RNA–Protein interactions for RNA: ENST00000270066.10

SMG9-201, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG9, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-201ENST00000270066 BEND7Q8N7W2 519 aaPredicted RBP13.34□□□□□ -0.27
SMG9-201ENST00000270066 ATAD1Q8NBU5 361 aa13.34□□□□□ -0.27
SMG9-201ENST00000270066 CKAP2Q8WWK9 683 aa13.34□□□□□ -0.27
SMG9-201ENST00000270066 DNAJC1Q96KC8 554 aaKnown RBP13.34□□□□□ -0.27
SMG9-201ENST00000270066 FERD3LQ96RJ6 166 aa13.34□□□□□ -0.27
SMG9-201ENST00000270066 FBXO5Q9UKT4 447 aa13.34□□□□□ -0.27
SMG9-201ENST00000270066 SLC12A4Q9UP95 1085 aa13.34□□□□□ -0.27
SMG9-201ENST00000270066 COPG1Q9Y678 874 aaKnown RBP13.34□□□□□ -0.27
SMG9-201ENST00000270066 A0A1B0GW55 424 aa13.34□□□□□ -0.27
SMG9-201ENST00000270066 MSI1O43347 362 aaKnown RBP13.34□□□□□ -0.27
SMG9-201ENST00000270066 OR4Q2P0C623 313 aa13.34□□□□□ -0.27
SMG9-201ENST00000270066 DUX4L2P0CJ85 424 aa13.34□□□□□ -0.27
SMG9-201ENST00000270066 DUX4L3P0CJ86 424 aa13.34□□□□□ -0.27
SMG9-201ENST00000270066 DUX4L4P0CJ87 422 aa13.34□□□□□ -0.27
SMG9-201ENST00000270066 DUX4L5P0CJ88 424 aa13.34□□□□□ -0.27
SMG9-201ENST00000270066 DUX4L6P0CJ89 424 aa13.34□□□□□ -0.27
SMG9-201ENST00000270066 DUX4L7P0CJ90 424 aa13.34□□□□□ -0.27
SMG9-201ENST00000270066 YBEYP58557 167 aaPredicted RBP13.34□□□□□ -0.27
SMG9-201ENST00000270066 ELP6Q0PNE2 266 aa13.34□□□□□ -0.27
SMG9-201ENST00000270066 TRIM25Q14258 630 aaKnown RBP13.34□□□□□ -0.27
SMG9-201ENST00000270066 AADATQ8N5Z0 425 aa13.34□□□□□ -0.27
SMG9-201ENST00000270066 RNF145Q96MT1 663 aa13.34□□□□□ -0.27
SMG9-201ENST00000270066 CPXM1Q96SM3 734 aa13.34□□□□□ -0.27
SMG9-201ENST00000270066 HNRNPABQ99729 332 aaKnown RBP13.34□□□□□ -0.27
SMG9-201ENST00000270066 RNPEPL1Q9HAU8 725 aa13.34□□□□□ -0.27
SMG9-201ENST00000270066 DUX4Q9UBX2 424 aa13.34□□□□□ -0.27
SMG9-201ENST00000270066 ZNF232Q9UNY5 417 aa13.34□□□□□ -0.27
SMG9-201ENST00000270066 HBS1LQ9Y450 684 aaKnown RBP13.34□□□□□ -0.27
SMG9-201ENST00000270066 ARIH1Q9Y4X5 557 aaPredicted RBP13.34□□□□□ -0.27
SMG9-201ENST00000270066 SIGLEC1Q9BZZ2 1709 aa13.34□□□□□ -0.27
SMG9-201ENST00000270066 E9PAM4 449 aa13.33□□□□□ -0.27
SMG9-201ENST00000270066 TULP2O00295 520 aa13.33□□□□□ -0.27
SMG9-201ENST00000270066 GRIA4P48058 902 aa13.33□□□□□ -0.27
SMG9-201ENST00000270066 NAGLUP54802 743 aa13.33□□□□□ -0.27
SMG9-201ENST00000270066 XKR6Q5GH73 641 aa13.33□□□□□ -0.27
SMG9-201ENST00000270066 CSPG4P5Q96PW8 444 aa13.33□□□□□ -0.27
SMG9-201ENST00000270066 PCDHB18PQ96TA0 734 aa13.33□□□□□ -0.27
SMG9-201ENST00000270066 DAPK2Q9UIK4 370 aa13.33□□□□□ -0.27
SMG9-201ENST00000270066 RECQL5O94762 991 aaPredicted RBP13.33□□□□□ -0.28
SMG9-201ENST00000270066 EFCAB3Q8N7B9 438 aa13.33□□□□□ -0.28
SMG9-201ENST00000270066 POU5F2Q8N7G0 328 aa13.33□□□□□ -0.28
SMG9-201ENST00000270066 KCTD4Q8WVF5 259 aa13.33□□□□□ -0.28
SMG9-201ENST00000270066 HDAC10Q969S8 669 aa13.33□□□□□ -0.28
SMG9-201ENST00000270066 ZNF184Q99676 751 aaPredicted RBP13.33□□□□□ -0.28
SMG9-201ENST00000270066 C9orf16Q9BUW7 83 aa13.33□□□□□ -0.28
SMG9-201ENST00000270066 SPATA5L1Q9BVQ7 753 aa13.33□□□□□ -0.28
SMG9-201ENST00000270066 B3GNT5Q9BYG0 378 aa13.33□□□□□ -0.28
SMG9-201ENST00000270066 ATRNL1Q5VV63 1379 aa13.33□□□□□ -0.28
SMG9-201ENST00000270066 GPR25O00155 361 aa13.33□□□□□ -0.28
SMG9-201ENST00000270066 IFNA16P05015 189 aa13.33□□□□□ -0.28
SMG9-201ENST00000270066 CLK3P49761 638 aaKnown RBP13.33□□□□□ -0.28
SMG9-201ENST00000270066 MAPK10P53779 464 aa13.33□□□□□ -0.28
SMG9-201ENST00000270066 COPZ1P61923 177 aa13.33□□□□□ -0.28
SMG9-201ENST00000270066 PRKCZQ05513 592 aa13.33□□□□□ -0.28
SMG9-201ENST00000270066 ABRQ12979 859 aa13.33□□□□□ -0.28
SMG9-201ENST00000270066 KCTD19Q17RG1 926 aaPredicted RBP13.33□□□□□ -0.28
SMG9-201ENST00000270066 FAM151BQ6UXP7 276 aa13.33□□□□□ -0.28
SMG9-201ENST00000270066 AGMOQ6ZNB7 445 aa13.33□□□□□ -0.28
SMG9-201ENST00000270066 SLC26A9Q7LBE3 791 aa13.33□□□□□ -0.28
SMG9-201ENST00000270066 NAT16Q8N8M0 369 aa13.33□□□□□ -0.28
SMG9-201ENST00000270066 DLG3Q92796 817 aa13.33□□□□□ -0.28
SMG9-201ENST00000270066 CDRT15Q96T59 188 aa13.33□□□□□ -0.28
SMG9-201ENST00000270066 TPSB2P20231 275 aa13.33□□□□□ -0.28
SMG9-201ENST00000270066 PAICSP22234 425 aaKnown RBP13.33□□□□□ -0.28
SMG9-201ENST00000270066 AUHQ13825 339 aaKnown RBP13.33□□□□□ -0.28
SMG9-201ENST00000270066 TPSAB1Q15661 275 aa13.33□□□□□ -0.28
SMG9-201ENST00000270066 KLHL35Q6PF15 583 aa13.33□□□□□ -0.28
SMG9-201ENST00000270066 LUZP2Q86TE4 346 aa13.33□□□□□ -0.28
SMG9-201ENST00000270066 CFAP52Q8N1V2 620 aa13.33□□□□□ -0.28
SMG9-201ENST00000270066 PTCD2Q8WV60 388 aaKnown RBP13.33□□□□□ -0.28
SMG9-201ENST00000270066 CD101Q93033 1021 aa13.33□□□□□ -0.28
SMG9-201ENST00000270066 KCTD15Q96SI1 283 aaPredicted RBP13.33□□□□□ -0.28
SMG9-201ENST00000270066 AGO3Q9H9G7 860 aaKnown RBP13.33□□□□□ -0.28
SMG9-201ENST00000270066 RCCD1A6NED2 376 aa13.32□□□□□ -0.28
SMG9-201ENST00000270066 VAV1P15498 845 aa13.32□□□□□ -0.28
SMG9-201ENST00000270066 TEX44Q53QW1 395 aa13.32□□□□□ -0.28
SMG9-201ENST00000270066 LIPMQ5VYY2 423 aa13.32□□□□□ -0.28
SMG9-201ENST00000270066 BNIPLQ7Z465 357 aa13.32□□□□□ -0.28
SMG9-201ENST00000270066 VN1R5Q7Z5H4 357 aa13.32□□□□□ -0.28
SMG9-201ENST00000270066 PLD4Q96BZ4 506 aa13.32□□□□□ -0.28
SMG9-201ENST00000270066 LINGO1Q96FE5 620 aa13.32□□□□□ -0.28
SMG9-201ENST00000270066 KLHL5Q96PQ7 755 aa13.32□□□□□ -0.28
SMG9-201ENST00000270066 LEF1Q9UJU2 399 aaPredicted RBP13.32□□□□□ -0.28
SMG9-201ENST00000270066 TMA7Q9Y2S6 64 aaKnown RBP13.32□□□□□ -0.28
SMG9-201ENST00000270066 KCNE2Q9Y6J6 123 aa13.32□□□□□ -0.28
SMG9-201ENST00000270066 ALOX15BO15296 676 aa13.32□□□□□ -0.28
SMG9-201ENST00000270066 RPP40O75818 363 aaKnown RBP13.32□□□□□ -0.28
SMG9-201ENST00000270066 OR6A2O95222 327 aa13.32□□□□□ -0.28
SMG9-201ENST00000270066 C1RP00736 705 aa13.32□□□□□ -0.28
SMG9-201ENST00000270066 PIRTP0C851 137 aa13.32□□□□□ -0.28
SMG9-201ENST00000270066 CRATP43155 626 aa13.32□□□□□ -0.28
SMG9-201ENST00000270066 CDH4P55283 916 aa13.32□□□□□ -0.28
SMG9-201ENST00000270066 MON1BQ7L1V2 547 aa13.32□□□□□ -0.28
SMG9-201ENST00000270066 OTOP2Q7RTS6 562 aa13.32□□□□□ -0.28
SMG9-201ENST00000270066 IFNL1Q8IU54 200 aa13.32□□□□□ -0.28
SMG9-201ENST00000270066 CLVS1Q8IUQ0 354 aaPredicted RBP13.32□□□□□ -0.28
SMG9-201ENST00000270066 RAVER1Q8IY67 606 aaKnown RBP13.32□□□□□ -0.28
SMG9-201ENST00000270066 C7orf61Q8IZ16 206 aa13.32□□□□□ -0.28
SMG9-201ENST00000270066 OR6Y1Q8NGX8 325 aa13.32□□□□□ -0.28
SMG9-201ENST00000270066 NELL1Q92832 810 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms