RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 VPS28Q9UK41 221 aa24.54■■□□□ 1.52
SPTSSA-201ENST00000298130 DSEQ9UL01 958 aa24.54■■□□□ 1.52
SPTSSA-201ENST00000298130 FAM58BPP0C7Q3 252 aa24.53■■□□□ 1.52
SPTSSA-201ENST00000298130 PIRTP0C851 137 aa24.53■■□□□ 1.52
SPTSSA-201ENST00000298130 ZNF865P0CJ78 1059 aaPredicted RBP24.53■■□□□ 1.52
SPTSSA-201ENST00000298130 ZNF26P17031 533 aaPredicted RBP24.53■■□□□ 1.52
SPTSSA-201ENST00000298130 DSC2Q02487 901 aa24.53■■□□□ 1.52
SPTSSA-201ENST00000298130 HERC3Q15034 1050 aa24.53■■□□□ 1.52
SPTSSA-201ENST00000298130 POTEHQ6S545 545 aa24.53■■□□□ 1.52
SPTSSA-201ENST00000298130 TMEM86AQ8N2M4 240 aa24.53■■□□□ 1.52
SPTSSA-201ENST00000298130 DIS3LQ8TF46 1054 aaKnown RBP24.53■■□□□ 1.52
SPTSSA-201ENST00000298130 SLCO4A1Q96BD0 722 aa24.53■■□□□ 1.52
SPTSSA-201ENST00000298130 DGCR14Q96DF8 476 aaKnown RBP24.53■■□□□ 1.52
SPTSSA-201ENST00000298130 CAMSAP3Q9P1Y5 1249 aaPredicted RBP24.53■■□□□ 1.52
SPTSSA-201ENST00000298130 ZNF839A8K0R7 811 aa24.53■■□□□ 1.52
SPTSSA-201ENST00000298130 H3BSA7 217 aa24.53■■□□□ 1.52
SPTSSA-201ENST00000298130 PLOD2O00469 737 aa24.53■■□□□ 1.52
SPTSSA-201ENST00000298130 TIPRLO75663 272 aa24.53■■□□□ 1.52
SPTSSA-201ENST00000298130 SIX3O95343 332 aaPredicted RBP24.53■■□□□ 1.52
SPTSSA-201ENST00000298130 UGT1A6P19224 532 aa24.53■■□□□ 1.52
SPTSSA-201ENST00000298130 PCSK1P29120 753 aa24.53■■□□□ 1.52
SPTSSA-201ENST00000298130 PCSK6P29122 969 aa24.53■■□□□ 1.52
SPTSSA-201ENST00000298130 GRIK1P39086 918 aa24.53■■□□□ 1.52
SPTSSA-201ENST00000298130 PRKAA2P54646 552 aa24.53■■□□□ 1.52
SPTSSA-201ENST00000298130 SLC10A7Q0GE19 358 aa24.53■■□□□ 1.52
SPTSSA-201ENST00000298130 DYNC1I2Q13409 638 aaKnown RBP24.53■■□□□ 1.52
SPTSSA-201ENST00000298130 LRP8Q14114 963 aa24.53■■□□□ 1.52
SPTSSA-201ENST00000298130 UPP1Q16831 310 aa24.53■■□□□ 1.52
SPTSSA-201ENST00000298130 RPL10LQ96L21 214 aaKnown RBP24.53■■□□□ 1.52
SPTSSA-201ENST00000298130 AGO3Q9H9G7 860 aaKnown RBP24.53■■□□□ 1.52
SPTSSA-201ENST00000298130 HS3ST4Q9Y661 456 aa24.53■■□□□ 1.52
SPTSSA-201ENST00000298130 SMIM31A0A1B0GVY4 71 aa24.52■■□□□ 1.52
SPTSSA-201ENST00000298130 RPS6KA3P51812 740 aa24.52■■□□□ 1.52
SPTSSA-201ENST00000298130 SLC5A3P53794 718 aa24.52■■□□□ 1.52
SPTSSA-201ENST00000298130 HECTD2Q5U5R9 776 aa24.52■■□□□ 1.52
SPTSSA-201ENST00000298130 CYHR1Q6ZMK1 362 aa24.52■■□□□ 1.52
SPTSSA-201ENST00000298130 HERC6Q8IVU3 1022 aa24.52■■□□□ 1.52
SPTSSA-201ENST00000298130 GPR152Q8TDT2 470 aa24.52■■□□□ 1.52
SPTSSA-201ENST00000298130 CSNK1G1Q9HCP0 422 aa24.52■■□□□ 1.52
SPTSSA-201ENST00000298130 ENTPD7Q9NQZ7 604 aa24.52■■□□□ 1.52
SPTSSA-201ENST00000298130 SLC38A7Q9NVC3 462 aa24.52■■□□□ 1.52
SPTSSA-201ENST00000298130 HEMK1Q9Y5R4 338 aaPredicted RBP24.52■■□□□ 1.52
SPTSSA-201ENST00000298130 E9PAM4 449 aa24.52■■□□□ 1.52
SPTSSA-201ENST00000298130 HAS3O00219 553 aa24.52■■□□□ 1.52
SPTSSA-201ENST00000298130 AP1G1O43747 822 aa24.52■■□□□ 1.52
SPTSSA-201ENST00000298130 HAPLN1P10915 354 aaPredicted RBP24.52■■□□□ 1.52
SPTSSA-201ENST00000298130 PAMP19021 973 aa24.52■■□□□ 1.52
SPTSSA-201ENST00000298130 SLC7A2P52569 658 aa24.52■■□□□ 1.52
SPTSSA-201ENST00000298130 HDAC10Q969S8 669 aa24.52■■□□□ 1.52
SPTSSA-201ENST00000298130 TMIGD2Q96BF3 282 aa24.52■■□□□ 1.52
SPTSSA-201ENST00000298130 ASB9Q96DX5 294 aa24.52■■□□□ 1.52
SPTSSA-201ENST00000298130 OSER1Q9NX31 292 aa24.52■■□□□ 1.52
SPTSSA-201ENST00000298130 RNF11Q9Y3C5 154 aa24.52■■□□□ 1.52
SPTSSA-201ENST00000298130 MRASO14807 208 aa24.51■■□□□ 1.51
SPTSSA-201ENST00000298130 PSMD3O43242 534 aa24.51■■□□□ 1.51
SPTSSA-201ENST00000298130 TPST1O60507 370 aa24.51■■□□□ 1.51
SPTSSA-201ENST00000298130 POU4F1Q01851 419 aa24.51■■□□□ 1.51
SPTSSA-201ENST00000298130 GEN1Q17RS7 908 aa24.51■■□□□ 1.51
SPTSSA-201ENST00000298130 HIC2Q96JB3 615 aa24.51■■□□□ 1.51
SPTSSA-201ENST00000298130 LIN28AQ9H9Z2 209 aaKnown RBP24.51■■□□□ 1.51
SPTSSA-201ENST00000298130 RRN3Q9NYV6 651 aa24.51■■□□□ 1.51
SPTSSA-201ENST00000298130 EPS15L1Q9UBC2 864 aa24.51■■□□□ 1.51
SPTSSA-201ENST00000298130 TRAF6Q9Y4K3 522 aa24.51■■□□□ 1.51
SPTSSA-201ENST00000298130 SLC4A7Q9Y6M7 1214 aa24.51■■□□□ 1.51
SPTSSA-201ENST00000298130 hCG_2014768A0A024R1R8 64 aa24.51■■□□□ 1.51
SPTSSA-201ENST00000298130 A0A087X1B8 175 aa24.51■■□□□ 1.51
SPTSSA-201ENST00000298130 CNTN5O94779 1100 aa24.51■■□□□ 1.51
SPTSSA-201ENST00000298130 TNFAIP8O95379 198 aa24.51■■□□□ 1.51
SPTSSA-201ENST00000298130 OR13J1Q8NGT2 312 aa24.51■■□□□ 1.51
SPTSSA-201ENST00000298130 FAM149AA5PLN7 773 aa24.5■■□□□ 1.51
SPTSSA-201ENST00000298130 LTA4HP09960 611 aaKnown RBP24.5■■□□□ 1.51
SPTSSA-201ENST00000298130 PRSS56P0CW18 603 aa24.5■■□□□ 1.51
SPTSSA-201ENST00000298130 CHRM3P20309 590 aa24.5■■□□□ 1.51
SPTSSA-201ENST00000298130 CCR1P32246 355 aa24.5■■□□□ 1.51
SPTSSA-201ENST00000298130 GPR15P49685 360 aa24.5■■□□□ 1.51
SPTSSA-201ENST00000298130 PFKPQ01813 784 aa24.5■■□□□ 1.51
SPTSSA-201ENST00000298130 ARTNQ5T4W7 220 aa24.5■■□□□ 1.51
SPTSSA-201ENST00000298130 KIAA0930Q6ICG6 404 aaPredicted RBP24.5■■□□□ 1.51
SPTSSA-201ENST00000298130 SCD5Q86SK9 330 aa24.5■■□□□ 1.51
SPTSSA-201ENST00000298130 CIR1Q86X95 450 aaPredicted RBP24.5■■□□□ 1.51
SPTSSA-201ENST00000298130 KCNA7Q96RP8 456 aa24.5■■□□□ 1.51
SPTSSA-201ENST00000298130 NOL6Q9H6R4 1146 aaKnown RBP24.5■■□□□ 1.51
SPTSSA-201ENST00000298130 BCAP29Q9UHQ4 241 aa24.5■■□□□ 1.51
SPTSSA-201ENST00000298130 A0A1W2PQH9 124 aa24.5■■□□□ 1.51
SPTSSA-201ENST00000298130 INHBCP55103 352 aa24.5■■□□□ 1.51
SPTSSA-201ENST00000298130 AGAP9Q5VTM2 703 aa24.5■■□□□ 1.51
SPTSSA-201ENST00000298130 CXCL17Q6UXB2 119 aa24.5■■□□□ 1.51
SPTSSA-201ENST00000298130 GTF3C2Q8WUA4 911 aaPredicted RBP24.5■■□□□ 1.51
SPTSSA-201ENST00000298130 DLG3Q92796 817 aa24.5■■□□□ 1.51
SPTSSA-201ENST00000298130 SENP6Q9GZR1 1112 aaPredicted RBP24.5■■□□□ 1.51
SPTSSA-201ENST00000298130 AP5M1Q9H0R1 490 aa24.5■■□□□ 1.51
SPTSSA-201ENST00000298130 CAAP1Q9H8G2 361 aa24.5■■□□□ 1.51
SPTSSA-201ENST00000298130 EGFL7Q9UHF1 273 aa24.5■■□□□ 1.51
SPTSSA-201ENST00000298130 HEATR9A2RTY3 570 aa24.49■■□□□ 1.51
SPTSSA-201ENST00000298130 AP3B1O00203 1094 aa24.49■■□□□ 1.51
SPTSSA-201ENST00000298130 SLC22A2O15244 555 aa24.49■■□□□ 1.51
SPTSSA-201ENST00000298130 HK2P52789 917 aa24.49■■□□□ 1.51
SPTSSA-201ENST00000298130 FOXA1P55317 472 aa24.49■■□□□ 1.51
SPTSSA-201ENST00000298130 HMCESQ96FZ2 354 aa24.49■■□□□ 1.51
SPTSSA-201ENST00000298130 UNC93B1Q9H1C4 597 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms