RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 OR6P1Q8NGX9 317 aa16.72■□□□□ 0.27
CCDC40-201ENST00000269318 RDH11Q8TC12 318 aa16.72■□□□□ 0.27
CCDC40-201ENST00000269318 WFDC5Q8TCV5 224 aa16.72■□□□□ 0.27
CCDC40-201ENST00000269318 BADQ92934 168 aa16.72■□□□□ 0.27
CCDC40-201ENST00000269318 DNAJC1Q96KC8 554 aaKnown RBP16.72■□□□□ 0.27
CCDC40-201ENST00000269318 TBATAQ96M53 351 aa16.72■□□□□ 0.27
CCDC40-201ENST00000269318 ZBED2Q9BTP6 218 aa16.72■□□□□ 0.27
CCDC40-201ENST00000269318 TASP1Q9H6P5 420 aa16.72■□□□□ 0.27
CCDC40-201ENST00000269318 ARHGEF3Q9NR81 526 aa16.72■□□□□ 0.27
CCDC40-201ENST00000269318 MARCH4Q9P2E8 410 aaPredicted RBP16.72■□□□□ 0.27
CCDC40-201ENST00000269318 DNMT3BQ9UBC3 853 aaKnown RBP16.72■□□□□ 0.27
CCDC40-201ENST00000269318 OR51F1A6NGY5 319 aa16.71■□□□□ 0.27
CCDC40-201ENST00000269318 TARM1B6A8C7 271 aa16.71■□□□□ 0.27
CCDC40-201ENST00000269318 TK2O00142 265 aa16.71■□□□□ 0.27
CCDC40-201ENST00000269318 ATP5HO75947 161 aa16.71■□□□□ 0.27
CCDC40-201ENST00000269318 CKMP06732 381 aa16.71■□□□□ 0.27
CCDC40-201ENST00000269318 PIRTP0C851 137 aa16.71■□□□□ 0.27
CCDC40-201ENST00000269318 KITP10721 976 aa16.71■□□□□ 0.27
CCDC40-201ENST00000269318 DLG1Q12959 904 aa16.71■□□□□ 0.27
CCDC40-201ENST00000269318 PTPRCAPQ14761 206 aa16.71■□□□□ 0.27
CCDC40-201ENST00000269318 INO80DQ53TQ3 878 aaPredicted RBP16.71■□□□□ 0.27
CCDC40-201ENST00000269318 PACS2Q86VP3 889 aa16.71■□□□□ 0.27
CCDC40-201ENST00000269318 RNF135Q8IUD6 432 aa16.71■□□□□ 0.27
CCDC40-201ENST00000269318 PNPLA1Q8N8W4 532 aa16.71■□□□□ 0.27
CCDC40-201ENST00000269318 PIWIL2Q8TC59 973 aaKnown RBP16.71■□□□□ 0.27
CCDC40-201ENST00000269318 STYXQ8WUJ0 223 aa16.71■□□□□ 0.27
CCDC40-201ENST00000269318 KLHL29Q96CT2 875 aa16.71■□□□□ 0.27
CCDC40-201ENST00000269318 OLFM1Q99784 485 aa16.71■□□□□ 0.27
CCDC40-201ENST00000269318 TCF25Q9BQ70 676 aa16.71■□□□□ 0.27
CCDC40-201ENST00000269318 TMEM106CQ9BVX2 250 aa16.71■□□□□ 0.27
CCDC40-201ENST00000269318 LHX3Q9UBR4 397 aa16.71■□□□□ 0.27
CCDC40-201ENST00000269318 MID2Q9UJV3 735 aa16.71■□□□□ 0.27
CCDC40-201ENST00000269318 TRIM33Q9UPN9 1127 aa16.71■□□□□ 0.27
CCDC40-201ENST00000269318 RUVBL2Q9Y230 463 aaKnown RBP16.71■□□□□ 0.27
CCDC40-201ENST00000269318 SPO11Q9Y5K1 396 aa16.71■□□□□ 0.27
CCDC40-201ENST00000269318 TYW5A2RUC4 315 aaKnown RBP16.71■□□□□ 0.27
CCDC40-201ENST00000269318 RPP40O75818 363 aaKnown RBP16.71■□□□□ 0.27
CCDC40-201ENST00000269318 S1PR4O95977 384 aa16.71■□□□□ 0.27
CCDC40-201ENST00000269318 TARSP26639 723 aaKnown RBP16.71■□□□□ 0.27
CCDC40-201ENST00000269318 CSKP41240 450 aa16.71■□□□□ 0.27
CCDC40-201ENST00000269318 AQP5P55064 265 aa16.71■□□□□ 0.27
CCDC40-201ENST00000269318 ABCE1P61221 599 aaKnown RBP16.71■□□□□ 0.27
CCDC40-201ENST00000269318 KCNJ2P63252 427 aa16.71■□□□□ 0.27
CCDC40-201ENST00000269318 FPGSQ05932 587 aa16.71■□□□□ 0.27
CCDC40-201ENST00000269318 TMEM240Q5SV17 173 aa16.71■□□□□ 0.27
CCDC40-201ENST00000269318 ZYG11AQ6WRX3 759 aa16.71■□□□□ 0.27
CCDC40-201ENST00000269318 NAPRTQ6XQN6 538 aa16.71■□□□□ 0.27
CCDC40-201ENST00000269318 OR13C4Q8NGS5 318 aa16.71■□□□□ 0.27
CCDC40-201ENST00000269318 GPR150Q8NGU9 434 aa16.71■□□□□ 0.27
CCDC40-201ENST00000269318 PRR11Q96HE9 360 aaPredicted RBP16.71■□□□□ 0.27
CCDC40-201ENST00000269318 NDNQ99608 321 aa16.71■□□□□ 0.27
CCDC40-201ENST00000269318 SIKE1Q9BRV8 207 aa16.71■□□□□ 0.27
CCDC40-201ENST00000269318 SUDS3Q9H7L9 328 aaPredicted RBP16.71■□□□□ 0.27
CCDC40-201ENST00000269318 SAR1AQ9NR31 198 aa16.71■□□□□ 0.27
CCDC40-201ENST00000269318 OXSMQ9NWU1 459 aa16.71■□□□□ 0.27
CCDC40-201ENST00000269318 CFAP97Q9P2B7 532 aa16.71■□□□□ 0.27
CCDC40-201ENST00000269318 CPSF2Q9P2I0 782 aaKnown RBP16.71■□□□□ 0.27
CCDC40-201ENST00000269318 LSM7Q9UK45 103 aaKnown RBP16.71■□□□□ 0.27
CCDC40-201ENST00000269318 DNAJC16Q9Y2G8 782 aa16.71■□□□□ 0.27
CCDC40-201ENST00000269318 A0A087X1B8 175 aa16.7■□□□□ 0.26
CCDC40-201ENST00000269318 A0A1W2PRU2 124 aa16.7■□□□□ 0.26
CCDC40-201ENST00000269318 CCDC162PA2VCL2 907 aa16.7■□□□□ 0.26
CCDC40-201ENST00000269318 LCHNA4D1U4 455 aa16.7■□□□□ 0.26
CCDC40-201ENST00000269318 HIDE1A8MVS5 230 aa16.7■□□□□ 0.26
CCDC40-201ENST00000269318 BUD23O43709 281 aaKnown RBP16.7■□□□□ 0.26
CCDC40-201ENST00000269318 TRIM13O60858 407 aa16.7■□□□□ 0.26
CCDC40-201ENST00000269318 KLHL2O95198 593 aa16.7■□□□□ 0.26
CCDC40-201ENST00000269318 GOT2P00505 430 aaKnown RBP16.7■□□□□ 0.26
CCDC40-201ENST00000269318 PDHA1P08559 390 aa16.7■□□□□ 0.26
CCDC40-201ENST00000269318 NQO1P15559 274 aaKnown RBP16.7■□□□□ 0.26
CCDC40-201ENST00000269318 PSMA3P25788 255 aa16.7■□□□□ 0.26
CCDC40-201ENST00000269318 CDC25CP30307 473 aa16.7■□□□□ 0.26
CCDC40-201ENST00000269318 LBX1P52954 281 aa16.7■□□□□ 0.26
CCDC40-201ENST00000269318 LRRC8EQ6NSJ5 796 aa16.7■□□□□ 0.26
CCDC40-201ENST00000269318 TBC1D1Q86TI0 1168 aaPredicted RBP16.7■□□□□ 0.26
CCDC40-201ENST00000269318 LDB1Q86U70 411 aaPredicted RBP16.7■□□□□ 0.26
CCDC40-201ENST00000269318 CPXM2Q8N436 756 aa16.7■□□□□ 0.26
CCDC40-201ENST00000269318 FSTL5Q8N475 847 aaPredicted RBP16.7■□□□□ 0.26
CCDC40-201ENST00000269318 NXNL1Q96CM4 212 aa16.7■□□□□ 0.26
CCDC40-201ENST00000269318 TSNARE1Q96NA8 513 aa16.7■□□□□ 0.26
CCDC40-201ENST00000269318 RAD9AQ99638 391 aa16.7■□□□□ 0.26
CCDC40-201ENST00000269318 WWP1Q9H0M0 922 aa16.7■□□□□ 0.26
CCDC40-201ENST00000269318 VPS51Q9UID3 782 aa16.7■□□□□ 0.26
CCDC40-201ENST00000269318 VPS28Q9UK41 221 aa16.7■□□□□ 0.26
CCDC40-201ENST00000269318 LZTS1Q9Y250 596 aa16.7■□□□□ 0.26
CCDC40-201ENST00000269318 RAI2Q9Y5P3 530 aa16.7■□□□□ 0.26
CCDC40-201ENST00000269318 CBX6O95503 412 aa16.69■□□□□ 0.26
CCDC40-201ENST00000269318 GJA1P17302 382 aa16.69■□□□□ 0.26
CCDC40-201ENST00000269318 GLRBP48167 497 aa16.69■□□□□ 0.26
CCDC40-201ENST00000269318 ZNF140P52738 457 aaPredicted RBP16.69■□□□□ 0.26
CCDC40-201ENST00000269318 CDH18Q13634 790 aa16.69■□□□□ 0.26
CCDC40-201ENST00000269318 FAM91A1Q658Y4 838 aa16.69■□□□□ 0.26
CCDC40-201ENST00000269318 NCEH1Q6PIU2 408 aa16.69■□□□□ 0.26
CCDC40-201ENST00000269318 ALYREFQ86V81 257 aaKnown RBP16.69■□□□□ 0.26
CCDC40-201ENST00000269318 BBS7Q8IWZ6 715 aa16.69■□□□□ 0.26
CCDC40-201ENST00000269318 KIF2BQ8N4N8 673 aa16.69■□□□□ 0.26
CCDC40-201ENST00000269318 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.69■□□□□ 0.26
CCDC40-201ENST00000269318 DCAF4L2Q8NA75 395 aa16.69■□□□□ 0.26
CCDC40-201ENST00000269318 SLC22A17Q8WUG5 538 aa16.69■□□□□ 0.26
CCDC40-201ENST00000269318 EMILIN2Q9BXX0 1053 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms