RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 SLC9A3R1O14745 358 aaPredicted RBP11.52□□□□□ -0.57
USP53-201ENST00000274030 HDAC3O15379 428 aa11.52□□□□□ -0.57
USP53-201ENST00000274030 GUCY1B2O75343 617 aa11.52□□□□□ -0.57
USP53-201ENST00000274030 CST3P01034 146 aaPredicted RBP11.52□□□□□ -0.57
USP53-201ENST00000274030 C9orf57Q5W0N0 161 aa11.52□□□□□ -0.57
USP53-201ENST00000274030 OTOP3Q7RTS5 596 aa11.52□□□□□ -0.57
USP53-201ENST00000274030 PANX1Q96RD7 426 aa11.52□□□□□ -0.57
USP53-201ENST00000274030 SPAG4Q9NPE6 437 aa11.52□□□□□ -0.57
USP53-201ENST00000274030 MCM8Q9UJA3 840 aa11.52□□□□□ -0.57
USP53-201ENST00000274030 LEF1Q9UJU2 399 aaPredicted RBP11.52□□□□□ -0.57
USP53-201ENST00000274030 DEPDC5O75140 1603 aa11.52□□□□□ -0.57
USP53-201ENST00000274030 A0A1W2PQH9 124 aa11.52□□□□□ -0.57
USP53-201ENST00000274030 RGSL1A5PLK6 1076 aa11.52□□□□□ -0.57
USP53-201ENST00000274030 GSTM5P46439 218 aa11.52□□□□□ -0.57
USP53-201ENST00000274030 EIF2B2P49770 351 aaKnown RBP11.52□□□□□ -0.57
USP53-201ENST00000274030 DGUOKQ16854 277 aa11.52□□□□□ -0.57
USP53-201ENST00000274030 FBXO48Q5FWF7 155 aa11.52□□□□□ -0.57
USP53-201ENST00000274030 DCLRE1AQ6PJP8 1040 aa11.52□□□□□ -0.57
USP53-201ENST00000274030 HIPK1Q86Z02 1210 aa11.52□□□□□ -0.57
USP53-201ENST00000274030 ACSS3Q9H6R3 686 aa11.52□□□□□ -0.57
USP53-201ENST00000274030 R3HDM2Q9Y2K5 976 aaKnown RBP11.52□□□□□ -0.57
USP53-201ENST00000274030 DISP2A7MBM2 1401 aa11.52□□□□□ -0.57
USP53-201ENST00000274030 LRRC14BA6NHZ5 514 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 FSCN2O14926 492 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 PPP1R11O60927 126 aaPredicted RBP11.51□□□□□ -0.57
USP53-201ENST00000274030 GRM5P41594 1212 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 PTDSS1P48651 473 aaKnown RBP11.51□□□□□ -0.57
USP53-201ENST00000274030 DLG2Q15700 870 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 HYIQ5T013 277 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 C16orf62Q7Z3J2 963 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 ZFRQ96KR1 1074 aaKnown RBP11.51□□□□□ -0.57
USP53-201ENST00000274030 ENOPH1Q9UHY7 261 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 FOXO6A8MYZ6 492 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 NEDD8-MDP1E9PL57 170 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 SNPHO15079 494 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 CXCL14O95715 111 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 CCNE2O96020 404 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 ITGADQ13349 1161 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 INTS11Q5TA45 600 aaKnown RBP11.51□□□□□ -0.57
USP53-201ENST00000274030 PACS1Q6VY07 963 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 KIAA0408Q6ZU52 694 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 SKA1Q96BD8 255 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 TRIM8Q9BZR9 551 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 WDR55Q9H6Y2 383 aaPredicted RBP11.51□□□□□ -0.57
USP53-201ENST00000274030 TMEM216Q9P0N5 145 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 OGDHLQ9ULD0 1010 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 GMPPBQ9Y5P6 360 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 NDUFS2O75306 463 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 ITGAXP20702 1163 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 PSEN1P49768 467 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 FLT3LGP49771 235 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 TAF10Q12962 218 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 PLA2G4EQ3MJ16 856 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 SPDYCQ5MJ68 293 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 R3HCC1LQ7Z5L2 792 aaKnown RBP11.51□□□□□ -0.57
USP53-201ENST00000274030 LDB1Q86U70 411 aaPredicted RBP11.51□□□□□ -0.57
USP53-201ENST00000274030 HJURPQ8NCD3 748 aaPredicted RBP11.51□□□□□ -0.57
USP53-201ENST00000274030 ATL1Q8WXF7 558 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 DEFB118Q96PH6 123 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 FERD3LQ96RJ6 166 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 SLITRK2Q9H156 845 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 C12orf65Q9H3J6 166 aaKnown RBP11.51□□□□□ -0.57
USP53-201ENST00000274030 VWA7Q9Y334 891 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 REXO2Q9Y3B8 237 aaKnown RBP11.51□□□□□ -0.57
USP53-201ENST00000274030 RAP2CQ9Y3L5 183 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 RIC1Q4ADV7 1423 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 KLRG2A4D1S0 409 aaPredicted RBP11.51□□□□□ -0.57
USP53-201ENST00000274030 IQCF5A8MTL0 148 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 C1QTNF3-AMACRE9PGA6 284 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 TP73O15350 636 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 IL6P05231 212 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 LIPMQ5VYY2 423 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 SMYD1Q8NB12 490 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 PPP3R2Q96LZ3 170 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 NPAS2Q99743 824 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 EPB41L1Q9H4G0 881 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 EHD3Q9NZN3 535 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 VAV3Q9UKW4 847 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 SYNPO2Q9UMS6 1093 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 AZIN1O14977 448 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 ADH1AP07327 375 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 CYP4B1P13584 511 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 RPL9P32969 192 aaKnown RBP11.51□□□□□ -0.57
USP53-201ENST00000274030 RPL4P36578 427 aaKnown RBP11.51□□□□□ -0.57
USP53-201ENST00000274030 PLPP4Q5VZY2 271 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 ZNF549Q6P9A3 640 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 PIWIL4Q7Z3Z4 852 aaKnown RBP11.51□□□□□ -0.57
USP53-201ENST00000274030 RASAL3Q86YV0 1011 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 TMEM199Q8N511 208 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 DCBLD1Q8N8Z6 715 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 MFSD14AQ96MC6 490 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 CNGB3Q9NQW8 809 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 U3KQV3 271 aa11.51□□□□□ -0.57
USP53-201ENST00000274030 IQCMA0A1B0GVH7 501 aa11.5□□□□□ -0.57
USP53-201ENST00000274030 EME2A4GXA9 379 aaPredicted RBP11.5□□□□□ -0.57
USP53-201ENST00000274030 ACSL4O60488 711 aa11.5□□□□□ -0.57
USP53-201ENST00000274030 ZBTB11O95625 1053 aaPredicted RBP11.5□□□□□ -0.57
USP53-201ENST00000274030 CST1P01037 141 aa11.5□□□□□ -0.57
USP53-201ENST00000274030 C4BPBP20851 252 aa11.5□□□□□ -0.57
USP53-201ENST00000274030 ITPKAP23677 461 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms