RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 SNX1Q13596 522 aa21.33■■□□□ 1.01
SMCO4-201ENST00000298966 PDK1Q15118 436 aa21.33■■□□□ 1.01
SMCO4-201ENST00000298966 MBLAC2Q68D91 279 aa21.33■■□□□ 1.01
SMCO4-201ENST00000298966 DUPD1Q68J44 220 aa21.33■■□□□ 1.01
SMCO4-201ENST00000298966 MTERF4Q7Z6M4 381 aaKnown RBP21.33■■□□□ 1.01
SMCO4-201ENST00000298966 CASKIN2Q8WXE0 1202 aa21.33■■□□□ 1.01
SMCO4-201ENST00000298966 TMA16Q96EY4 203 aaKnown RBP21.33■■□□□ 1.01
SMCO4-201ENST00000298966 PABPC3Q9H361 631 aaKnown RBP21.33■■□□□ 1.01
SMCO4-201ENST00000298966 FBXL12Q9NXK8 326 aa21.33■■□□□ 1.01
SMCO4-201ENST00000298966 LRRC72A6NJI9 287 aa21.32■■□□□ 1
SMCO4-201ENST00000298966 ATP8B1O43520 1251 aa21.32■■□□□ 1
SMCO4-201ENST00000298966 PECAM1P16284 738 aaPredicted RBP21.32■■□□□ 1
SMCO4-201ENST00000298966 POLR2EP19388 210 aaKnown RBP21.32■■□□□ 1
SMCO4-201ENST00000298966 CD38P28907 300 aa21.32■■□□□ 1
SMCO4-201ENST00000298966 KCNJ1P48048 391 aa21.32■■□□□ 1
SMCO4-201ENST00000298966 ARRB1P49407 418 aaPredicted RBP21.32■■□□□ 1
SMCO4-201ENST00000298966 ILKQ13418 452 aa21.32■■□□□ 1
SMCO4-201ENST00000298966 SHBQ15464 509 aa21.32■■□□□ 1
SMCO4-201ENST00000298966 BEND6Q5SZJ8 279 aaPredicted RBP21.32■■□□□ 1
SMCO4-201ENST00000298966 GSTA5Q7RTV2 222 aa21.32■■□□□ 1
SMCO4-201ENST00000298966 KIAA0907Q7Z7F0 614 aaPredicted RBP21.32■■□□□ 1
SMCO4-201ENST00000298966 LRRC49Q8IUZ0 686 aa21.32■■□□□ 1
SMCO4-201ENST00000298966 AENQ8WTP8 325 aaKnown RBP21.32■■□□□ 1
SMCO4-201ENST00000298966 SIK2Q9H0K1 926 aa21.32■■□□□ 1
SMCO4-201ENST00000298966 RSPH9Q9H1X1 276 aaPredicted RBP21.32■■□□□ 1
SMCO4-201ENST00000298966 PCDH9Q9HC56 1237 aa21.32■■□□□ 1
SMCO4-201ENST00000298966 HS3ST4Q9Y661 456 aa21.32■■□□□ 1
SMCO4-201ENST00000298966 ARID1BQ8NFD5 2236 aaPredicted RBP21.31■■□□□ 1
SMCO4-201ENST00000298966 IGLV3-10A0A075B6K4 115 aa21.31■■□□□ 1
SMCO4-201ENST00000298966 ZSCAN5CA6NGD5 496 aaPredicted RBP21.31■■□□□ 1
SMCO4-201ENST00000298966 BRINP1O60477 761 aa21.31■■□□□ 1
SMCO4-201ENST00000298966 RNASEH1O60930 286 aaKnown RBP21.31■■□□□ 1
SMCO4-201ENST00000298966 MOCS2O96007 188 aaPredicted RBP21.31■■□□□ 1
SMCO4-201ENST00000298966 WNT1P04628 370 aa21.31■■□□□ 1
SMCO4-201ENST00000298966 EPHA8P29322 1005 aaPredicted RBP21.31■■□□□ 1
SMCO4-201ENST00000298966 CXADRP78310 365 aa21.31■■□□□ 1
SMCO4-201ENST00000298966 CAV1Q03135 178 aa21.31■■□□□ 1
SMCO4-201ENST00000298966 TLE3Q04726 772 aa21.31■■□□□ 1
SMCO4-201ENST00000298966 C5orf22Q49AR2 442 aa21.31■■□□□ 1
SMCO4-201ENST00000298966 MS4A13Q5J8X5 152 aa21.31■■□□□ 1
SMCO4-201ENST00000298966 EMBQ6PCB8 327 aa21.31■■□□□ 1
SMCO4-201ENST00000298966 NCEH1Q6PIU2 408 aa21.31■■□□□ 1
SMCO4-201ENST00000298966 OLFM3Q96PB7 478 aa21.31■■□□□ 1
SMCO4-201ENST00000298966 TRIM51Q9BSJ1 452 aa21.31■■□□□ 1
SMCO4-201ENST00000298966 TMPRSS4Q9NRS4 437 aa21.31■■□□□ 1
SMCO4-201ENST00000298966 WHRNQ9P202 907 aa21.31■■□□□ 1
SMCO4-201ENST00000298966 HEY1Q9Y5J3 304 aa21.31■■□□□ 1
SMCO4-201ENST00000298966 MYO18BQ8IUG5 2567 aa21.31■■□□□ 1
SMCO4-201ENST00000298966 FAM72CH0Y354 149 aa21.3■■□□□ 1
SMCO4-201ENST00000298966 H7C0C1 242 aa21.3■■□□□ 1
SMCO4-201ENST00000298966 MTSS1O43312 755 aa21.3■■□□□ 1
SMCO4-201ENST00000298966 ACSL4O60488 711 aa21.3■■□□□ 1
SMCO4-201ENST00000298966 MYBL2P10244 700 aa21.3■■□□□ 1
SMCO4-201ENST00000298966 RHOQP17081 205 aa21.3■■□□□ 1
SMCO4-201ENST00000298966 ATP5OP48047 213 aa21.3■■□□□ 1
SMCO4-201ENST00000298966 CARSP49589 748 aaKnown RBP21.3■■□□□ 1
SMCO4-201ENST00000298966 ST8SIA6P61647 398 aa21.3■■□□□ 1
SMCO4-201ENST00000298966 TAF1BQ53T94 588 aaPredicted RBP21.3■■□□□ 1
SMCO4-201ENST00000298966 SLC45A4Q5BKX6 768 aa21.3■■□□□ 1
SMCO4-201ENST00000298966 ADGRF1Q5T601 910 aa21.3■■□□□ 1
SMCO4-201ENST00000298966 FAM72AQ5TYM5 149 aa21.3■■□□□ 1
SMCO4-201ENST00000298966 PIK3R6Q5UE93 754 aa21.3■■□□□ 1
SMCO4-201ENST00000298966 FAM72DQ6L9T8 149 aa21.3■■□□□ 1
SMCO4-201ENST00000298966 DARS2Q6PI48 645 aaKnown RBP21.3■■□□□ 1
SMCO4-201ENST00000298966 FAM72BQ86X60 149 aa21.3■■□□□ 1
SMCO4-201ENST00000298966 LRRC45Q96CN5 670 aa21.3■■□□□ 1
SMCO4-201ENST00000298966 RTP4Q96DX8 246 aa21.3■■□□□ 1
SMCO4-201ENST00000298966 ZYG11BQ9C0D3 744 aa21.3■■□□□ 1
SMCO4-201ENST00000298966 DTLQ9NZJ0 730 aa21.3■■□□□ 1
SMCO4-201ENST00000298966 STOML2Q9UJZ1 356 aa21.3■■□□□ 1
SMCO4-201ENST00000298966 NEU2Q9Y3R4 380 aa21.3■■□□□ 1
SMCO4-201ENST00000298966 MGAQ8IWI9 3026 aa21.29■■□□□ 1
SMCO4-201ENST00000298966 DRGXA6NNA5 263 aa21.29■■□□□ 1
SMCO4-201ENST00000298966 F5H5T6 163 aa21.29■■□□□ 1
SMCO4-201ENST00000298966 SMAPO00193 183 aa21.29■■□□□ 1
SMCO4-201ENST00000298966 KRT14P02533 472 aa21.29■■□□□ 1
SMCO4-201ENST00000298966 ITIH2P19823 946 aa21.29■■□□□ 1
SMCO4-201ENST00000298966 GLDCP23378 1020 aa21.29■■□□□ 1
SMCO4-201ENST00000298966 CALCOCO2Q13137 446 aa21.29■■□□□ 1
SMCO4-201ENST00000298966 AUHQ13825 339 aaKnown RBP21.29■■□□□ 1
SMCO4-201ENST00000298966 TTC39BQ5VTQ0 682 aaPredicted RBP21.29■■□□□ 1
SMCO4-201ENST00000298966 SPACA3Q8IXA5 215 aa21.29■■□□□ 1
SMCO4-201ENST00000298966 CACTIN-AS1Q8N1I8 211 aa21.29■■□□□ 1
SMCO4-201ENST00000298966 OXR1Q8N573 874 aa21.29■■□□□ 1
SMCO4-201ENST00000298966 RTL3Q8N8U3 475 aaKnown RBP21.29■■□□□ 1
SMCO4-201ENST00000298966 ZNF557Q8N988 423 aaPredicted RBP21.29■■□□□ 1
SMCO4-201ENST00000298966 OR2T34Q8NGX1 318 aa21.29■■□□□ 1
SMCO4-201ENST00000298966 CAVIN3Q969G5 261 aa21.29■■□□□ 1
SMCO4-201ENST00000298966 QKIQ96PU8 341 aaKnown RBP eCLIP21.29■■□□□ 1
SMCO4-201ENST00000298966 PRMT1Q99873 361 aaKnown RBP21.29■■□□□ 1
SMCO4-201ENST00000298966 OMDQ99983 421 aa21.29■■□□□ 1
SMCO4-201ENST00000298966 MAGEB5Q9BZ81 275 aa21.29■■□□□ 1
SMCO4-201ENST00000298966 MTG2Q9H4K7 406 aa21.29■■□□□ 1
SMCO4-201ENST00000298966 EBF2Q9HAK2 575 aa21.29■■□□□ 1
SMCO4-201ENST00000298966 ZNF446Q9NWS9 450 aa21.29■■□□□ 1
SMCO4-201ENST00000298966 ASIC3Q9UHC3 531 aa21.29■■□□□ 1
SMCO4-201ENST00000298966 CLCA2Q9UQC9 943 aa21.29■■□□□ 1
SMCO4-201ENST00000298966 A0A1W2PP55 124 aa21.28■■□□□ 1
SMCO4-201ENST00000298966 A0A1W2PR77 199 aa21.28■■□□□ 1
SMCO4-201ENST00000298966 ESYT3A0FGR9 886 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms