RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 CEP295NLQ96MC4 621 aa4.71□□□□□ -1.66
CD44-202ENST00000278385 ADOQ96SZ5 270 aa4.71□□□□□ -1.66
CD44-202ENST00000278385 PKP4Q99569 1192 aa4.71□□□□□ -1.66
CD44-202ENST00000278385 MLPHQ9BV36 600 aaPredicted RBP4.71□□□□□ -1.66
CD44-202ENST00000278385 STRA6Q9BX79 667 aa4.71□□□□□ -1.66
CD44-202ENST00000278385 KRTAP9-9Q9BYP9 154 aa4.71□□□□□ -1.66
CD44-202ENST00000278385 KRTAP9-4Q9BYQ2 154 aa4.71□□□□□ -1.66
CD44-202ENST00000278385 GCOM2Q9BZD3 368 aaPredicted RBP4.71□□□□□ -1.66
CD44-202ENST00000278385 KLC2Q9H0B6 622 aa4.71□□□□□ -1.66
CD44-202ENST00000278385 MEGF9Q9H1U4 602 aa4.71□□□□□ -1.66
CD44-202ENST00000278385 DPH5Q9H2P9 285 aa4.71□□□□□ -1.66
CD44-202ENST00000278385 VCPKMTQ9H867 229 aa4.71□□□□□ -1.66
CD44-202ENST00000278385 MBNL1Q9NR56 388 aaKnown RBP4.71□□□□□ -1.66
CD44-202ENST00000278385 PCDHB16Q9NRJ7 776 aa4.71□□□□□ -1.66
CD44-202ENST00000278385 GLRX2Q9NS18 164 aa4.71□□□□□ -1.66
CD44-202ENST00000278385 TMEM51Q9NW97 253 aa4.71□□□□□ -1.66
CD44-202ENST00000278385 CWC15Q9P013 229 aaKnown RBP4.71□□□□□ -1.66
CD44-202ENST00000278385 LIMA1Q9UHB6 759 aaKnown RBP4.71□□□□□ -1.66
CD44-202ENST00000278385 MID2Q9UJV3 735 aa4.71□□□□□ -1.66
CD44-202ENST00000278385 CAPN11Q9UMQ6 739 aa4.71□□□□□ -1.66
CD44-202ENST00000278385 RPH3AQ9Y2J0 694 aaPredicted RBP4.71□□□□□ -1.66
CD44-202ENST00000278385 KCNE2Q9Y6J6 123 aa4.71□□□□□ -1.66
CD44-202ENST00000278385 DLG5Q8TDM6 1919 aa4.71□□□□□ -1.66
CD44-202ENST00000278385 SLX4Q8IY92 1834 aa4.71□□□□□ -1.66
CD44-202ENST00000278385 ANKRD31Q8N7Z5 1873 aa4.71□□□□□ -1.66
CD44-202ENST00000278385 XDHP47989 1333 aa4.71□□□□□ -1.66
CD44-202ENST00000278385 MROH5Q6ZUA9 1318 aa4.71□□□□□ -1.66
CD44-202ENST00000278385 ZNF521Q96K83 1311 aa4.71□□□□□ -1.66
CD44-202ENST00000278385 DLEC1Q9Y238 1755 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 WDR90Q96KV7 1748 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 FRMD3A2A2Y4 597 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 CTAGE15A4D2H0 777 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 C2orf78A6NCI8 922 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 LRRIQ4A6NIV6 560 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 LRRC72A6NJI9 287 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 OR6C76A6NM76 312 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 YDJCA8MPS7 323 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 HNRNPCL2B2RXH8 293 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 PATE3B3GLJ2 98 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 L7N2F9 121 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 CTAGE5O15320 804 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 BCAT2O15382 392 aaPredicted RBP4.7□□□□□ -1.66
CD44-202ENST00000278385 PRPF4O43172 522 aaKnown RBP eCLIP4.7□□□□□ -1.66
CD44-202ENST00000278385 VEGFDO43915 354 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 ECE2O60344 883 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 HNRNPCL1O60812 293 aaKnown RBP4.7□□□□□ -1.66
CD44-202ENST00000278385 IPO13O94829 963 aaKnown RBP4.7□□□□□ -1.66
CD44-202ENST00000278385 OR2C1O95371 312 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 STAMBPO95630 424 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 EIF2S1P05198 315 aaKnown RBP4.7□□□□□ -1.66
CD44-202ENST00000278385 ASGR1P07306 291 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 TUBBP07437 444 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 CTAGE8P0CG41 777 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 TPBGLP0DKB5 382 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 GHRP10912 638 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 CDH2P19022 906 aaPredicted RBP4.7□□□□□ -1.66
CD44-202ENST00000278385 GNAT2P19087 354 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 CASTP20810 708 aaKnown RBP4.7□□□□□ -1.66
CD44-202ENST00000278385 PTPN3P26045 913 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 GNL1P36915 607 aaPredicted RBP4.7□□□□□ -1.66
CD44-202ENST00000278385 LIG4P49917 911 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 NPY4RP50391 375 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 GBX2P52951 348 aaPredicted RBP4.7□□□□□ -1.66
CD44-202ENST00000278385 CASP9P55211 416 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 RPL7AP62424 266 aaKnown RBP4.7□□□□□ -1.66
CD44-202ENST00000278385 TUBB4BP68371 445 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 ARHGAP8P85298 464 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 MEF2AQ02078 507 aaPredicted RBP4.7□□□□□ -1.66
CD44-202ENST00000278385 HGFACQ04756 655 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 RELQ04864 619 aaPredicted RBP4.7□□□□□ -1.66
CD44-202ENST00000278385 PRKCZQ05513 592 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 RNASELQ05823 741 aaKnown RBP4.7□□□□□ -1.66
CD44-202ENST00000278385 GABPB1Q06547 395 aaPredicted RBP4.7□□□□□ -1.66
CD44-202ENST00000278385 SLFN5Q08AF3 891 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 EFEMP1Q12805 493 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 TRA2AQ13595 282 aaKnown RBP eCLIP4.7□□□□□ -1.66
CD44-202ENST00000278385 HABP2Q14520 560 aaPredicted RBP4.7□□□□□ -1.66
CD44-202ENST00000278385 ICAM4Q14773 271 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 RPS6KA2Q15349 733 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 SYCP1Q15431 976 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 DEFB115Q30KQ5 88 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 COLEC12Q5KU26 742 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 CCDC122Q5T0U0 273 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 CYP4A22Q5TCH4 519 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 CENPPQ6IPU0 288 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 GADL1Q6ZQY3 521 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 PTCHD4Q6ZW05 846 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 GAREM2Q75VX8 874 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 MARK2Q7KZI7 788 aaKnown RBP4.7□□□□□ -1.66
CD44-202ENST00000278385 CHST9Q7L1S5 443 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 CACNA2D4Q7Z3S7 1137 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 DSG4Q86SJ6 1040 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 CTAGE6Q86UF2 777 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 CTAGE4Q8IX94 777 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 FUKQ8N0W3 1084 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 SPERTQ8NA61 448 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 AGBL3Q8NEM8 1001 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 GPR156Q8NFN8 814 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 OR52K1Q8NGK4 314 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 IFI44Q8TCB0 444 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms