RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 TOP1MTQ969P6 601 aa27.66■■■□□ 2.02
CBX4-201ENST00000269397 BRD8Q9H0E9 1235 aa27.66■■■□□ 2.02
CBX4-201ENST00000269397 SMOXQ9NWM0 555 aa27.66■■■□□ 2.02
CBX4-201ENST00000269397 COL1A2P08123 1366 aa27.66■■■□□ 2.02
CBX4-201ENST00000269397 MYLKQ15746 1914 aa27.65■■■□□ 2.02
CBX4-201ENST00000269397 SOX11P35716 441 aa27.65■■■□□ 2.02
CBX4-201ENST00000269397 CYHR1Q6ZMK1 362 aa27.65■■■□□ 2.02
CBX4-201ENST00000269397 DEFB132Q7Z7B7 95 aa27.65■■■□□ 2.02
CBX4-201ENST00000269397 TFAP2CQ92754 450 aa27.65■■■□□ 2.02
CBX4-201ENST00000269397 C3orf30Q96M34 536 aa27.65■■■□□ 2.02
CBX4-201ENST00000269397 PTGDR2Q9Y5Y4 395 aa27.65■■■□□ 2.02
CBX4-201ENST00000269397 ZBTB7AO95365 584 aa27.65■■■□□ 2.02
CBX4-201ENST00000269397 DNAJB13P59910 316 aa27.65■■■□□ 2.02
CBX4-201ENST00000269397 PCSK7Q16549 785 aa27.65■■■□□ 2.02
CBX4-201ENST00000269397 SLC45A3Q96JT2 553 aa27.65■■■□□ 2.02
CBX4-201ENST00000269397 SLC25A23Q9BV35 468 aa27.65■■■□□ 2.02
CBX4-201ENST00000269397 ARHGEF38Q9NXL2 777 aa27.65■■■□□ 2.02
CBX4-201ENST00000269397 TCAF1Q9Y4C2 921 aa27.65■■■□□ 2.02
CBX4-201ENST00000269397 C16orf72Q14CZ0 275 aa27.64■■■□□ 2.02
CBX4-201ENST00000269397 SPPL2CQ8IUH8 684 aa27.64■■■□□ 2.02
CBX4-201ENST00000269397 FUNDC1Q8IVP5 155 aa27.64■■■□□ 2.02
CBX4-201ENST00000269397 ANKRD49Q8WVL7 239 aa27.64■■■□□ 2.02
CBX4-201ENST00000269397 UHRF1Q96T88 793 aaPredicted RBP27.64■■■□□ 2.02
CBX4-201ENST00000269397 SLC8A2Q9UPR5 921 aa27.64■■■□□ 2.02
CBX4-201ENST00000269397 AAR2Q9Y312 384 aaKnown RBP27.64■■■□□ 2.02
CBX4-201ENST00000269397 TRAF6Q9Y4K3 522 aa27.64■■■□□ 2.02
CBX4-201ENST00000269397 MYBPHLA2RUH7 354 aa27.64■■■□□ 2.02
CBX4-201ENST00000269397 PNPLA4P41247 253 aa27.64■■■□□ 2.02
CBX4-201ENST00000269397 PPP4R4Q6NUP7 873 aa27.64■■■□□ 2.02
CBX4-201ENST00000269397 TTC33Q6PID6 262 aaPredicted RBP27.64■■■□□ 2.02
CBX4-201ENST00000269397 GPR141Q7Z602 305 aa27.64■■■□□ 2.02
CBX4-201ENST00000269397 LDB1Q86U70 411 aaPredicted RBP27.64■■■□□ 2.02
CBX4-201ENST00000269397 C2CD4AQ8NCU7 369 aaPredicted RBP27.64■■■□□ 2.02
CBX4-201ENST00000269397 ZMIZ2Q8NF64 920 aa27.64■■■□□ 2.02
CBX4-201ENST00000269397 OR2T34Q8NGX1 318 aa27.64■■■□□ 2.02
CBX4-201ENST00000269397 OR2T3Q8NH03 318 aa27.64■■■□□ 2.02
CBX4-201ENST00000269397 MIPOL1Q8TD10 442 aa27.64■■■□□ 2.02
CBX4-201ENST00000269397 ISOC1Q96CN7 298 aa27.64■■■□□ 2.02
CBX4-201ENST00000269397 UPF3AQ9H1J1 476 aaKnown RBP27.64■■■□□ 2.02
CBX4-201ENST00000269397 SQORQ9Y6N5 450 aa27.64■■■□□ 2.02
CBX4-201ENST00000269397 RALGAPA2Q2PPJ7 1873 aa27.64■■■□□ 2.01
CBX4-201ENST00000269397 A0A087X1B8 175 aa27.64■■■□□ 2.01
CBX4-201ENST00000269397 WARSP23381 471 aaKnown RBP27.64■■■□□ 2.01
CBX4-201ENST00000269397 INTS6LQ5JSJ4 861 aaKnown RBP27.64■■■□□ 2.01
CBX4-201ENST00000269397 TBCELQ5QJ74 424 aa27.64■■■□□ 2.01
CBX4-201ENST00000269397 LIMS2Q7Z4I7 341 aa27.64■■■□□ 2.01
CBX4-201ENST00000269397 RPL10LQ96L21 214 aaKnown RBP27.64■■■□□ 2.01
CBX4-201ENST00000269397 ALDOCP09972 364 aaKnown RBP27.63■■■□□ 2.01
CBX4-201ENST00000269397 AIF1P55008 147 aa27.63■■■□□ 2.01
CBX4-201ENST00000269397 NEPROQ6NW34 567 aa27.63■■■□□ 2.01
CBX4-201ENST00000269397 FNDC8Q8TC99 324 aa27.63■■■□□ 2.01
CBX4-201ENST00000269397 EXT2Q93063 718 aa27.63■■■□□ 2.01
CBX4-201ENST00000269397 ZFP42Q96MM3 310 aa27.63■■■□□ 2.01
CBX4-201ENST00000269397 FSD1LQ9BXM9 530 aa27.63■■■□□ 2.01
CBX4-201ENST00000269397 EML4Q9HC35 981 aaKnown RBP27.63■■■□□ 2.01
CBX4-201ENST00000269397 NR5A2O00482 541 aa27.63■■■□□ 2.01
CBX4-201ENST00000269397 CCL22O00626 93 aa27.63■■■□□ 2.01
CBX4-201ENST00000269397 DLGAP1O14490 977 aa27.63■■■□□ 2.01
CBX4-201ENST00000269397 SUPT7LO94864 414 aa27.63■■■□□ 2.01
CBX4-201ENST00000269397 KCNC1P48547 511 aa27.63■■■□□ 2.01
CBX4-201ENST00000269397 CDH13P55290 713 aa27.63■■■□□ 2.01
CBX4-201ENST00000269397 CAPRIN1Q14444 709 aaKnown RBP27.63■■■□□ 2.01
CBX4-201ENST00000269397 KIF19Q2TAC6 998 aa27.63■■■□□ 2.01
CBX4-201ENST00000269397 ANKDD1AQ495B1 522 aa27.63■■■□□ 2.01
CBX4-201ENST00000269397 EPHX4Q8IUS5 362 aa27.63■■■□□ 2.01
CBX4-201ENST00000269397 C12orf43Q96C57 262 aaKnown RBP27.63■■■□□ 2.01
CBX4-201ENST00000269397 TCF12Q99081 682 aa27.63■■■□□ 2.01
CBX4-201ENST00000269397 PPP2R3BQ9Y5P8 575 aa27.63■■■□□ 2.01
CBX4-201ENST00000269397 PFKPQ01813 784 aa27.62■■■□□ 2.01
CBX4-201ENST00000269397 AFAP1L2Q8N4X5 818 aa27.62■■■□□ 2.01
CBX4-201ENST00000269397 ATPAF2Q8N5M1 289 aa27.62■■■□□ 2.01
CBX4-201ENST00000269397 ANKFN1Q8N957 763 aa27.62■■■□□ 2.01
CBX4-201ENST00000269397 SHCBP1Q8NEM2 672 aa27.62■■■□□ 2.01
CBX4-201ENST00000269397 SH3RF2Q8TEC5 729 aa27.62■■■□□ 2.01
CBX4-201ENST00000269397 LZICQ8WZA0 190 aa27.62■■■□□ 2.01
CBX4-201ENST00000269397 PCED1BQ96HM7 432 aa27.62■■■□□ 2.01
CBX4-201ENST00000269397 MUC3BQ9H195 1237 aa27.62■■■□□ 2.01
CBX4-201ENST00000269397 GLOD4Q9HC38 313 aa27.62■■■□□ 2.01
CBX4-201ENST00000269397 NME4O00746 187 aa27.62■■■□□ 2.01
CBX4-201ENST00000269397 ZSCAN9O15535 394 aaPredicted RBP27.62■■■□□ 2.01
CBX4-201ENST00000269397 STAMBPO95630 424 aa27.62■■■□□ 2.01
CBX4-201ENST00000269397 TFPTP0C1Z6 253 aa27.62■■■□□ 2.01
CBX4-201ENST00000269397 CHRM3P20309 590 aa27.62■■■□□ 2.01
CBX4-201ENST00000269397 TUBA4AP68366 448 aa27.62■■■□□ 2.01
CBX4-201ENST00000269397 POU4F1Q01851 419 aa27.62■■■□□ 2.01
CBX4-201ENST00000269397 ERMP1Q7Z2K6 904 aa27.62■■■□□ 2.01
CBX4-201ENST00000269397 HM13Q8TCT9 377 aa27.62■■■□□ 2.01
CBX4-201ENST00000269397 ALG9Q9H6U8 611 aa27.62■■■□□ 2.01
CBX4-201ENST00000269397 BMP10O95393 424 aa27.61■■■□□ 2.01
CBX4-201ENST00000269397 VPS26BQ4G0F5 336 aa27.61■■■□□ 2.01
CBX4-201ENST00000269397 FAM45BPQ6NSW5 357 aa27.61■■■□□ 2.01
CBX4-201ENST00000269397 FAM45AQ8TCE6 357 aa27.61■■■□□ 2.01
CBX4-201ENST00000269397 MAML3Q96JK9 1138 aa27.61■■■□□ 2.01
CBX4-201ENST00000269397 FAR2Q96K12 515 aa27.61■■■□□ 2.01
CBX4-201ENST00000269397 NDFIP2Q9NV92 336 aa27.61■■■□□ 2.01
CBX4-201ENST00000269397 AP3B1O00203 1094 aa27.61■■■□□ 2.01
CBX4-201ENST00000269397 PPP6CO00743 305 aa27.61■■■□□ 2.01
CBX4-201ENST00000269397 HSPA8P11142 646 aaKnown RBP27.61■■■□□ 2.01
CBX4-201ENST00000269397 BMP2P12643 396 aa27.61■■■□□ 2.01
CBX4-201ENST00000269397 DARSP14868 501 aaKnown RBP27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms