RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 TRHDEQ9UKU6 1024 aa13.48□□□□□ -0.25
SCAF4-201ENST00000286835 ZNFX1Q9P2E3 1918 aaKnown RBP13.48□□□□□ -0.25
SCAF4-201ENST00000286835 A0A0G2JLL6 359 aaPredicted RBP13.47□□□□□ -0.25
SCAF4-201ENST00000286835 A0A0J9YYE9 177 aa13.47□□□□□ -0.25
SCAF4-201ENST00000286835 A0A1W2PPW3 197 aa13.47□□□□□ -0.25
SCAF4-201ENST00000286835 C22orf31O95567 290 aa13.47□□□□□ -0.25
SCAF4-201ENST00000286835 GSRP00390 522 aa13.47□□□□□ -0.25
SCAF4-201ENST00000286835 GLDCP23378 1020 aa13.47□□□□□ -0.25
SCAF4-201ENST00000286835 HADHAP40939 763 aa13.47□□□□□ -0.25
SCAF4-201ENST00000286835 CDC42EP1Q00587 391 aa13.47□□□□□ -0.25
SCAF4-201ENST00000286835 GHRHRQ02643 423 aa13.47□□□□□ -0.25
SCAF4-201ENST00000286835 BNIP3Q12983 259 aa13.47□□□□□ -0.25
SCAF4-201ENST00000286835 DCAF4L1Q3SXM0 396 aa13.47□□□□□ -0.25
SCAF4-201ENST00000286835 PRRT2Q7Z6L0 340 aaPredicted RBP13.47□□□□□ -0.25
SCAF4-201ENST00000286835 STK32CQ86UX6 486 aa13.47□□□□□ -0.25
SCAF4-201ENST00000286835 TXNDC5Q8NBS9 432 aaKnown RBP13.47□□□□□ -0.25
SCAF4-201ENST00000286835 ZBED2Q9BTP6 218 aa13.47□□□□□ -0.25
SCAF4-201ENST00000286835 IGSF9Q9P2J2 1179 aa13.47□□□□□ -0.25
SCAF4-201ENST00000286835 PRKAG2Q9UGJ0 569 aa13.47□□□□□ -0.25
SCAF4-201ENST00000286835 FADS3Q9Y5Q0 445 aa13.47□□□□□ -0.25
SCAF4-201ENST00000286835 SNX5Q9Y5X3 404 aa13.47□□□□□ -0.25
SCAF4-201ENST00000286835 C7orf72A4D263 438 aa13.47□□□□□ -0.25
SCAF4-201ENST00000286835 NCAM2O15394 837 aa13.47□□□□□ -0.25
SCAF4-201ENST00000286835 KDM1AO60341 852 aa13.47□□□□□ -0.25
SCAF4-201ENST00000286835 CCR1P32246 355 aa13.47□□□□□ -0.25
SCAF4-201ENST00000286835 SLC1A2P43004 574 aa13.47□□□□□ -0.25
SCAF4-201ENST00000286835 RBM20Q5T481 1227 aaKnown RBP13.47□□□□□ -0.25
SCAF4-201ENST00000286835 SPRYD7Q5W111 196 aa13.47□□□□□ -0.25
SCAF4-201ENST00000286835 FBXL20Q96IG2 436 aa13.47□□□□□ -0.25
SCAF4-201ENST00000286835 FAR2Q96K12 515 aa13.47□□□□□ -0.25
SCAF4-201ENST00000286835 C12orf42Q96LP6 360 aa13.47□□□□□ -0.25
SCAF4-201ENST00000286835 KCTD14Q9BQ13 255 aaPredicted RBP13.47□□□□□ -0.25
SCAF4-201ENST00000286835 SLC8A2Q9UPR5 921 aa13.47□□□□□ -0.25
SCAF4-201ENST00000286835 COL24A1Q17RW2 1714 aa13.47□□□□□ -0.25
SCAF4-201ENST00000286835 PRORSD1PA6NEY8 169 aa13.47□□□□□ -0.25
SCAF4-201ENST00000286835 LRIG2O94898 1065 aa13.47□□□□□ -0.25
SCAF4-201ENST00000286835 BCL10O95999 233 aa13.47□□□□□ -0.25
SCAF4-201ENST00000286835 HGFP14210 728 aa13.47□□□□□ -0.25
SCAF4-201ENST00000286835 AKR1A1P14550 325 aa13.47□□□□□ -0.25
SCAF4-201ENST00000286835 DPP6P42658 865 aa13.47□□□□□ -0.25
SCAF4-201ENST00000286835 LSM3P62310 102 aaKnown RBP13.47□□□□□ -0.25
SCAF4-201ENST00000286835 GPR158Q5T848 1215 aa13.47□□□□□ -0.25
SCAF4-201ENST00000286835 TMEM26Q6ZUK4 368 aa13.47□□□□□ -0.25
SCAF4-201ENST00000286835 FAM35AQ86V20 835 aa13.47□□□□□ -0.25
SCAF4-201ENST00000286835 CEP97Q8IW35 865 aa13.47□□□□□ -0.25
SCAF4-201ENST00000286835 BRI3BPQ8WY22 251 aa13.47□□□□□ -0.25
SCAF4-201ENST00000286835 LZICQ8WZA0 190 aa13.47□□□□□ -0.25
SCAF4-201ENST00000286835 C12orf43Q96C57 262 aaKnown RBP13.47□□□□□ -0.25
SCAF4-201ENST00000286835 TSPAN17Q96FV3 270 aa13.47□□□□□ -0.25
SCAF4-201ENST00000286835 C1orf50Q9BV19 199 aa13.47□□□□□ -0.25
SCAF4-201ENST00000286835 NRP1O14786 923 aa13.46□□□□□ -0.25
SCAF4-201ENST00000286835 SPTLC1O15269 473 aa13.46□□□□□ -0.25
SCAF4-201ENST00000286835 ZNF189O75820 626 aaPredicted RBP13.46□□□□□ -0.25
SCAF4-201ENST00000286835 BEST1O76090 585 aa13.46□□□□□ -0.25
SCAF4-201ENST00000286835 RBP1P09455 135 aa13.46□□□□□ -0.25
SCAF4-201ENST00000286835 ATP6V1B2P21281 511 aa13.46□□□□□ -0.25
SCAF4-201ENST00000286835 GLUD2P49448 558 aa13.46□□□□□ -0.25
SCAF4-201ENST00000286835 DPYSQ14117 519 aa13.46□□□□□ -0.25
SCAF4-201ENST00000286835 MFSD10Q14728 455 aa13.46□□□□□ -0.25
SCAF4-201ENST00000286835 MAPK11Q15759 364 aa13.46□□□□□ -0.25
SCAF4-201ENST00000286835 CCDC81Q6ZN84 652 aa13.46□□□□□ -0.25
SCAF4-201ENST00000286835 ERI1Q8IV48 349 aaKnown RBP13.46□□□□□ -0.25
SCAF4-201ENST00000286835 OR2T34Q8NGX1 318 aa13.46□□□□□ -0.25
SCAF4-201ENST00000286835 OR2T3Q8NH03 318 aa13.46□□□□□ -0.25
SCAF4-201ENST00000286835 ADI1Q9BV57 179 aa13.46□□□□□ -0.25
SCAF4-201ENST00000286835 OSBPL6Q9BZF3 934 aa13.46□□□□□ -0.25
SCAF4-201ENST00000286835 GBA3Q9H227 469 aa13.46□□□□□ -0.25
SCAF4-201ENST00000286835 EIF2B3Q9NR50 452 aaKnown RBP13.46□□□□□ -0.25
SCAF4-201ENST00000286835 OAZ3Q9UMX2 235 aa13.46□□□□□ -0.25
SCAF4-201ENST00000286835 HTRA2O43464 458 aaPredicted RBP13.46□□□□□ -0.25
SCAF4-201ENST00000286835 ZBTB11O95625 1053 aaPredicted RBP13.46□□□□□ -0.25
SCAF4-201ENST00000286835 PENKP01210 267 aaPredicted RBP13.46□□□□□ -0.25
SCAF4-201ENST00000286835 CHRM3P20309 590 aa13.46□□□□□ -0.25
SCAF4-201ENST00000286835 TKTP29401 623 aaKnown RBP13.46□□□□□ -0.25
SCAF4-201ENST00000286835 MAGEA3P43357 314 aa13.46□□□□□ -0.25
SCAF4-201ENST00000286835 PRKAA2P54646 552 aa13.46□□□□□ -0.25
SCAF4-201ENST00000286835 RHDQ02161 417 aa13.46□□□□□ -0.25
SCAF4-201ENST00000286835 GRM2Q14416 872 aa13.46□□□□□ -0.25
SCAF4-201ENST00000286835 IQSEC1Q6DN90 963 aa13.46□□□□□ -0.25
SCAF4-201ENST00000286835 PKN3Q6P5Z2 889 aa13.46□□□□□ -0.25
SCAF4-201ENST00000286835 DNAJC14Q6Y2X3 702 aaPredicted RBP13.46□□□□□ -0.25
SCAF4-201ENST00000286835 CHSY3Q70JA7 882 aa13.46□□□□□ -0.25
SCAF4-201ENST00000286835 PTGR2Q8N8N7 351 aaPredicted RBP13.46□□□□□ -0.25
SCAF4-201ENST00000286835 TNIP2Q8NFZ5 429 aa13.46□□□□□ -0.25
SCAF4-201ENST00000286835 RDH11Q8TC12 318 aa13.46□□□□□ -0.25
SCAF4-201ENST00000286835 CACNA2D2Q9NY47 1150 aa13.46□□□□□ -0.25
SCAF4-201ENST00000286835 MPP6Q9NZW5 540 aa13.46□□□□□ -0.25
SCAF4-201ENST00000286835 FAM50BQ9Y247 325 aa13.46□□□□□ -0.25
SCAF4-201ENST00000286835 MTF2Q9Y483 593 aaPredicted RBP13.46□□□□□ -0.25
SCAF4-201ENST00000286835 DGKBQ9Y6T7 804 aa13.46□□□□□ -0.25
SCAF4-201ENST00000286835 CASTOR2A6NHX0 329 aa13.46□□□□□ -0.25
SCAF4-201ENST00000286835 LTA4HP09960 611 aaKnown RBP13.46□□□□□ -0.25
SCAF4-201ENST00000286835 GEMP55040 296 aa13.46□□□□□ -0.25
SCAF4-201ENST00000286835 TSPY1Q01534 308 aa13.46□□□□□ -0.25
SCAF4-201ENST00000286835 MAP2K5Q13163 448 aa13.46□□□□□ -0.25
SCAF4-201ENST00000286835 NR1D2Q14995 579 aa13.46□□□□□ -0.25
SCAF4-201ENST00000286835 ZFP42Q96MM3 310 aa13.46□□□□□ -0.25
SCAF4-201ENST00000286835 ARMC7Q9H6L4 198 aa13.46□□□□□ -0.25
SCAF4-201ENST00000286835 ZNF696Q9H7X3 374 aa13.46□□□□□ -0.25
SCAF4-201ENST00000286835 PTGDR2Q9Y5Y4 395 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms