RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 NXNL1Q96CM4 212 aa15.41■□□□□ 0.06
SHROOM4-201ENST00000289292 ZDHHC6Q9H6R6 413 aa15.41■□□□□ 0.06
SHROOM4-201ENST00000289292 ABCC13Q9NSE7 274 aa15.41■□□□□ 0.06
SHROOM4-201ENST00000289292 DNAJC28Q9NX36 388 aa15.41■□□□□ 0.06
SHROOM4-201ENST00000289292 AZIN1O14977 448 aa15.41■□□□□ 0.06
SHROOM4-201ENST00000289292 CHRNB2P17787 502 aa15.41■□□□□ 0.06
SHROOM4-201ENST00000289292 PAICSP22234 425 aaKnown RBP15.41■□□□□ 0.06
SHROOM4-201ENST00000289292 TTKP33981 857 aa15.41■□□□□ 0.06
SHROOM4-201ENST00000289292 NUP62P37198 522 aaPredicted RBP15.41■□□□□ 0.06
SHROOM4-201ENST00000289292 BNIP2Q12982 314 aa15.41■□□□□ 0.06
SHROOM4-201ENST00000289292 CNPY1Q3B7I2 92 aa15.41■□□□□ 0.06
SHROOM4-201ENST00000289292 EEF1DP3Q658K8 133 aa15.41■□□□□ 0.06
SHROOM4-201ENST00000289292 GPRIN3Q6ZVF9 776 aa15.41■□□□□ 0.06
SHROOM4-201ENST00000289292 HELQQ8TDG4 1101 aa15.41■□□□□ 0.06
SHROOM4-201ENST00000289292 HDAC10Q969S8 669 aa15.41■□□□□ 0.06
SHROOM4-201ENST00000289292 SLC12A4Q9UP95 1085 aa15.41■□□□□ 0.06
SHROOM4-201ENST00000289292 TELO2Q9Y4R8 837 aa15.41■□□□□ 0.06
SHROOM4-201ENST00000289292 NFASCO94856 1347 aa15.41■□□□□ 0.06
SHROOM4-201ENST00000289292 MFSD11O43934 449 aa15.41■□□□□ 0.06
SHROOM4-201ENST00000289292 CDKN2BP42772 138 aa15.41■□□□□ 0.06
SHROOM4-201ENST00000289292 PIK3CGP48736 1102 aa15.41■□□□□ 0.06
SHROOM4-201ENST00000289292 IDH3AP50213 366 aa15.41■□□□□ 0.06
SHROOM4-201ENST00000289292 PTSQ03393 145 aa15.41■□□□□ 0.06
SHROOM4-201ENST00000289292 PLD1Q13393 1074 aa15.41■□□□□ 0.06
SHROOM4-201ENST00000289292 GALNT18Q6P9A2 607 aa15.41■□□□□ 0.06
SHROOM4-201ENST00000289292 PAGE2Q7Z2X7 111 aa15.41■□□□□ 0.06
SHROOM4-201ENST00000289292 LDB1Q86U70 411 aaPredicted RBP15.41■□□□□ 0.06
SHROOM4-201ENST00000289292 MCOLN3Q8TDD5 553 aa15.41■□□□□ 0.06
SHROOM4-201ENST00000289292 TMEM169Q96HH4 297 aa15.41■□□□□ 0.06
SHROOM4-201ENST00000289292 CITED4Q96RK1 184 aa15.41■□□□□ 0.06
SHROOM4-201ENST00000289292 MKL2Q9ULH7 1088 aa15.41■□□□□ 0.06
SHROOM4-201ENST00000289292 RPL26L1Q9UNX3 145 aaKnown RBP15.41■□□□□ 0.06
SHROOM4-201ENST00000289292 RECQL5O94762 991 aaPredicted RBP15.4■□□□□ 0.06
SHROOM4-201ENST00000289292 CST3P01034 146 aaPredicted RBP15.4■□□□□ 0.06
SHROOM4-201ENST00000289292 CTPS1P17812 591 aa15.4■□□□□ 0.06
SHROOM4-201ENST00000289292 MTHFRP42898 656 aa15.4■□□□□ 0.06
SHROOM4-201ENST00000289292 BCL2L1Q07817 233 aa15.4■□□□□ 0.06
SHROOM4-201ENST00000289292 HSPA14Q0VDF9 509 aa15.4■□□□□ 0.06
SHROOM4-201ENST00000289292 DCAF12L1Q5VU92 463 aa15.4■□□□□ 0.06
SHROOM4-201ENST00000289292 FAM43BQ6ZT52 329 aaPredicted RBP15.4■□□□□ 0.06
SHROOM4-201ENST00000289292 DEFB128Q7Z7B8 93 aa15.4■□□□□ 0.06
SHROOM4-201ENST00000289292 KLHL5Q96PQ7 755 aa15.4■□□□□ 0.06
SHROOM4-201ENST00000289292 BCAS3Q9H6U6 928 aa15.4■□□□□ 0.06
SHROOM4-201ENST00000289292 KLHL12Q53G59 568 aa15.4■□□□□ 0.06
SHROOM4-201ENST00000289292 PITRM1Q5JRX3 1037 aa15.4■□□□□ 0.06
SHROOM4-201ENST00000289292 CELF3Q5SZQ8 465 aaKnown RBP15.4■□□□□ 0.06
SHROOM4-201ENST00000289292 RNF180Q86T96 592 aa15.4■□□□□ 0.06
SHROOM4-201ENST00000289292 ELOVL4Q9GZR5 314 aa15.4■□□□□ 0.06
SHROOM4-201ENST00000289292 SLC17A6Q9P2U8 582 aa15.4■□□□□ 0.06
SHROOM4-201ENST00000289292 ITGB1BP2Q9UKP3 347 aa15.4■□□□□ 0.06
SHROOM4-201ENST00000289292 TRAF6Q9Y4K3 522 aa15.4■□□□□ 0.06
SHROOM4-201ENST00000289292 SLC26A3P40879 764 aa15.4■□□□□ 0.06
SHROOM4-201ENST00000289292 DPYSQ14117 519 aa15.4■□□□□ 0.06
SHROOM4-201ENST00000289292 TIGD2Q4W5G0 525 aa15.4■□□□□ 0.06
SHROOM4-201ENST00000289292 MACC1Q6ZN28 852 aa15.4■□□□□ 0.06
SHROOM4-201ENST00000289292 MTSS1LQ765P7 747 aa15.4■□□□□ 0.06
SHROOM4-201ENST00000289292 RDH11Q8TC12 318 aa15.4■□□□□ 0.06
SHROOM4-201ENST00000289292 LPGAT1Q92604 370 aa15.4■□□□□ 0.06
SHROOM4-201ENST00000289292 MYLPFQ96A32 169 aa15.4■□□□□ 0.06
SHROOM4-201ENST00000289292 BBS4Q96RK4 519 aa15.4■□□□□ 0.06
SHROOM4-201ENST00000289292 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.4■□□□□ 0.06
SHROOM4-201ENST00000289292 COL5A2P05997 1499 aaPredicted RBP15.4■□□□□ 0.06
SHROOM4-201ENST00000289292 ABLIM1O14639 778 aa15.4■□□□□ 0.06
SHROOM4-201ENST00000289292 TFECO14948 347 aaPredicted RBP15.4■□□□□ 0.06
SHROOM4-201ENST00000289292 EIF2S1P05198 315 aaKnown RBP15.4■□□□□ 0.06
SHROOM4-201ENST00000289292 PTPRAP18433 802 aa15.4■□□□□ 0.06
SHROOM4-201ENST00000289292 STX4Q12846 297 aa15.4■□□□□ 0.06
SHROOM4-201ENST00000289292 MED22Q15528 200 aa15.4■□□□□ 0.06
SHROOM4-201ENST00000289292 VPS26BQ4G0F5 336 aa15.4■□□□□ 0.06
SHROOM4-201ENST00000289292 ZCCHC8Q6NZY4 707 aaKnown RBP15.4■□□□□ 0.06
SHROOM4-201ENST00000289292 CNSTQ6PJW8 725 aa15.4■□□□□ 0.06
SHROOM4-201ENST00000289292 SAMHD1Q9Y3Z3 626 aaKnown RBP15.4■□□□□ 0.06
SHROOM4-201ENST00000289292 ZNF536O15090 1300 aa15.4■□□□□ 0.06
SHROOM4-201ENST00000289292 MAFO75444 373 aaPredicted RBP15.4■□□□□ 0.06
SHROOM4-201ENST00000289292 TRMUO75648 421 aaKnown RBP15.4■□□□□ 0.06
SHROOM4-201ENST00000289292 SEPHS1P49903 392 aa15.4■□□□□ 0.06
SHROOM4-201ENST00000289292 MPP1Q00013 466 aa15.4■□□□□ 0.06
SHROOM4-201ENST00000289292 PTPRNQ16849 979 aa15.4■□□□□ 0.06
SHROOM4-201ENST00000289292 PNPT1Q8TCS8 783 aaKnown RBP15.4■□□□□ 0.06
SHROOM4-201ENST00000289292 C3orf18Q9UK00 162 aa15.4■□□□□ 0.06
SHROOM4-201ENST00000289292 ADM5C9JUS6 153 aa15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 PDHXO00330 501 aa15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 ZBTB14O43829 449 aa15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 TSPAN9O75954 239 aa15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 DGKAP23743 735 aa15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 ACSM2AQ08AH3 577 aa15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 ARMC12Q5T9G4 340 aa15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 RNASEH2BQ5TBB1 312 aaKnown RBP15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 ACSM2BQ68CK6 577 aa15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 ZDHHC24Q6UX98 284 aa15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 VSIG10LQ86VR7 867 aa15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 LINGO1Q96FE5 620 aa15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 ASB8Q9H765 288 aa15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 RASSF1Q9NS23 344 aa15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 PCP4L1A6NKN8 68 aa15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 CDC42P60953 191 aa15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 GBE1Q04446 702 aa15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 CYP20A1Q6UW02 462 aa15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 SEMA3CQ99985 751 aa15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 CLN6Q9NWW5 311 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms