RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 DPP6P42658 865 aa11.84□□□□□ -0.51
RHO-201ENST00000296271 PSEN1P49768 467 aa11.84□□□□□ -0.51
RHO-201ENST00000296271 CDKN1CP49918 316 aaPredicted RBP11.84□□□□□ -0.51
RHO-201ENST00000296271 NUDT2P50583 147 aa11.84□□□□□ -0.51
RHO-201ENST00000296271 SLC12A2P55011 1212 aa11.84□□□□□ -0.51
RHO-201ENST00000296271 TIAL1Q01085 375 aaKnown RBP eCLIP11.84□□□□□ -0.51
RHO-201ENST00000296271 TBL3Q12788 808 aaKnown RBP11.84□□□□□ -0.51
RHO-201ENST00000296271 LBRQ14739 615 aaKnown RBP11.84□□□□□ -0.51
RHO-201ENST00000296271 DNAL1Q4LDG9 190 aa11.84□□□□□ -0.51
RHO-201ENST00000296271 LPCAT4Q643R3 524 aa11.84□□□□□ -0.51
RHO-201ENST00000296271 CLEC6AQ6EIG7 209 aa11.84□□□□□ -0.51
RHO-201ENST00000296271 C16orf59Q7L2K0 433 aa11.84□□□□□ -0.51
RHO-201ENST00000296271 DEFB128Q7Z7B8 93 aa11.84□□□□□ -0.51
RHO-201ENST00000296271 DENND1CQ8IV53 801 aa11.84□□□□□ -0.51
RHO-201ENST00000296271 SLC26A7Q8TE54 656 aa11.84□□□□□ -0.51
RHO-201ENST00000296271 VN1R3Q9BXE9 311 aa11.84□□□□□ -0.51
RHO-201ENST00000296271 MRPL46Q9H2W6 279 aaKnown RBP11.84□□□□□ -0.51
RHO-201ENST00000296271 TLR8Q9NR97 1041 aaKnown RBP11.84□□□□□ -0.51
RHO-201ENST00000296271 GIMAP2Q9UG22 337 aa11.84□□□□□ -0.51
RHO-201ENST00000296271 RPL26L1Q9UNX3 145 aaKnown RBP11.84□□□□□ -0.51
RHO-201ENST00000296271 ANKRD6Q9Y2G4 727 aa11.84□□□□□ -0.51
RHO-201ENST00000296271 SPO11Q9Y5K1 396 aa11.84□□□□□ -0.51
RHO-201ENST00000296271 ZFP37Q9Y6Q3 630 aaPredicted RBP11.84□□□□□ -0.51
RHO-201ENST00000296271 UNC80Q8N2C7 3258 aa11.84□□□□□ -0.51
RHO-201ENST00000296271 A8MT66 165 aa11.84□□□□□ -0.51
RHO-201ENST00000296271 UBFD1O14562 309 aaKnown RBP11.84□□□□□ -0.51
RHO-201ENST00000296271 CFLARO15519 480 aa11.84□□□□□ -0.51
RHO-201ENST00000296271 SELPP16109 830 aa11.84□□□□□ -0.51
RHO-201ENST00000296271 ATP6V1C1P21283 382 aa11.84□□□□□ -0.51
RHO-201ENST00000296271 OR1D2P34982 312 aa11.84□□□□□ -0.51
RHO-201ENST00000296271 CDH13P55290 713 aa11.84□□□□□ -0.51
RHO-201ENST00000296271 C1QTNF8P60827 252 aa11.84□□□□□ -0.51
RHO-201ENST00000296271 NRG1Q02297 640 aaPredicted RBP11.84□□□□□ -0.51
RHO-201ENST00000296271 GPR17Q13304 367 aa11.84□□□□□ -0.51
RHO-201ENST00000296271 TECRLQ5HYJ1 363 aa11.84□□□□□ -0.51
RHO-201ENST00000296271 FAM156AQ8NDB6 213 aa11.84□□□□□ -0.51
RHO-201ENST00000296271 PTERQ96BW5 349 aa11.84□□□□□ -0.51
RHO-201ENST00000296271 RCN3Q96D15 328 aa11.84□□□□□ -0.51
RHO-201ENST00000296271 SIKE1Q9BRV8 207 aa11.84□□□□□ -0.51
RHO-201ENST00000296271 UBE2OQ9C0C9 1292 aaKnown RBP11.84□□□□□ -0.51
RHO-201ENST00000296271 C1orf21Q9H246 121 aa11.84□□□□□ -0.51
RHO-201ENST00000296271 ARNT2Q9HBZ2 717 aa11.84□□□□□ -0.51
RHO-201ENST00000296271 CREBZFQ9NS37 354 aa11.84□□□□□ -0.51
RHO-201ENST00000296271 POMPQ9Y244 141 aa11.84□□□□□ -0.51
RHO-201ENST00000296271 CCDC189A1A4V9 331 aa11.83□□□□□ -0.52
RHO-201ENST00000296271 CCDC162PA2VCL2 907 aa11.83□□□□□ -0.52
RHO-201ENST00000296271 MROH6A6NGR9 719 aa11.83□□□□□ -0.52
RHO-201ENST00000296271 DRGXA6NNA5 263 aa11.83□□□□□ -0.52
RHO-201ENST00000296271 SLC38A8A6NNN8 435 aa11.83□□□□□ -0.52
RHO-201ENST00000296271 ARVCFO00192 962 aa11.83□□□□□ -0.52
RHO-201ENST00000296271 SYN3O14994 580 aa11.83□□□□□ -0.52
RHO-201ENST00000296271 PQBP1O60828 265 aaKnown RBP11.83□□□□□ -0.52
RHO-201ENST00000296271 SEC24AO95486 1093 aa11.83□□□□□ -0.52
RHO-201ENST00000296271 GOT2P00505 430 aaKnown RBP11.83□□□□□ -0.52
RHO-201ENST00000296271 IGLV3-27P01718 113 aa11.83□□□□□ -0.52
RHO-201ENST00000296271 HOXD9P28356 352 aaPredicted RBP11.83□□□□□ -0.52
RHO-201ENST00000296271 PRAMEP78395 509 aa11.83□□□□□ -0.52
RHO-201ENST00000296271 HTRA3P83110 453 aa11.83□□□□□ -0.52
RHO-201ENST00000296271 SULT2A1Q06520 285 aa11.83□□□□□ -0.52
RHO-201ENST00000296271 TBCCQ15814 346 aa11.83□□□□□ -0.52
RHO-201ENST00000296271 UGP2Q16851 508 aa11.83□□□□□ -0.52
RHO-201ENST00000296271 PGM2L1Q6PCE3 622 aa11.83□□□□□ -0.52
RHO-201ENST00000296271 LINGO4Q6UY18 593 aa11.83□□□□□ -0.52
RHO-201ENST00000296271 ARHGAP24Q8N264 748 aa11.83□□□□□ -0.52
RHO-201ENST00000296271 TEX26Q8N6G2 289 aa11.83□□□□□ -0.52
RHO-201ENST00000296271 MICAL1Q8TDZ2 1067 aa11.83□□□□□ -0.52
RHO-201ENST00000296271 PRICKLE1Q96MT3 831 aaPredicted RBP11.83□□□□□ -0.52
RHO-201ENST00000296271 NPAS2Q99743 824 aa11.83□□□□□ -0.52
RHO-201ENST00000296271 PPP1R12CQ9BZL4 782 aa11.83□□□□□ -0.52
RHO-201ENST00000296271 RNF38Q9H0F5 515 aa11.83□□□□□ -0.52
RHO-201ENST00000296271 STN1Q9H668 368 aaKnown RBP11.83□□□□□ -0.52
RHO-201ENST00000296271 SMPD4Q9NXE4 827 aa11.83□□□□□ -0.52
RHO-201ENST00000296271 NSMCE4AQ9NXX6 385 aa11.83□□□□□ -0.52
RHO-201ENST00000296271 ADAMTS6Q9UKP5 1117 aa11.83□□□□□ -0.52
RHO-201ENST00000296271 SQORQ9Y6N5 450 aa11.83□□□□□ -0.52
RHO-201ENST00000296271 ARHGEF37A1IGU5 675 aa11.83□□□□□ -0.52
RHO-201ENST00000296271 SIX3O95343 332 aaPredicted RBP11.83□□□□□ -0.52
RHO-201ENST00000296271 LMNAP02545 664 aaKnown RBP11.83□□□□□ -0.52
RHO-201ENST00000296271 RPLP2P05387 115 aaKnown RBP11.83□□□□□ -0.52
RHO-201ENST00000296271 SLC2A3P11169 496 aa11.83□□□□□ -0.52
RHO-201ENST00000296271 PAMP19021 973 aa11.83□□□□□ -0.52
RHO-201ENST00000296271 MAGEA11P43364 429 aa11.83□□□□□ -0.52
RHO-201ENST00000296271 LEPRP48357 1165 aaKnown RBP11.83□□□□□ -0.52
RHO-201ENST00000296271 TRMT5Q32P41 509 aaKnown RBP11.83□□□□□ -0.52
RHO-201ENST00000296271 FAM117BQ6P1L5 589 aa11.83□□□□□ -0.52
RHO-201ENST00000296271 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.83□□□□□ -0.52
RHO-201ENST00000296271 MAB21L3Q8N8X9 362 aa11.83□□□□□ -0.52
RHO-201ENST00000296271 SLC43A3Q8NBI5 491 aa11.83□□□□□ -0.52
RHO-201ENST00000296271 CAPNS2Q96L46 248 aa11.83□□□□□ -0.52
RHO-201ENST00000296271 ZNF512Q96ME7 567 aaPredicted RBP11.83□□□□□ -0.52
RHO-201ENST00000296271 DDX50Q9BQ39 737 aaKnown RBP11.83□□□□□ -0.52
RHO-201ENST00000296271 FBRSL1Q9HCM7 1045 aaKnown RBP11.83□□□□□ -0.52
RHO-201ENST00000296271 GALPQ9UBC7 116 aa11.83□□□□□ -0.52
RHO-201ENST00000296271 IKZF3Q9UKT9 509 aa11.83□□□□□ -0.52
RHO-201ENST00000296271 COPG1Q9Y678 874 aaKnown RBP11.83□□□□□ -0.52
RHO-201ENST00000296271 A0A1B0GTL3 188 aa11.82□□□□□ -0.52
RHO-201ENST00000296271 LOC285095A0A1B0GVY8 99 aa11.82□□□□□ -0.52
RHO-201ENST00000296271 AP3B1O00203 1094 aa11.82□□□□□ -0.52
RHO-201ENST00000296271 SDHDO14521 159 aa11.82□□□□□ -0.52
RHO-201ENST00000296271 TBC1D4O60343 1298 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms