RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 TRIM48Q8IWZ4 208 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 ZFYVE19Q96K21 471 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 FMO2Q99518 471 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 OSBPL1AQ9BXW6 950 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 ELOVL2Q9NXB9 296 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 SNAP91O60641 907 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 ZNF821O75541 412 aaPredicted RBP8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 H2AFXP16104 143 aaPredicted RBP8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 GLDCP23378 1020 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 ARL4CP56559 192 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 VSNL1P62760 191 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 ASPHQ12797 758 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 ARHGEF7Q14155 803 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 MMEL1Q495T6 779 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 CARD16Q5EG05 197 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 TMEM215Q68D42 235 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 UBALD2Q8IYN6 164 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 SYNPOQ8N3V7 929 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 FRS2Q8WU20 508 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 ANKRD7Q92527 254 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 FUT8Q9BYC5 575 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 PLK2Q9NYY3 685 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 TCF20Q9UGU0 1960 aaKnown RBP8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 LOC285095A0A1B0GVY8 99 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 WDR91A4D1P6 747 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 RGS16O15492 202 aaPredicted RBP8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 KAT7O95251 611 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 PPARGP37231 505 aaPredicted RBP8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 SLCO1A2P46721 670 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 SLC6A11P48066 632 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 NPY2RP49146 381 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 SUOXP51687 545 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 PCSK7Q16549 785 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 FBXO43Q4G163 708 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 TRIM67Q6ZTA4 783 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 FRA10AC1Q70Z53 315 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 CCDC33Q8N5R6 958 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 OR2AP1Q8NGE2 309 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 MCUR1Q96AQ8 359 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 MYO19Q96H55 970 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 ZNF641Q96N77 438 aaPredicted RBP8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 TRIB3Q96RU7 358 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 RIMKLBQ9ULI2 386 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 SVILO95425 2214 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 TXNDC9O14530 226 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 LZTS3O60299 673 aaPredicted RBP8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 PCDH8O95206 1070 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 SERPINF2P08697 491 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 IL9P15248 144 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 HLA-DPA1P20036 260 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 RFX3P48380 749 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 PRPF39Q86UA1 669 aaKnown RBP8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 RAVER1Q8IY67 606 aaKnown RBP8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 CFAP36Q96G28 342 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 DCUN1D1Q96GG9 259 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 IER2Q9BTL4 223 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 RPP25Q9BUL9 199 aaKnown RBP8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 TMEM245Q9H330 911 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 GTSE1Q9NYZ3 720 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 LIMD1Q9UGP4 676 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 SUN2Q9UH99 717 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 SORCS3Q9UPU3 1222 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 CTHP32929 405 aa8.49□□□□□ -1.05
PTPDC1-201ENST00000288976 CARSP49589 748 aaKnown RBP8.49□□□□□ -1.05
PTPDC1-201ENST00000288976 CDH17Q12864 832 aa8.49□□□□□ -1.05
PTPDC1-201ENST00000288976 CENPUQ71F23 418 aa8.49□□□□□ -1.05
PTPDC1-201ENST00000288976 TRMT10CQ7L0Y3 403 aaKnown RBP8.49□□□□□ -1.05
PTPDC1-201ENST00000288976 RAB44Q7Z6P3 723 aaPredicted RBP8.49□□□□□ -1.05
PTPDC1-201ENST00000288976 TMIEQ8NEW7 156 aa8.49□□□□□ -1.05
PTPDC1-201ENST00000288976 PEX13Q92968 403 aa8.49□□□□□ -1.05
PTPDC1-201ENST00000288976 OXNAD1Q96HP4 312 aaPredicted RBP8.49□□□□□ -1.05
PTPDC1-201ENST00000288976 MRGPRX2Q96LB1 330 aa8.49□□□□□ -1.05
PTPDC1-201ENST00000288976 NUF2Q9BZD4 464 aa8.49□□□□□ -1.05
PTPDC1-201ENST00000288976 RAD18Q9NS91 495 aa8.49□□□□□ -1.05
PTPDC1-201ENST00000288976 MAGEB16A2A368 324 aa8.49□□□□□ -1.05
PTPDC1-201ENST00000288976 MUSKO15146 869 aa8.49□□□□□ -1.05
PTPDC1-201ENST00000288976 SPAG6O75602 509 aa8.49□□□□□ -1.05
PTPDC1-201ENST00000288976 FGF1P05230 155 aa8.49□□□□□ -1.05
PTPDC1-201ENST00000288976 ABHD2P08910 425 aa8.49□□□□□ -1.05
PTPDC1-201ENST00000288976 ACADMP11310 421 aa8.49□□□□□ -1.05
PTPDC1-201ENST00000288976 MRPS21P82921 87 aaKnown RBP8.49□□□□□ -1.05
PTPDC1-201ENST00000288976 KDSRQ06136 332 aa8.49□□□□□ -1.05
PTPDC1-201ENST00000288976 NIPAL4Q0D2K0 466 aa8.49□□□□□ -1.05
PTPDC1-201ENST00000288976 HIF1AQ16665 826 aa8.49□□□□□ -1.05
PTPDC1-201ENST00000288976 ZNF534Q76KX8 674 aa8.49□□□□□ -1.05
PTPDC1-201ENST00000288976 C11orf96Q7Z7L8 435 aa8.49□□□□□ -1.05
PTPDC1-201ENST00000288976 NETO2Q8NC67 525 aa8.49□□□□□ -1.05
PTPDC1-201ENST00000288976 GABRG3Q99928 467 aa8.49□□□□□ -1.05
PTPDC1-201ENST00000288976 TDRD1Q9BXT4 1180 aaKnown RBP8.49□□□□□ -1.05
PTPDC1-201ENST00000288976 ATP13A3Q9H7F0 1226 aa8.49□□□□□ -1.05
PTPDC1-201ENST00000288976 DKK3Q9UBP4 350 aa8.49□□□□□ -1.05
PTPDC1-201ENST00000288976 WNT16Q9UBV4 365 aa8.49□□□□□ -1.05
PTPDC1-201ENST00000288976 NFU1Q9UMS0 254 aa8.49□□□□□ -1.05
PTPDC1-201ENST00000288976 PLA2G4CQ9UP65 541 aa8.49□□□□□ -1.05
PTPDC1-201ENST00000288976 PIAS3Q9Y6X2 628 aa8.49□□□□□ -1.05
PTPDC1-201ENST00000288976 HTRA2O43464 458 aaPredicted RBP8.49□□□□□ -1.05
PTPDC1-201ENST00000288976 FZD6O60353 706 aa8.49□□□□□ -1.05
PTPDC1-201ENST00000288976 TMEM63AO94886 807 aa8.49□□□□□ -1.05
PTPDC1-201ENST00000288976 POP4O95707 220 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms