1-201ENST00000303731 PBX1P40424 430 aa16.77■□□□□ 0.28
TRAPPC1-201ENST00000303731 RGRP47804 291 aa16.77■□□□□ 0.28
TRAPPC1-201ENST00000303731 ADKP55263 362 aaKnown RBP16.77■□□□□ 0.28
TRAPPC1-201ENST00000303731 ZNF235Q14590 738 aa16.77■□□□□ 0.28
TRAPPC1-201ENST00000303731 CDKN3Q16667 212 aa16.77■□□□□ 0.28
TRAPPC1-201ENST00000303731 TBC1D25Q3MII6 688 aa16.77■□□□□ 0.28
TRAPPC1-201ENST00000303731 RALGPS1Q5JS13 557 aa16.77■□□□□ 0.28
TRAPPC1-201ENST00000303731 EFL1Q7Z2Z2 1120 aaKnown RBP16.77■□□□□ 0.28
TRAPPC1-201ENST00000303731 POLNQ7Z5Q5 900 aa16.77■□□□□ 0.28
TRAPPC1-201ENST00000303731 LRRC49Q8IUZ0 686 aa16.77■□□□□ 0.28
TRAPPC1-201ENST00000303731 NSMCE1Q8WV22 266 aa16.77■□□□□ 0.28
TRAPPC1-201ENST00000303731 ZNF578Q96N58 590 aaPredicted RBP16.77■□□□□ 0.28
TRAPPC1-201ENST00000303731 DCBLD2Q96PD2 775 aa16.77■□□□□ 0.28
TRAPPC1-201ENST00000303731 APOOQ9BUR5 198 aa16.77■□□□□ 0.28
TRAPPC1-201ENST00000303731 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.77■□□□□ 0.28
TRAPPC1-201ENST00000303731 RCOR3Q9P2K3 495 aaPredicted RBP16.77■□□□□ 0.28
TRAPPC1-201ENST00000303731 CAPN11Q9UMQ6 739 aa16.77■□□□□ 0.28
TRAPPC1-201ENST00000303731 DOLKQ9UPQ8 538 aa16.77■□□□□ 0.28
TRAPPC1-201ENST00000303731 COQ6Q9Y2Z9 468 aa16.77■□□□□ 0.28
TRAPPC1-201ENST00000303731 SYCE3A1L190 88 aa16.76■□□□□ 0.27
TRAPPC1-201ENST00000303731 CPED1A4D0V7 1026 aa16.76■□□□□ 0.27
TRAPPC1-201ENST00000303731 TRAFD1O14545 582 aaPredicted RBP16.76■□□□□ 0.27
TRAPPC1-201ENST00000303731 SOCS5O75159 536 aa16.76■□□□□ 0.27
TRAPPC1-201ENST00000303731 CSO75390 466 aaKnown RBP16.76■□□□□ 0.27
TRAPPC1-201ENST00000303731 GCATO75600 419 aa16.76■□□□□ 0.27
TRAPPC1-201ENST00000303731 DXOO77932 396 aaKnown RBP16.76■□□□□ 0.27
TRAPPC1-201ENST00000303731 TPM3P06753 285 aa16.76■□□□□ 0.27
TRAPPC1-201ENST00000303731 CTSEP14091 401 aa16.76■□□□□ 0.27
TRAPPC1-201ENST00000303731 TSHRP16473 764 aa16.76■□□□□ 0.27
TRAPPC1-201ENST00000303731 KELP23276 732 aa16.76■□□□□ 0.27
TRAPPC1-201ENST00000303731 SCNN1BP51168 640 aa16.76■□□□□ 0.27
TRAPPC1-201ENST00000303731 INPP5AQ14642 412 aa16.76■□□□□ 0.27
TRAPPC1-201ENST00000303731 GUSBP11Q6P575 273 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms