RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 PCDHB9Q9Y5E1 797 aa13.07□□□□□ -0.32
CCDC7-202ENST00000302316 PSAT1Q9Y617 370 aa13.07□□□□□ -0.32
CCDC7-202ENST00000302316 ARL5AQ9Y689 179 aa13.07□□□□□ -0.32
CCDC7-202ENST00000302316 MROH6A6NGR9 719 aa13.07□□□□□ -0.32
CCDC7-202ENST00000302316 ANKRD66B4E2M5 251 aa13.07□□□□□ -0.32
CCDC7-202ENST00000302316 TRIM49D1C9J1S8 452 aa13.07□□□□□ -0.32
CCDC7-202ENST00000302316 LDB2O43679 373 aa13.07□□□□□ -0.32
CCDC7-202ENST00000302316 MT-ND3P03897 115 aa13.07□□□□□ -0.32
CCDC7-202ENST00000302316 POU3F3P20264 500 aaPredicted RBP13.07□□□□□ -0.32
CCDC7-202ENST00000302316 GP5P40197 560 aa13.07□□□□□ -0.32
CCDC7-202ENST00000302316 NNMTP40261 264 aa13.07□□□□□ -0.32
CCDC7-202ENST00000302316 KDSRQ06136 332 aa13.07□□□□□ -0.32
CCDC7-202ENST00000302316 GAB4Q2WGN9 574 aa13.07□□□□□ -0.32
CCDC7-202ENST00000302316 ARMC12Q5T9G4 340 aa13.07□□□□□ -0.32
CCDC7-202ENST00000302316 TEDDM1Q5T9Z0 273 aa13.07□□□□□ -0.32
CCDC7-202ENST00000302316 Q6ZVU0 165 aa13.07□□□□□ -0.32
CCDC7-202ENST00000302316 GLT6D1Q7Z4J2 308 aa13.07□□□□□ -0.32
CCDC7-202ENST00000302316 SMRP1Q8NCR6 262 aa13.07□□□□□ -0.32
CCDC7-202ENST00000302316 TTC8Q8TAM2 541 aa13.07□□□□□ -0.32
CCDC7-202ENST00000302316 BRSK1Q8TDC3 778 aa13.07□□□□□ -0.32
CCDC7-202ENST00000302316 FAM161BQ96MY7 647 aa13.07□□□□□ -0.32
CCDC7-202ENST00000302316 KCNK9Q9NPC2 374 aa13.07□□□□□ -0.32
CCDC7-202ENST00000302316 HECAQ9UBI9 543 aaPredicted RBP13.07□□□□□ -0.32
CCDC7-202ENST00000302316 SPO11Q9Y5K1 396 aa13.07□□□□□ -0.32
CCDC7-202ENST00000302316 COL4A3Q01955 1670 aa13.07□□□□□ -0.32
CCDC7-202ENST00000302316 ANKRD36A6QL64 1941 aa13.06□□□□□ -0.32
CCDC7-202ENST00000302316 TMEM120BA0PK00 339 aa13.06□□□□□ -0.32
CCDC7-202ENST00000302316 FZD6O60353 706 aa13.06□□□□□ -0.32
CCDC7-202ENST00000302316 SOCS5O75159 536 aa13.06□□□□□ -0.32
CCDC7-202ENST00000302316 PGLSO95336 258 aa13.06□□□□□ -0.32
CCDC7-202ENST00000302316 CRTAMO95727 393 aa13.06□□□□□ -0.32
CCDC7-202ENST00000302316 ASLP04424 464 aa13.06□□□□□ -0.32
CCDC7-202ENST00000302316 ATP5BP06576 529 aaKnown RBP13.06□□□□□ -0.32
CCDC7-202ENST00000302316 SP100P23497 879 aaPredicted RBP13.06□□□□□ -0.32
CCDC7-202ENST00000302316 CNTFP26441 200 aa13.06□□□□□ -0.32
CCDC7-202ENST00000302316 ARNTP27540 789 aa13.06□□□□□ -0.32
CCDC7-202ENST00000302316 SERPINA4P29622 427 aa13.06□□□□□ -0.32
CCDC7-202ENST00000302316 SLC6A11P48066 632 aa13.06□□□□□ -0.32
CCDC7-202ENST00000302316 ARCN1P48444 511 aaKnown RBP13.06□□□□□ -0.32
CCDC7-202ENST00000302316 CCNHP51946 323 aaPredicted RBP13.06□□□□□ -0.32
CCDC7-202ENST00000302316 RUNX3Q13761 415 aa13.06□□□□□ -0.32
CCDC7-202ENST00000302316 THOC5Q13769 683 aaKnown RBP13.06□□□□□ -0.32
CCDC7-202ENST00000302316 COL19A1Q14993 1142 aa13.06□□□□□ -0.32
CCDC7-202ENST00000302316 QPCTQ16769 361 aa13.06□□□□□ -0.32
CCDC7-202ENST00000302316 CARD16Q5EG05 197 aa13.06□□□□□ -0.32
CCDC7-202ENST00000302316 MROH9Q5TGP6 573 aa13.06□□□□□ -0.32
CCDC7-202ENST00000302316 OR13J1Q8NGT2 312 aa13.06□□□□□ -0.32
CCDC7-202ENST00000302316 MDM1Q8TC05 714 aa13.06□□□□□ -0.32
CCDC7-202ENST00000302316 MTBPQ96DY7 904 aa13.06□□□□□ -0.32
CCDC7-202ENST00000302316 MRGPRX3Q96LB0 322 aa13.06□□□□□ -0.32
CCDC7-202ENST00000302316 NECTIN4Q96NY8 510 aa13.06□□□□□ -0.32
CCDC7-202ENST00000302316 CAPS2Q9BXY5 557 aa13.06□□□□□ -0.32
CCDC7-202ENST00000302316 NSMCE4AQ9NXX6 385 aa13.06□□□□□ -0.32
CCDC7-202ENST00000302316 GTSE1Q9NYZ3 720 aa13.06□□□□□ -0.32
CCDC7-202ENST00000302316 TRAFD1O14545 582 aaPredicted RBP13.06□□□□□ -0.32
CCDC7-202ENST00000302316 BUD23O43709 281 aaKnown RBP13.06□□□□□ -0.32
CCDC7-202ENST00000302316 SLC4A1P02730 911 aa13.06□□□□□ -0.32
CCDC7-202ENST00000302316 DLDP09622 509 aaKnown RBP13.06□□□□□ -0.32
CCDC7-202ENST00000302316 KRT4P19013 534 aa13.06□□□□□ -0.32
CCDC7-202ENST00000302316 GDI1P31150 447 aa13.06□□□□□ -0.32
CCDC7-202ENST00000302316 SLC8A1P32418 973 aa13.06□□□□□ -0.32
CCDC7-202ENST00000302316 RECQLP46063 649 aaPredicted RBP13.06□□□□□ -0.32
CCDC7-202ENST00000302316 GRIA4P48058 902 aa13.06□□□□□ -0.32
CCDC7-202ENST00000302316 GUCY1A3Q02108 690 aa13.06□□□□□ -0.32
CCDC7-202ENST00000302316 MYLK3Q32MK0 819 aa13.06□□□□□ -0.32
CCDC7-202ENST00000302316 TTC19Q6DKK2 380 aaPredicted RBP13.06□□□□□ -0.32
CCDC7-202ENST00000302316 STRA8Q7Z7C7 330 aa13.06□□□□□ -0.32
CCDC7-202ENST00000302316 SMIM14Q96QK8 99 aa13.06□□□□□ -0.32
CCDC7-202ENST00000302316 GAS2L1Q99501 681 aaPredicted RBP13.06□□□□□ -0.32
CCDC7-202ENST00000302316 KLF6Q99612 283 aaPredicted RBP13.06□□□□□ -0.32
CCDC7-202ENST00000302316 ZDHHC6Q9H6R6 413 aa13.06□□□□□ -0.32
CCDC7-202ENST00000302316 SLC8A2Q9UPR5 921 aa13.06□□□□□ -0.32
CCDC7-202ENST00000302316 USP15Q9Y4E8 981 aaPredicted RBP13.06□□□□□ -0.32
CCDC7-202ENST00000302316 KCTD3Q9Y597 815 aa13.06□□□□□ -0.32
CCDC7-202ENST00000302316 GOLGA8RI6L899 631 aa13.05□□□□□ -0.32
CCDC7-202ENST00000302316 CCL22O00626 93 aa13.05□□□□□ -0.32
CCDC7-202ENST00000302316 HTRA2O43464 458 aaPredicted RBP13.05□□□□□ -0.32
CCDC7-202ENST00000302316 SPAG7O75391 227 aa13.05□□□□□ -0.32
CCDC7-202ENST00000302316 ECI2O75521 394 aa13.05□□□□□ -0.32
CCDC7-202ENST00000302316 SRPRAP08240 638 aaKnown RBP13.05□□□□□ -0.32
CCDC7-202ENST00000302316 F7P08709 466 aaPredicted RBP13.05□□□□□ -0.32
CCDC7-202ENST00000302316 CHN1P15882 459 aa13.05□□□□□ -0.32
CCDC7-202ENST00000302316 MDH1P40925 334 aaKnown RBP13.05□□□□□ -0.32
CCDC7-202ENST00000302316 PRAMEP78395 509 aa13.05□□□□□ -0.32
CCDC7-202ENST00000302316 TMPRSS15P98073 1019 aa13.05□□□□□ -0.32
CCDC7-202ENST00000302316 RAD51Q06609 339 aa13.05□□□□□ -0.32
CCDC7-202ENST00000302316 MESP2Q0VG99 397 aa13.05□□□□□ -0.32
CCDC7-202ENST00000302316 GRTP1Q5TC63 336 aa13.05□□□□□ -0.32
CCDC7-202ENST00000302316 DPY19L3Q6ZPD9 716 aa13.05□□□□□ -0.32
CCDC7-202ENST00000302316 MTSS1LQ765P7 747 aa13.05□□□□□ -0.32
CCDC7-202ENST00000302316 CNTN4Q8IWV2 1026 aa13.05□□□□□ -0.32
CCDC7-202ENST00000302316 ANKRD42Q8N9B4 389 aa13.05□□□□□ -0.32
CCDC7-202ENST00000302316 STYXQ8WUJ0 223 aa13.05□□□□□ -0.32
CCDC7-202ENST00000302316 PTPRN2Q92932 1015 aa13.05□□□□□ -0.32
CCDC7-202ENST00000302316 PEX13Q92968 403 aa13.05□□□□□ -0.32
CCDC7-202ENST00000302316 SERAC1Q96JX3 654 aa13.05□□□□□ -0.32
CCDC7-202ENST00000302316 DNAJC1Q96KC8 554 aaKnown RBP13.05□□□□□ -0.32
CCDC7-202ENST00000302316 TUBGCP5Q96RT8 1024 aa13.05□□□□□ -0.32
CCDC7-202ENST00000302316 RBBP8Q99708 897 aa13.05□□□□□ -0.32
CCDC7-202ENST00000302316 FAM167BQ9BTA0 163 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms