RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 CTNNA1P35221 906 aaKnown RBP25.32■■□□□ 1.64
PDF-201ENST00000288022 GCNT7Q6ZNI0 430 aa25.32■■□□□ 1.64
PDF-201ENST00000288022 PTAR1Q7Z6K3 402 aaPredicted RBP25.32■■□□□ 1.64
PDF-201ENST00000288022 CCDC112Q8NEF3 446 aa25.32■■□□□ 1.64
PDF-201ENST00000288022 SETD7Q8WTS6 366 aaKnown RBP25.32■■□□□ 1.64
PDF-201ENST00000288022 ASB12Q8WXK4 309 aa25.32■■□□□ 1.64
PDF-201ENST00000288022 C1QTNF7Q9BXJ2 289 aa25.32■■□□□ 1.64
PDF-201ENST00000288022 GRPEL1Q9HAV7 217 aa25.32■■□□□ 1.64
PDF-201ENST00000288022 SEPT10Q9P0V9 454 aa25.32■■□□□ 1.64
PDF-201ENST00000288022 AMACRQ9UHK6 382 aa25.32■■□□□ 1.64
PDF-201ENST00000288022 PCDHB9Q9Y5E1 797 aa25.32■■□□□ 1.64
PDF-201ENST00000288022 PCDHA3Q9Y5H8 950 aa25.32■■□□□ 1.64
PDF-201ENST00000288022 HS3ST3A1Q9Y663 406 aa25.32■■□□□ 1.64
PDF-201ENST00000288022 hCG_1818297A0A087WSY0 165 aa25.31■■□□□ 1.64
PDF-201ENST00000288022 A0A1W2PQ67 120 aa25.31■■□□□ 1.64
PDF-201ENST00000288022 CCDC66A2RUB6 948 aa25.31■■□□□ 1.64
PDF-201ENST00000288022 GOLGA6L3A6NEY3 463 aa25.31■■□□□ 1.64
PDF-201ENST00000288022 FPGTO14772 594 aa25.31■■□□□ 1.64
PDF-201ENST00000288022 SH3BP5O60239 455 aa25.31■■□□□ 1.64
PDF-201ENST00000288022 CPP00450 1065 aa25.31■■□□□ 1.64
PDF-201ENST00000288022 JCHAINP01591 159 aa25.31■■□□□ 1.64
PDF-201ENST00000288022 HLA-DQB2P05538 268 aa25.31■■□□□ 1.64
PDF-201ENST00000288022 MMP12P39900 470 aa25.31■■□□□ 1.64
PDF-201ENST00000288022 DSC2Q02487 901 aa25.31■■□□□ 1.64
PDF-201ENST00000288022 TRAF2Q12933 501 aa25.31■■□□□ 1.64
PDF-201ENST00000288022 SUZ12Q15022 739 aaKnown RBP25.31■■□□□ 1.64
PDF-201ENST00000288022 BZW1Q7L1Q6 419 aaKnown RBP25.31■■□□□ 1.64
PDF-201ENST00000288022 PIP4P1Q86T03 277 aa25.31■■□□□ 1.64
PDF-201ENST00000288022 SPATS2Q86XZ4 545 aaKnown RBP25.31■■□□□ 1.64
PDF-201ENST00000288022 NAXDQ8IW45 347 aa25.31■■□□□ 1.64
PDF-201ENST00000288022 SYCE1Q8N0S2 351 aa25.31■■□□□ 1.64
PDF-201ENST00000288022 LRRC57Q8N9N7 239 aa25.31■■□□□ 1.64
PDF-201ENST00000288022 OR13H1Q8NG92 308 aa25.31■■□□□ 1.64
PDF-201ENST00000288022 OLFM3Q96PB7 478 aa25.31■■□□□ 1.64
PDF-201ENST00000288022 LENG8Q96PV6 779 aaPredicted RBP25.31■■□□□ 1.64
PDF-201ENST00000288022 SAE1Q9UBE0 346 aaPredicted RBP25.31■■□□□ 1.64
PDF-201ENST00000288022 COQ6Q9Y2Z9 468 aa25.31■■□□□ 1.64
PDF-201ENST00000288022 A0A1B0GTQ1 180 aa25.3■■□□□ 1.64
PDF-201ENST00000288022 GIPC1O14908 333 aa25.3■■□□□ 1.64
PDF-201ENST00000288022 ARHGAP6O43182 974 aa25.3■■□□□ 1.64
PDF-201ENST00000288022 HTRA2O43464 458 aaPredicted RBP25.3■■□□□ 1.64
PDF-201ENST00000288022 CEACAM1P13688 526 aa25.3■■□□□ 1.64
PDF-201ENST00000288022 TGM2P21980 687 aa25.3■■□□□ 1.64
PDF-201ENST00000288022 NR2C2P49116 596 aa25.3■■□□□ 1.64
PDF-201ENST00000288022 ARRB1P49407 418 aaPredicted RBP25.3■■□□□ 1.64
PDF-201ENST00000288022 LIG3P49916 1009 aa25.3■■□□□ 1.64
PDF-201ENST00000288022 Q6ZSR6 202 aa25.3■■□□□ 1.64
PDF-201ENST00000288022 B4GALNT4Q76KP1 1039 aa25.3■■□□□ 1.64
PDF-201ENST00000288022 PEX26Q7Z412 305 aa25.3■■□□□ 1.64
PDF-201ENST00000288022 ABI3BPQ7Z7G0 1075 aa25.3■■□□□ 1.64
PDF-201ENST00000288022 FAM174AQ8TBP5 190 aa25.3■■□□□ 1.64
PDF-201ENST00000288022 P3H4Q92791 437 aa25.3■■□□□ 1.64
PDF-201ENST00000288022 CAMK1GQ96NX5 476 aa25.3■■□□□ 1.64
PDF-201ENST00000288022 KLF6Q99612 283 aaPredicted RBP25.3■■□□□ 1.64
PDF-201ENST00000288022 BRD8Q9H0E9 1235 aa25.3■■□□□ 1.64
PDF-201ENST00000288022 AMFRQ9UKV5 643 aa25.3■■□□□ 1.64
PDF-201ENST00000288022 PCDHGB2Q9Y5G2 931 aa25.3■■□□□ 1.64
PDF-201ENST00000288022 RAI2Q9Y5P3 530 aa25.3■■□□□ 1.64
PDF-201ENST00000288022 ADGRG1Q9Y653 693 aa25.3■■□□□ 1.64
PDF-201ENST00000288022 POM121BA6NF01 834 aa25.29■■□□□ 1.64
PDF-201ENST00000288022 A8MX80 341 aa25.29■■□□□ 1.64
PDF-201ENST00000288022 LZTS3O60299 673 aaPredicted RBP25.29■■□□□ 1.64
PDF-201ENST00000288022 C6P13671 934 aa25.29■■□□□ 1.64
PDF-201ENST00000288022 PECAM1P16284 738 aaPredicted RBP25.29■■□□□ 1.64
PDF-201ENST00000288022 CES1P23141 567 aa25.29■■□□□ 1.64
PDF-201ENST00000288022 NFKBIAP25963 317 aa25.29■■□□□ 1.64
PDF-201ENST00000288022 CTNNA2P26232 953 aa25.29■■□□□ 1.64
PDF-201ENST00000288022 RWDD2BP57060 319 aa25.29■■□□□ 1.64
PDF-201ENST00000288022 IFI35P80217 286 aaPredicted RBP25.29■■□□□ 1.64
PDF-201ENST00000288022 ARMC12Q5T9G4 340 aa25.29■■□□□ 1.64
PDF-201ENST00000288022 CCDC181Q5TID7 509 aa25.29■■□□□ 1.64
PDF-201ENST00000288022 KYAT3Q6YP21 454 aaKnown RBP25.29■■□□□ 1.64
PDF-201ENST00000288022 OXR1Q8N573 874 aa25.29■■□□□ 1.64
PDF-201ENST00000288022 DENND6BQ8NEG7 585 aa25.29■■□□□ 1.64
PDF-201ENST00000288022 HAUS1Q96CS2 278 aa25.29■■□□□ 1.64
PDF-201ENST00000288022 BMFQ96LC9 184 aa25.29■■□□□ 1.64
PDF-201ENST00000288022 HEMGNQ9BXL5 484 aa25.29■■□□□ 1.64
PDF-201ENST00000288022 ERVMER34-1Q9H9K5 563 aa25.29■■□□□ 1.64
PDF-201ENST00000288022 ASCC3Q8N3C0 2202 aaKnown RBP25.29■■□□□ 1.64
PDF-201ENST00000288022 FLRT2O43155 660 aa25.28■■□□□ 1.64
PDF-201ENST00000288022 COPS2P61201 443 aa25.28■■□□□ 1.64
PDF-201ENST00000288022 ADCY2Q08462 1091 aa25.28■■□□□ 1.64
PDF-201ENST00000288022 ZBTB17Q13105 803 aa25.28■■□□□ 1.64
PDF-201ENST00000288022 PPP2R5EQ16537 467 aa25.28■■□□□ 1.64
PDF-201ENST00000288022 ALG1LQ6GMV1 187 aa25.28■■□□□ 1.64
PDF-201ENST00000288022 DPPA4Q7L190 304 aa25.28■■□□□ 1.64
PDF-201ENST00000288022 NT5DC3Q86UY8 548 aa25.28■■□□□ 1.64
PDF-201ENST00000288022 LRRC8AQ8IWT6 810 aa25.28■■□□□ 1.64
PDF-201ENST00000288022 IL12RB2Q99665 862 aa25.28■■□□□ 1.64
PDF-201ENST00000288022 CEP41Q9BYV8 373 aa25.28■■□□□ 1.64
PDF-201ENST00000288022 TSGA10Q9BZW7 698 aa25.28■■□□□ 1.64
PDF-201ENST00000288022 PHTF1Q9UMS5 762 aa25.28■■□□□ 1.64
PDF-201ENST00000288022 DCHS1Q96JQ0 3298 aa25.27■■□□□ 1.64
PDF-201ENST00000288022 MED19A0JLT2 244 aaPredicted RBP25.27■■□□□ 1.64
PDF-201ENST00000288022 YKT6O15498 198 aa25.27■■□□□ 1.64
PDF-201ENST00000288022 NRDCO43847 1150 aa25.27■■□□□ 1.64
PDF-201ENST00000288022 PGLSO95336 258 aa25.27■■□□□ 1.64
PDF-201ENST00000288022 ELFN1P0C7U0 828 aa25.27■■□□□ 1.64
PDF-201ENST00000288022 CA4P22748 312 aa25.27■■□□□ 1.64
PDF-201ENST00000288022 CETN2P41208 172 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms