RNA–Protein interactions for RNA: ENST00000294785.9

NCSTN-201, Transcript of nicastrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCSTN, Length 2,936 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-201ENST00000294785 MSX2P35548 267 aaPredicted RBP13.76□□□□□ -0.21
NCSTN-201ENST00000294785 CHRNA4P43681 627 aa13.76□□□□□ -0.21
NCSTN-201ENST00000294785 ACADVLP49748 655 aa13.76□□□□□ -0.21
NCSTN-201ENST00000294785 FKBP1BP68106 108 aa13.76□□□□□ -0.21
NCSTN-201ENST00000294785 TSPY1Q01534 308 aa13.76□□□□□ -0.21
NCSTN-201ENST00000294785 REP15Q6BDI9 236 aa13.76□□□□□ -0.21
NCSTN-201ENST00000294785 L3HYPDHQ96EM0 354 aa13.76□□□□□ -0.21
NCSTN-201ENST00000294785 IMP4Q96G21 291 aaKnown RBP13.76□□□□□ -0.21
NCSTN-201ENST00000294785 SERPINB11Q96P15 392 aa13.76□□□□□ -0.21
NCSTN-201ENST00000294785 PAAF1Q9BRP4 392 aa13.76□□□□□ -0.21
NCSTN-201ENST00000294785 NDFIP2Q9NV92 336 aa13.76□□□□□ -0.21
NCSTN-201ENST00000294785 TMLHEQ9NVH6 421 aa13.76□□□□□ -0.21
NCSTN-201ENST00000294785 AP4S1Q9Y587 144 aa13.76□□□□□ -0.21
NCSTN-201ENST00000294785 ANKRD33BA6NCL7 494 aa13.76□□□□□ -0.21
NCSTN-201ENST00000294785 GPR182O15218 404 aa13.76□□□□□ -0.21
NCSTN-201ENST00000294785 GPC4O75487 556 aa13.76□□□□□ -0.21
NCSTN-201ENST00000294785 PGM3O95394 542 aa13.76□□□□□ -0.21
NCSTN-201ENST00000294785 CCDC166P0CW27 439 aa13.76□□□□□ -0.21
NCSTN-201ENST00000294785 IMPDH1P20839 514 aa13.76□□□□□ -0.21
NCSTN-201ENST00000294785 NDST2P52849 883 aa13.76□□□□□ -0.21
NCSTN-201ENST00000294785 SLC5A3P53794 718 aa13.76□□□□□ -0.21
NCSTN-201ENST00000294785 NFKB2Q00653 900 aa13.76□□□□□ -0.21
NCSTN-201ENST00000294785 SCAMP5Q8TAC9 235 aa13.76□□□□□ -0.21
NCSTN-201ENST00000294785 CASP10Q92851 521 aa13.76□□□□□ -0.21
NCSTN-201ENST00000294785 SLC2A11Q9BYW1 496 aa13.76□□□□□ -0.21
NCSTN-201ENST00000294785 SENP6Q9GZR1 1112 aaPredicted RBP13.76□□□□□ -0.21
NCSTN-201ENST00000294785 NEMP2A6NFY4 417 aa13.75□□□□□ -0.21
NCSTN-201ENST00000294785 ZNF623O75123 536 aa13.75□□□□□ -0.21
NCSTN-201ENST00000294785 RNASEH2AO75792 299 aaKnown RBP13.75□□□□□ -0.21
NCSTN-201ENST00000294785 B3GAT3O94766 335 aa13.75□□□□□ -0.21
NCSTN-201ENST00000294785 HOXB8P17481 243 aaPredicted RBP13.75□□□□□ -0.21
NCSTN-201ENST00000294785 YY1P25490 414 aa13.75□□□□□ -0.21
NCSTN-201ENST00000294785 C1QTNF8P60827 252 aa13.75□□□□□ -0.21
NCSTN-201ENST00000294785 HECTD2Q5U5R9 776 aa13.75□□□□□ -0.21
NCSTN-201ENST00000294785 OVOS1Q6IE37 1185 aa13.75□□□□□ -0.21
NCSTN-201ENST00000294785 CILP2Q8IUL8 1156 aa13.75□□□□□ -0.21
NCSTN-201ENST00000294785 UMODL1-AS1Q8N2C9 162 aa13.75□□□□□ -0.21
NCSTN-201ENST00000294785 HMGCLL1Q8TB92 370 aa13.75□□□□□ -0.21
NCSTN-201ENST00000294785 CNBD2Q96M20 576 aa13.75□□□□□ -0.21
NCSTN-201ENST00000294785 UROC1Q96N76 676 aa13.75□□□□□ -0.21
NCSTN-201ENST00000294785 ASB2Q96Q27 587 aa13.75□□□□□ -0.21
NCSTN-201ENST00000294785 ZNF408Q9H9D4 720 aa13.75□□□□□ -0.21
NCSTN-201ENST00000294785 HS3ST4Q9Y661 456 aa13.75□□□□□ -0.21
NCSTN-201ENST00000294785 E7ENX8 843 aa13.75□□□□□ -0.21
NCSTN-201ENST00000294785 TNFRSF10BO14763 440 aa13.75□□□□□ -0.21
NCSTN-201ENST00000294785 AURKAO14965 403 aa13.75□□□□□ -0.21
NCSTN-201ENST00000294785 WISP3O95389 354 aaPredicted RBP13.75□□□□□ -0.21
NCSTN-201ENST00000294785 ZNF26P17031 533 aaPredicted RBP13.75□□□□□ -0.21
NCSTN-201ENST00000294785 MLLT6P55198 1093 aaPredicted RBP13.75□□□□□ -0.21
NCSTN-201ENST00000294785 MYBPC1Q00872 1141 aa13.75□□□□□ -0.21
NCSTN-201ENST00000294785 TNK2Q07912 1038 aa13.75□□□□□ -0.21
NCSTN-201ENST00000294785 SLC5A9Q2M3M2 681 aa13.75□□□□□ -0.21
NCSTN-201ENST00000294785 SAMD4BQ5PRF9 694 aaKnown RBP13.75□□□□□ -0.21
NCSTN-201ENST00000294785 EME1Q96AY2 570 aa13.75□□□□□ -0.21
NCSTN-201ENST00000294785 ROPN1LQ96C74 230 aa13.75□□□□□ -0.21
NCSTN-201ENST00000294785 NDNQ99608 321 aa13.75□□□□□ -0.21
NCSTN-201ENST00000294785 PTPN18Q99952 460 aa13.75□□□□□ -0.21
NCSTN-201ENST00000294785 UNKQ9C0B0 810 aaKnown RBP13.75□□□□□ -0.21
NCSTN-201ENST00000294785 ATXN3LQ9H3M9 355 aa13.75□□□□□ -0.21
NCSTN-201ENST00000294785 MFSD1Q9H3U5 465 aa13.75□□□□□ -0.21
NCSTN-201ENST00000294785 GSTO2Q9H4Y5 243 aa13.75□□□□□ -0.21
NCSTN-201ENST00000294785 SFMBT1Q9UHJ3 866 aa13.75□□□□□ -0.21
NCSTN-201ENST00000294785 VWA7Q9Y334 891 aa13.75□□□□□ -0.21
NCSTN-201ENST00000294785 BPTFQ12830 3046 aa13.74□□□□□ -0.21
NCSTN-201ENST00000294785 BBIP1A8MTZ0 92 aa13.74□□□□□ -0.21
NCSTN-201ENST00000294785 FBP2O00757 339 aa13.74□□□□□ -0.21
NCSTN-201ENST00000294785 PEX11BO96011 259 aa13.74□□□□□ -0.21
NCSTN-201ENST00000294785 SLC2A3P11169 496 aa13.74□□□□□ -0.21
NCSTN-201ENST00000294785 KCNA5P22460 613 aa13.74□□□□□ -0.21
NCSTN-201ENST00000294785 APOFQ13790 326 aa13.74□□□□□ -0.21
NCSTN-201ENST00000294785 AGKQ53H12 422 aa13.74□□□□□ -0.21
NCSTN-201ENST00000294785 IL23RQ5VWK5 629 aa13.74□□□□□ -0.21
NCSTN-201ENST00000294785 C8orf82Q6P1X6 216 aaPredicted RBP13.74□□□□□ -0.21
NCSTN-201ENST00000294785 BORAQ6PGQ7 559 aa13.74□□□□□ -0.21
NCSTN-201ENST00000294785 OR13J1Q8NGT2 312 aa13.74□□□□□ -0.21
NCSTN-201ENST00000294785 OR10T2Q8NGX3 314 aa13.74□□□□□ -0.21
NCSTN-201ENST00000294785 ZNF597Q96LX8 424 aa13.74□□□□□ -0.21
NCSTN-201ENST00000294785 UHRF1Q96T88 793 aaPredicted RBP13.74□□□□□ -0.21
NCSTN-201ENST00000294785 EFHD1Q9BUP0 239 aa13.74□□□□□ -0.21
NCSTN-201ENST00000294785 CYP4F12Q9HCS2 524 aa13.74□□□□□ -0.21
NCSTN-201ENST00000294785 ETAA1Q9NY74 926 aa13.74□□□□□ -0.21
NCSTN-201ENST00000294785 CD300AQ9UGN4 299 aa13.74□□□□□ -0.21
NCSTN-201ENST00000294785 TRAF6Q9Y4K3 522 aa13.74□□□□□ -0.21
NCSTN-201ENST00000294785 DOCK3Q8IZD9 2030 aa13.74□□□□□ -0.21
NCSTN-201ENST00000294785 DOCK4Q8N1I0 1966 aa13.74□□□□□ -0.21
NCSTN-201ENST00000294785 TCRBV3S1A0A5B6 114 aa13.74□□□□□ -0.21
NCSTN-201ENST00000294785 IQCA1LA6NCM1 817 aa13.74□□□□□ -0.21
NCSTN-201ENST00000294785 MROH6A6NGR9 719 aa13.74□□□□□ -0.21
NCSTN-201ENST00000294785 MSI1O43347 362 aaKnown RBP13.74□□□□□ -0.21
NCSTN-201ENST00000294785 SRP72O76094 671 aaKnown RBP13.74□□□□□ -0.21
NCSTN-201ENST00000294785 TYMPP19971 482 aa13.74□□□□□ -0.21
NCSTN-201ENST00000294785 TCN1P20061 433 aaPredicted RBP13.74□□□□□ -0.21
NCSTN-201ENST00000294785 SLC7A1P30825 629 aa13.74□□□□□ -0.21
NCSTN-201ENST00000294785 PCSK7Q16549 785 aa13.74□□□□□ -0.21
NCSTN-201ENST00000294785 MGAT5BQ3V5L5 792 aa13.74□□□□□ -0.21
NCSTN-201ENST00000294785 SPRYD7Q5W111 196 aa13.74□□□□□ -0.21
NCSTN-201ENST00000294785 LRRTM3Q86VH5 581 aa13.74□□□□□ -0.21
NCSTN-201ENST00000294785 SPATA2LQ8IUW3 424 aaPredicted RBP13.74□□□□□ -0.21
NCSTN-201ENST00000294785 PCDH20Q8N6Y1 951 aaKnown RBP13.74□□□□□ -0.21
NCSTN-201ENST00000294785 RSPH1Q8WYR4 309 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms