RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 MARCOQ9UEW3 520 aaPredicted RBP9.64□□□□□ -0.87
TRIM55-201ENST00000276573 HAO1Q9UJM8 370 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 DNAJC16Q9Y2G8 782 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 ARL5AQ9Y689 179 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 PTPRSQ13332 1948 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 A0A087X1B8 175 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.64□□□□□ -0.87
TRIM55-201ENST00000276573 TYW5A2RUC4 315 aaKnown RBP9.64□□□□□ -0.87
TRIM55-201ENST00000276573 OR51F1A6NGY5 319 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 TARM1B6A8C7 271 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 CCL22O00626 93 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 BUD23O43709 281 aaKnown RBP9.64□□□□□ -0.87
TRIM55-201ENST00000276573 RPP40O75818 363 aaKnown RBP9.64□□□□□ -0.87
TRIM55-201ENST00000276573 ADH1AP07327 375 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 C8AP07357 584 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 PIRTP0C851 137 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 TARSP26639 723 aaKnown RBP9.64□□□□□ -0.87
TRIM55-201ENST00000276573 ARRB2P32121 409 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 SLC12A2P55011 1212 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 KCNJ2P63252 427 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 ELF3P78545 371 aaPredicted RBP9.64□□□□□ -0.87
TRIM55-201ENST00000276573 NSUN2Q08J23 767 aaKnown RBP eCLIP9.64□□□□□ -0.87
TRIM55-201ENST00000276573 DLG1Q12959 904 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 PPIGQ13427 754 aaKnown RBP eCLIP9.64□□□□□ -0.87
TRIM55-201ENST00000276573 ZNF460Q14592 562 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 PTPRCAPQ14761 206 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 INO80DQ53TQ3 878 aaPredicted RBP9.64□□□□□ -0.87
TRIM55-201ENST00000276573 LRRC8EQ6NSJ5 796 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 LINGO4Q6UY18 593 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 ZYG11AQ6WRX3 759 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 RNF135Q8IUD6 432 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 WDR75Q8IWA0 830 aaKnown RBP9.64□□□□□ -0.87
TRIM55-201ENST00000276573 FSTL5Q8N475 847 aaPredicted RBP9.64□□□□□ -0.87
TRIM55-201ENST00000276573 GPR150Q8NGU9 434 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 PPP4R1Q8TF05 950 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 SREK1Q8WXA9 508 aaKnown RBP9.64□□□□□ -0.87
TRIM55-201ENST00000276573 DNAJC1Q96KC8 554 aaKnown RBP9.64□□□□□ -0.87
TRIM55-201ENST00000276573 SCYL1Q96KG9 808 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 EXOC2Q96KP1 924 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 WWP1Q9H0M0 922 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 SUDS3Q9H7L9 328 aaPredicted RBP9.64□□□□□ -0.87
TRIM55-201ENST00000276573 KLC4Q9NSK0 619 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 PNPOQ9NVS9 261 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 MARCH4Q9P2E8 410 aaPredicted RBP9.64□□□□□ -0.87
TRIM55-201ENST00000276573 LSM7Q9UK45 103 aaKnown RBP9.64□□□□□ -0.87
TRIM55-201ENST00000276573 ZNF510Q9Y2H8 683 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 KIAA1671Q9BY89 1806 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 CCDC162PA2VCL2 907 aa9.63□□□□□ -0.87
TRIM55-201ENST00000276573 FCHO1O14526 889 aa9.63□□□□□ -0.87
TRIM55-201ENST00000276573 CD3EAPO15446 510 aaKnown RBP9.63□□□□□ -0.87
TRIM55-201ENST00000276573 H2AFYO75367 372 aaKnown RBP9.63□□□□□ -0.87
TRIM55-201ENST00000276573 TMCC1O94876 653 aa9.63□□□□□ -0.87
TRIM55-201ENST00000276573 GLP2RO95838 553 aa9.63□□□□□ -0.87
TRIM55-201ENST00000276573 GOT2P00505 430 aaKnown RBP9.63□□□□□ -0.87
TRIM55-201ENST00000276573 PDHA1P08559 390 aa9.63□□□□□ -0.87
TRIM55-201ENST00000276573 HNRNPH1P31943 449 aaKnown RBP9.63□□□□□ -0.87
TRIM55-201ENST00000276573 PRKAA2P54646 552 aa9.63□□□□□ -0.87
TRIM55-201ENST00000276573 ERVFC1P60507 584 aa9.63□□□□□ -0.87
TRIM55-201ENST00000276573 ILF2Q12905 390 aaKnown RBP9.63□□□□□ -0.87
TRIM55-201ENST00000276573 TSNAXIP1Q2TAA8 658 aa9.63□□□□□ -0.87
TRIM55-201ENST00000276573 FAM91A1Q658Y4 838 aa9.63□□□□□ -0.87
TRIM55-201ENST00000276573 NCEH1Q6PIU2 408 aa9.63□□□□□ -0.87
TRIM55-201ENST00000276573 NAPRTQ6XQN6 538 aa9.63□□□□□ -0.87
TRIM55-201ENST00000276573 ELMOD1Q8N336 334 aa9.63□□□□□ -0.87
TRIM55-201ENST00000276573 CPXM2Q8N436 756 aa9.63□□□□□ -0.87
TRIM55-201ENST00000276573 KIF2BQ8N4N8 673 aa9.63□□□□□ -0.87
TRIM55-201ENST00000276573 PNPLA1Q8N8W4 532 aa9.63□□□□□ -0.87
TRIM55-201ENST00000276573 OR13C4Q8NGS5 318 aa9.63□□□□□ -0.87
TRIM55-201ENST00000276573 INPP5DQ92835 1189 aa9.63□□□□□ -0.87
TRIM55-201ENST00000276573 BADQ92934 168 aa9.63□□□□□ -0.87
TRIM55-201ENST00000276573 SLC7A6OSQ96CW6 309 aaPredicted RBP9.63□□□□□ -0.87
TRIM55-201ENST00000276573 RMDN1Q96DB5 314 aa9.63□□□□□ -0.87
TRIM55-201ENST00000276573 CDKN2AIPNLQ96HQ2 116 aa9.63□□□□□ -0.87
TRIM55-201ENST00000276573 NSL1Q96IY1 281 aa9.63□□□□□ -0.87
TRIM55-201ENST00000276573 RAD9AQ99638 391 aa9.63□□□□□ -0.87
TRIM55-201ENST00000276573 OLFM1Q99784 485 aa9.63□□□□□ -0.87
TRIM55-201ENST00000276573 SIKE1Q9BRV8 207 aa9.63□□□□□ -0.87
TRIM55-201ENST00000276573 GATA5Q9BWX5 397 aaPredicted RBP9.63□□□□□ -0.87
TRIM55-201ENST00000276573 ARL8BQ9NVJ2 186 aa9.63□□□□□ -0.87
TRIM55-201ENST00000276573 NLE1Q9NVX2 485 aaPredicted RBP9.63□□□□□ -0.87
TRIM55-201ENST00000276573 CXXC1Q9P0U4 656 aaPredicted RBP9.63□□□□□ -0.87
TRIM55-201ENST00000276573 DNMT3BQ9UBC3 853 aaKnown RBP9.63□□□□□ -0.87
TRIM55-201ENST00000276573 VWA7Q9Y334 891 aa9.63□□□□□ -0.87
TRIM55-201ENST00000276573 PCDHGC4Q9Y5F7 938 aa9.63□□□□□ -0.87
TRIM55-201ENST00000276573 SPO11Q9Y5K1 396 aa9.63□□□□□ -0.87
TRIM55-201ENST00000276573 RAI2Q9Y5P3 530 aa9.63□□□□□ -0.87
TRIM55-201ENST00000276573 IRAK3Q9Y616 596 aa9.63□□□□□ -0.87
TRIM55-201ENST00000276573 PLXNA4Q9HCM2 1894 aa9.63□□□□□ -0.87
TRIM55-201ENST00000276573 TRAV19A0A0A6YYK7 116 aa9.63□□□□□ -0.87
TRIM55-201ENST00000276573 A0A1W2PRU2 124 aa9.63□□□□□ -0.87
TRIM55-201ENST00000276573 TMEM114B3SHH9 223 aa9.63□□□□□ -0.87
TRIM55-201ENST00000276573 TK2O00142 265 aa9.63□□□□□ -0.87
TRIM55-201ENST00000276573 CBX6O95503 412 aa9.63□□□□□ -0.87
TRIM55-201ENST00000276573 CRTAMO95727 393 aa9.63□□□□□ -0.87
TRIM55-201ENST00000276573 ATP5BP06576 529 aaKnown RBP9.63□□□□□ -0.87
TRIM55-201ENST00000276573 CKMP06732 381 aa9.63□□□□□ -0.87
TRIM55-201ENST00000276573 MYL4P12829 197 aa9.63□□□□□ -0.87
TRIM55-201ENST00000276573 GJA1P17302 382 aa9.63□□□□□ -0.87
TRIM55-201ENST00000276573 PSMA3P25788 255 aa9.63□□□□□ -0.87
TRIM55-201ENST00000276573 CDC25CP30307 473 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms