RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 PCDH12Q9NPG4 1184 aa24.64■■□□□ 1.53
HOXC9-201ENST00000303450 GOLGA6AQ9NYA3 693 aa24.64■■□□□ 1.53
HOXC9-201ENST00000303450 FADS3Q9Y5Q0 445 aa24.64■■□□□ 1.53
HOXC9-201ENST00000303450 AP1G1O43747 822 aa24.63■■□□□ 1.53
HOXC9-201ENST00000303450 PCDH8O95206 1070 aa24.63■■□□□ 1.53
HOXC9-201ENST00000303450 GAS8O95995 478 aa24.63■■□□□ 1.53
HOXC9-201ENST00000303450 PRLP01236 227 aa24.63■■□□□ 1.53
HOXC9-201ENST00000303450 PRKCGP05129 697 aa24.63■■□□□ 1.53
HOXC9-201ENST00000303450 RPL22P35268 128 aaKnown RBP24.63■■□□□ 1.53
HOXC9-201ENST00000303450 RPL26P61254 145 aaKnown RBP24.63■■□□□ 1.53
HOXC9-201ENST00000303450 CKAP4Q07065 602 aaKnown RBP24.63■■□□□ 1.53
HOXC9-201ENST00000303450 TUBB2AQ13885 445 aa24.63■■□□□ 1.53
HOXC9-201ENST00000303450 FAXCQ5TGI0 409 aa24.63■■□□□ 1.53
HOXC9-201ENST00000303450 CCDC70Q6NSX1 233 aa24.63■■□□□ 1.53
HOXC9-201ENST00000303450 KDELC1Q6UW63 502 aa24.63■■□□□ 1.53
HOXC9-201ENST00000303450 C4orf22Q6V702 233 aa24.63■■□□□ 1.53
HOXC9-201ENST00000303450 LPCAT2Q7L5N7 544 aa24.63■■□□□ 1.53
HOXC9-201ENST00000303450 LPCAT1Q8NF37 534 aa24.63■■□□□ 1.53
HOXC9-201ENST00000303450 PIH1D2Q8WWB5 315 aa24.63■■□□□ 1.53
HOXC9-201ENST00000303450 TUBB2BQ9BVA1 445 aa24.63■■□□□ 1.53
HOXC9-201ENST00000303450 FSD1LQ9BXM9 530 aa24.63■■□□□ 1.53
HOXC9-201ENST00000303450 PREBQ9HCU5 417 aa24.63■■□□□ 1.53
HOXC9-201ENST00000303450 RPL26L1Q9UNX3 145 aaKnown RBP24.63■■□□□ 1.53
HOXC9-201ENST00000303450 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa24.62■■□□□ 1.53
HOXC9-201ENST00000303450 ESPNB1AK53 854 aa24.62■■□□□ 1.53
HOXC9-201ENST00000303450 AREL1O15033 823 aa24.62■■□□□ 1.53
HOXC9-201ENST00000303450 ITIH2P19823 946 aa24.62■■□□□ 1.53
HOXC9-201ENST00000303450 FDFT1P37268 417 aa24.62■■□□□ 1.53
HOXC9-201ENST00000303450 FAM193AP78312 1265 aa24.62■■□□□ 1.53
HOXC9-201ENST00000303450 ELF2Q15723 593 aa24.62■■□□□ 1.53
HOXC9-201ENST00000303450 PRR23BQ6ZRT6 265 aa24.62■■□□□ 1.53
HOXC9-201ENST00000303450 TMEFF1Q8IYR6 380 aa24.62■■□□□ 1.53
HOXC9-201ENST00000303450 DEFB119Q8N690 84 aa24.62■■□□□ 1.53
HOXC9-201ENST00000303450 SPATA4Q8NEY3 305 aa24.62■■□□□ 1.53
HOXC9-201ENST00000303450 LRRC45Q96CN5 670 aa24.62■■□□□ 1.53
HOXC9-201ENST00000303450 RMDN1Q96DB5 314 aa24.62■■□□□ 1.53
HOXC9-201ENST00000303450 FEM1CQ96JP0 617 aa24.62■■□□□ 1.53
HOXC9-201ENST00000303450 MRGPRX2Q96LB1 330 aa24.62■■□□□ 1.53
HOXC9-201ENST00000303450 RUNDC3BQ96NL0 473 aa24.62■■□□□ 1.53
HOXC9-201ENST00000303450 MLPHQ9BV36 600 aaPredicted RBP24.62■■□□□ 1.53
HOXC9-201ENST00000303450 C6orf106Q9H6K1 298 aaPredicted RBP24.62■■□□□ 1.53
HOXC9-201ENST00000303450 ITM2BQ9Y287 266 aa24.62■■□□□ 1.53
HOXC9-201ENST00000303450 MUC6Q6W4X9 2439 aa24.62■■□□□ 1.53
HOXC9-201ENST00000303450 SPAG17Q6Q759 2223 aa24.62■■□□□ 1.53
HOXC9-201ENST00000303450 THADAQ6YHU6 1953 aa24.62■■□□□ 1.53
HOXC9-201ENST00000303450 RIOK3O14730 519 aaKnown RBP24.61■■□□□ 1.53
HOXC9-201ENST00000303450 TSPAN6O43657 245 aa24.61■■□□□ 1.53
HOXC9-201ENST00000303450 ECEL1O95672 775 aa24.61■■□□□ 1.53
HOXC9-201ENST00000303450 KRT14P02533 472 aa24.61■■□□□ 1.53
HOXC9-201ENST00000303450 GALNT3Q14435 633 aa24.61■■□□□ 1.53
HOXC9-201ENST00000303450 TRIP13Q15645 432 aaPredicted RBP24.61■■□□□ 1.53
HOXC9-201ENST00000303450 WHAMMP3Q1A5X7 153 aa24.61■■□□□ 1.53
HOXC9-201ENST00000303450 PLK5Q496M5 336 aa24.61■■□□□ 1.53
HOXC9-201ENST00000303450 USP45Q70EL2 814 aa24.61■■□□□ 1.53
HOXC9-201ENST00000303450 CADM4Q8NFZ8 388 aa24.61■■□□□ 1.53
HOXC9-201ENST00000303450 TRIB3Q96RU7 358 aa24.61■■□□□ 1.53
HOXC9-201ENST00000303450 PCED1AQ9H1Q7 454 aa24.61■■□□□ 1.53
HOXC9-201ENST00000303450 ETNK1Q9HBU6 452 aa24.61■■□□□ 1.53
HOXC9-201ENST00000303450 RAB6BQ9NRW1 208 aa24.61■■□□□ 1.53
HOXC9-201ENST00000303450 PCYOX1Q9UHG3 505 aa24.61■■□□□ 1.53
HOXC9-201ENST00000303450 GGT7Q9UJ14 662 aa24.61■■□□□ 1.53
HOXC9-201ENST00000303450 ANKRD66B4E2M5 251 aa24.61■■□□□ 1.53
HOXC9-201ENST00000303450 RHOBTB1O94844 696 aa24.61■■□□□ 1.53
HOXC9-201ENST00000303450 NDST3O95803 873 aa24.61■■□□□ 1.53
HOXC9-201ENST00000303450 EPOP01588 193 aa24.61■■□□□ 1.53
HOXC9-201ENST00000303450 CTPS1P17812 591 aa24.61■■□□□ 1.53
HOXC9-201ENST00000303450 GRIA4P48058 902 aa24.61■■□□□ 1.53
HOXC9-201ENST00000303450 SPDYCQ5MJ68 293 aa24.61■■□□□ 1.53
HOXC9-201ENST00000303450 NEK5Q6P3R8 708 aa24.61■■□□□ 1.53
HOXC9-201ENST00000303450 FOXJ1Q92949 421 aa24.61■■□□□ 1.53
HOXC9-201ENST00000303450 SCRN2Q96FV2 425 aa24.61■■□□□ 1.53
HOXC9-201ENST00000303450 DUSP15Q9H1R2 295 aaPredicted RBP24.61■■□□□ 1.53
HOXC9-201ENST00000303450 PPIL1Q9Y3C6 166 aa24.61■■□□□ 1.53
HOXC9-201ENST00000303450 MRFAP1Q9Y605 127 aa24.61■■□□□ 1.53
HOXC9-201ENST00000303450 CEP192Q8TEP8 1941 aa24.6■■□□□ 1.53
HOXC9-201ENST00000303450 SDK1Q7Z5N4 2213 aa24.6■■□□□ 1.53
HOXC9-201ENST00000303450 A0A0J9YYE9 177 aa24.6■■□□□ 1.53
HOXC9-201ENST00000303450 LOC285095A0A1B0GVY8 99 aa24.6■■□□□ 1.53
HOXC9-201ENST00000303450 E7EVH7 732 aa24.6■■□□□ 1.53
HOXC9-201ENST00000303450 PSMD3O43242 534 aa24.6■■□□□ 1.53
HOXC9-201ENST00000303450 SPINT1O43278 529 aa24.6■■□□□ 1.53
HOXC9-201ENST00000303450 ZNF500O60304 480 aaPredicted RBP24.6■■□□□ 1.53
HOXC9-201ENST00000303450 RNGTTO60942 597 aaKnown RBP24.6■■□□□ 1.53
HOXC9-201ENST00000303450 FSBPO95073 299 aa24.6■■□□□ 1.53
HOXC9-201ENST00000303450 TRBC1P01850 177 aa24.6■■□□□ 1.53
HOXC9-201ENST00000303450 CYP2A6P11509 494 aaPredicted RBP24.6■■□□□ 1.53
HOXC9-201ENST00000303450 MMP12P39900 470 aa24.6■■□□□ 1.53
HOXC9-201ENST00000303450 VPS41P49754 854 aa24.6■■□□□ 1.53
HOXC9-201ENST00000303450 SEMG2Q02383 582 aa24.6■■□□□ 1.53
HOXC9-201ENST00000303450 PPP1R7Q15435 360 aa24.6■■□□□ 1.53
HOXC9-201ENST00000303450 KCTD19Q17RG1 926 aaPredicted RBP24.6■■□□□ 1.53
HOXC9-201ENST00000303450 PMS2CLQ68D20 193 aa24.6■■□□□ 1.53
HOXC9-201ENST00000303450 KIAA0895LQ68EN5 471 aa24.6■■□□□ 1.53
HOXC9-201ENST00000303450 ZC3H10Q96K80 434 aaKnown RBP24.6■■□□□ 1.53
HOXC9-201ENST00000303450 FICDQ9BVA6 458 aa24.6■■□□□ 1.53
HOXC9-201ENST00000303450 ALPIP09923 528 aa24.59■■□□□ 1.53
HOXC9-201ENST00000303450 LMAN1P49257 510 aa24.59■■□□□ 1.53
HOXC9-201ENST00000303450 QPCTQ16769 361 aa24.59■■□□□ 1.53
HOXC9-201ENST00000303450 PDCD7Q8N8D1 485 aaKnown RBP24.59■■□□□ 1.53
HOXC9-201ENST00000303450 CXorf40AQ8TE69 158 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms