RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 RMDN1Q96DB5 314 aa22.41■■□□□ 1.18
SMAD1-201ENST00000302085 LMLNQ96KR4 655 aa22.41■■□□□ 1.18
SMAD1-201ENST00000302085 SMIM14Q96QK8 99 aa22.41■■□□□ 1.18
SMAD1-201ENST00000302085 C2orf49Q9BVC5 232 aaPredicted RBP22.41■■□□□ 1.18
SMAD1-201ENST00000302085 KDM4CQ9H3R0 1056 aa22.41■■□□□ 1.18
SMAD1-201ENST00000302085 SUDS3Q9H7L9 328 aaPredicted RBP22.41■■□□□ 1.18
SMAD1-201ENST00000302085 FBXO6Q9NRD1 293 aaPredicted RBP22.41■■□□□ 1.18
SMAD1-201ENST00000302085 KLHL14Q9P2G3 628 aa22.41■■□□□ 1.18
SMAD1-201ENST00000302085 CCDC195A0A1B0GUA6 201 aa22.41■■□□□ 1.18
SMAD1-201ENST00000302085 FAM95CA0A1B0GW59 222 aa22.41■■□□□ 1.18
SMAD1-201ENST00000302085 OR51F1A6NGY5 319 aa22.41■■□□□ 1.18
SMAD1-201ENST00000302085 SMAD6O43541 496 aaKnown RBP22.41■■□□□ 1.18
SMAD1-201ENST00000302085 XYLBO75191 536 aa22.41■■□□□ 1.18
SMAD1-201ENST00000302085 IL1BP01584 269 aa22.41■■□□□ 1.18
SMAD1-201ENST00000302085 LEPRP48357 1165 aaKnown RBP22.41■■□□□ 1.18
SMAD1-201ENST00000302085 BST1Q10588 318 aa22.41■■□□□ 1.18
SMAD1-201ENST00000302085 SPRED3Q2MJR0 410 aa22.41■■□□□ 1.18
SMAD1-201ENST00000302085 ATXN7L2Q5T6C5 722 aaPredicted RBP22.41■■□□□ 1.18
SMAD1-201ENST00000302085 RMDN2Q96LZ7 410 aa22.41■■□□□ 1.18
SMAD1-201ENST00000302085 HTATIP2Q9BUP3 242 aa22.41■■□□□ 1.18
SMAD1-201ENST00000302085 ABCF3Q9NUQ8 709 aa22.41■■□□□ 1.18
SMAD1-201ENST00000302085 TDP1Q9NUW8 608 aa22.41■■□□□ 1.18
SMAD1-201ENST00000302085 INTS6Q9UL03 887 aaKnown RBP22.41■■□□□ 1.18
SMAD1-201ENST00000302085 RIMKLBQ9ULI2 386 aa22.41■■□□□ 1.18
SMAD1-201ENST00000302085 HELZP42694 1942 aaKnown RBP22.41■■□□□ 1.18
SMAD1-201ENST00000302085 PHGDHO43175 533 aaKnown RBP22.4■■□□□ 1.18
SMAD1-201ENST00000302085 PRAMEP78395 509 aa22.4■■□□□ 1.18
SMAD1-201ENST00000302085 GPM6BQ13491 265 aa22.4■■□□□ 1.18
SMAD1-201ENST00000302085 RETSATQ6NUM9 610 aa22.4■■□□□ 1.18
SMAD1-201ENST00000302085 GRASPQ7Z6J2 395 aaPredicted RBP22.4■■□□□ 1.18
SMAD1-201ENST00000302085 RBM23Q86U06 439 aaKnown RBP22.4■■□□□ 1.18
SMAD1-201ENST00000302085 CILP2Q8IUL8 1156 aa22.4■■□□□ 1.18
SMAD1-201ENST00000302085 CEP97Q8IW35 865 aa22.4■■□□□ 1.18
SMAD1-201ENST00000302085 LPCAT1Q8NF37 534 aa22.4■■□□□ 1.18
SMAD1-201ENST00000302085 OR13C4Q8NGS5 318 aa22.4■■□□□ 1.18
SMAD1-201ENST00000302085 RAB3IL1Q8TBN0 382 aa22.4■■□□□ 1.18
SMAD1-201ENST00000302085 ZSWIM3Q96MP5 696 aa22.4■■□□□ 1.18
SMAD1-201ENST00000302085 PLCD4Q9BRC7 762 aa22.4■■□□□ 1.18
SMAD1-201ENST00000302085 C1QTNF1Q9BXJ1 281 aa22.4■■□□□ 1.18
SMAD1-201ENST00000302085 NPHS2Q9NP85 383 aa22.4■■□□□ 1.18
SMAD1-201ENST00000302085 MARCH4Q9P2E8 410 aaPredicted RBP22.4■■□□□ 1.18
SMAD1-201ENST00000302085 TLK1Q9UKI8 766 aa22.4■■□□□ 1.18
SMAD1-201ENST00000302085 CYBBP04839 570 aa22.39■■□□□ 1.18
SMAD1-201ENST00000302085 PLK1P53350 603 aa22.39■■□□□ 1.18
SMAD1-201ENST00000302085 PCLAFQ15004 111 aa22.39■■□□□ 1.18
SMAD1-201ENST00000302085 ATG16L1Q676U5 607 aa22.39■■□□□ 1.18
SMAD1-201ENST00000302085 RAPH1Q70E73 1250 aa22.39■■□□□ 1.18
SMAD1-201ENST00000302085 LDB1Q86U70 411 aaPredicted RBP22.39■■□□□ 1.18
SMAD1-201ENST00000302085 TMEM25Q86YD3 366 aa22.39■■□□□ 1.18
SMAD1-201ENST00000302085 LEMD2Q8NC56 503 aa22.39■■□□□ 1.18
SMAD1-201ENST00000302085 MDGA1Q8NFP4 955 aa22.39■■□□□ 1.18
SMAD1-201ENST00000302085 STYXQ8WUJ0 223 aa22.39■■□□□ 1.18
SMAD1-201ENST00000302085 C10orf82Q8WW14 230 aa22.39■■□□□ 1.18
SMAD1-201ENST00000302085 ZNF707Q96C28 371 aaPredicted RBP22.39■■□□□ 1.18
SMAD1-201ENST00000302085 ZNF395Q9H8N7 513 aaPredicted RBP22.39■■□□□ 1.18
SMAD1-201ENST00000302085 ANKRD6Q9Y2G4 727 aa22.39■■□□□ 1.18
SMAD1-201ENST00000302085 CCDC162PA2VCL2 907 aa22.39■■□□□ 1.17
SMAD1-201ENST00000302085 SOBPA7XYQ1 873 aa22.39■■□□□ 1.17
SMAD1-201ENST00000302085 RPP40O75818 363 aaKnown RBP22.39■■□□□ 1.17
SMAD1-201ENST00000302085 PRAMEF12O95522 483 aa22.39■■□□□ 1.17
SMAD1-201ENST00000302085 S1PR4O95977 384 aa22.39■■□□□ 1.17
SMAD1-201ENST00000302085 SLC35E2BP0CK96 405 aa22.39■■□□□ 1.17
SMAD1-201ENST00000302085 KCNA4P22459 653 aa22.39■■□□□ 1.17
SMAD1-201ENST00000302085 SLC8A1P32418 973 aa22.39■■□□□ 1.17
SMAD1-201ENST00000302085 TAS2R39P59534 338 aa22.39■■□□□ 1.17
SMAD1-201ENST00000302085 DBN1Q16643 649 aa22.39■■□□□ 1.17
SMAD1-201ENST00000302085 PLEKHG6Q3KR16 790 aa22.39■■□□□ 1.17
SMAD1-201ENST00000302085 CCDC153Q494R4 210 aa22.39■■□□□ 1.17
SMAD1-201ENST00000302085 MBLAC2Q68D91 279 aa22.39■■□□□ 1.17
SMAD1-201ENST00000302085 GABPB2Q8TAK5 448 aaPredicted RBP22.39■■□□□ 1.17
SMAD1-201ENST00000302085 ACDQ96AP0 544 aa22.39■■□□□ 1.17
SMAD1-201ENST00000302085 ELMO2Q96JJ3 720 aa22.39■■□□□ 1.17
SMAD1-201ENST00000302085 OMDQ99983 421 aa22.39■■□□□ 1.17
SMAD1-201ENST00000302085 CRTAMO95727 393 aa22.38■■□□□ 1.17
SMAD1-201ENST00000302085 GOT2P00505 430 aaKnown RBP22.38■■□□□ 1.17
SMAD1-201ENST00000302085 FGF3P11487 239 aaPredicted RBP22.38■■□□□ 1.17
SMAD1-201ENST00000302085 ZNF140P52738 457 aaPredicted RBP22.38■■□□□ 1.17
SMAD1-201ENST00000302085 ERVK-21P61565 698 aa22.38■■□□□ 1.17
SMAD1-201ENST00000302085 SHHQ15465 462 aa22.38■■□□□ 1.17
SMAD1-201ENST00000302085 TAF1AQ15573 450 aaPredicted RBP22.38■■□□□ 1.17
SMAD1-201ENST00000302085 LACTB2Q53H82 288 aaPredicted RBP22.38■■□□□ 1.17
SMAD1-201ENST00000302085 RBM20Q5T481 1227 aaKnown RBP22.38■■□□□ 1.17
SMAD1-201ENST00000302085 PDE12Q6L8Q7 609 aaKnown RBP22.38■■□□□ 1.17
SMAD1-201ENST00000302085 GALNT7Q86SF2 657 aa22.38■■□□□ 1.17
SMAD1-201ENST00000302085 GPATCH11Q8N954 259 aa22.38■■□□□ 1.17
SMAD1-201ENST00000302085 RFWD2Q8NHY2 731 aa22.38■■□□□ 1.17
SMAD1-201ENST00000302085 ADGRE3Q9BY15 652 aa22.38■■□□□ 1.17
SMAD1-201ENST00000302085 LINC00597Q9H2U6 94 aa22.38■■□□□ 1.17
SMAD1-201ENST00000302085 NLE1Q9NVX2 485 aaPredicted RBP22.38■■□□□ 1.17
SMAD1-201ENST00000302085 ZDHHC7Q9NXF8 308 aa22.38■■□□□ 1.17
SMAD1-201ENST00000302085 COPG2Q9UBF2 871 aa22.38■■□□□ 1.17
SMAD1-201ENST00000302085 HCFC2Q9Y5Z7 792 aa22.38■■□□□ 1.17
SMAD1-201ENST00000302085 LAMA2P24043 3122 aaKnown RBP22.38■■□□□ 1.17
SMAD1-201ENST00000302085 ANKRD66B4E2M5 251 aa22.38■■□□□ 1.17
SMAD1-201ENST00000302085 SNNO75324 88 aaPredicted RBP22.38■■□□□ 1.17
SMAD1-201ENST00000302085 TGDSO95455 350 aa22.38■■□□□ 1.17
SMAD1-201ENST00000302085 RAB10P61026 200 aa22.38■■□□□ 1.17
SMAD1-201ENST00000302085 OCRLQ01968 901 aa22.38■■□□□ 1.17
SMAD1-201ENST00000302085 SLC12A1Q13621 1099 aa22.38■■□□□ 1.17
SMAD1-201ENST00000302085 RALGPS1Q5JS13 557 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms