RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 VPS33AQ96AX1 596 aa16.9■□□□□ 0.3
SQLE-201ENST00000265896 FCRL2Q96LA5 508 aaPredicted RBP16.9■□□□□ 0.3
SQLE-201ENST00000265896 IGSF5Q9NSI5 407 aa16.9■□□□□ 0.3
SQLE-201ENST00000265896 EBF1Q9UH73 591 aa16.9■□□□□ 0.3
SQLE-201ENST00000265896 RAB26Q9ULW5 256 aa16.9■□□□□ 0.3
SQLE-201ENST00000265896 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.9■□□□□ 0.3
SQLE-201ENST00000265896 HEATR9A2RTY3 570 aa16.89■□□□□ 0.3
SQLE-201ENST00000265896 SUPT3HO75486 399 aa16.89■□□□□ 0.3
SQLE-201ENST00000265896 CDH2P19022 906 aaPredicted RBP16.89■□□□□ 0.3
SQLE-201ENST00000265896 IHHQ14623 411 aa16.89■□□□□ 0.3
SQLE-201ENST00000265896 LPCAT2Q7L5N7 544 aa16.89■□□□□ 0.3
SQLE-201ENST00000265896 SCN4BQ8IWT1 228 aa16.89■□□□□ 0.3
SQLE-201ENST00000265896 ADCY4Q8NFM4 1077 aa16.89■□□□□ 0.3
SQLE-201ENST00000265896 DNAJB14Q8TBM8 379 aa16.89■□□□□ 0.3
SQLE-201ENST00000265896 CYGBQ8WWM9 190 aa16.89■□□□□ 0.3
SQLE-201ENST00000265896 FBXL20Q96IG2 436 aa16.89■□□□□ 0.3
SQLE-201ENST00000265896 MCMBPQ9BTE3 642 aa16.89■□□□□ 0.3
SQLE-201ENST00000265896 RBM38Q9H0Z9 239 aaKnown RBP16.89■□□□□ 0.3
SQLE-201ENST00000265896 GLOD4Q9HC38 313 aa16.89■□□□□ 0.3
SQLE-201ENST00000265896 TIMM22Q9Y584 194 aa16.89■□□□□ 0.3
SQLE-201ENST00000265896 ALDOCP09972 364 aaKnown RBP16.89■□□□□ 0.29
SQLE-201ENST00000265896 LINC00032P0C843 101 aa16.89■□□□□ 0.29
SQLE-201ENST00000265896 OXTRP30559 389 aa16.89■□□□□ 0.29
SQLE-201ENST00000265896 RPL34P49207 117 aaKnown RBP16.89■□□□□ 0.29
SQLE-201ENST00000265896 WNT3AP56704 352 aa16.89■□□□□ 0.29
SQLE-201ENST00000265896 XIAPP98170 497 aa16.89■□□□□ 0.29
SQLE-201ENST00000265896 DSC2Q02487 901 aa16.89■□□□□ 0.29
SQLE-201ENST00000265896 PLCL1Q15111 1095 aa16.89■□□□□ 0.29
SQLE-201ENST00000265896 PABPC1LQ4VXU2 614 aaKnown RBP16.89■□□□□ 0.29
SQLE-201ENST00000265896 CHSY3Q70JA7 882 aa16.89■□□□□ 0.29
SQLE-201ENST00000265896 HDAC10Q969S8 669 aa16.89■□□□□ 0.29
SQLE-201ENST00000265896 KATNBL1Q9H079 304 aa16.89■□□□□ 0.29
SQLE-201ENST00000265896 RNF181Q9P0P0 153 aa16.89■□□□□ 0.29
SQLE-201ENST00000265896 CEPT1Q9Y6K0 416 aa16.89■□□□□ 0.29
SQLE-201ENST00000265896 TRMUO75648 421 aaKnown RBP16.89■□□□□ 0.29
SQLE-201ENST00000265896 ITGB1P05556 798 aa16.89■□□□□ 0.29
SQLE-201ENST00000265896 ARL1P40616 181 aaPredicted RBP16.89■□□□□ 0.29
SQLE-201ENST00000265896 TIGD5Q53EQ6 642 aa16.89■□□□□ 0.29
SQLE-201ENST00000265896 CYHR1Q6ZMK1 362 aa16.89■□□□□ 0.29
SQLE-201ENST00000265896 LRRTM3Q86VH5 581 aa16.89■□□□□ 0.29
SQLE-201ENST00000265896 CLVS1Q8IUQ0 354 aaPredicted RBP16.89■□□□□ 0.29
SQLE-201ENST00000265896 ARHGAP12Q8IWW6 846 aa16.89■□□□□ 0.29
SQLE-201ENST00000265896 MRPS26Q9BYN8 205 aaKnown RBP16.89■□□□□ 0.29
SQLE-201ENST00000265896 CDC14AQ9UNH5 594 aa16.89■□□□□ 0.29
SQLE-201ENST00000265896 TRAF6Q9Y4K3 522 aa16.89■□□□□ 0.29
SQLE-201ENST00000265896 CXCL11O14625 94 aa16.88■□□□□ 0.29
SQLE-201ENST00000265896 TBX18O95935 607 aa16.88■□□□□ 0.29
SQLE-201ENST00000265896 CCL14Q16627 93 aa16.88■□□□□ 0.29
SQLE-201ENST00000265896 PFKFB4Q16877 469 aa16.88■□□□□ 0.29
SQLE-201ENST00000265896 DUSP28Q4G0W2 176 aa16.88■□□□□ 0.29
SQLE-201ENST00000265896 BHLHA9Q7RTU4 235 aa16.88■□□□□ 0.29
SQLE-201ENST00000265896 DRAXINQ8NBI3 349 aaPredicted RBP16.88■□□□□ 0.29
SQLE-201ENST00000265896 CASP10Q92851 521 aa16.88■□□□□ 0.29
SQLE-201ENST00000265896 MRGPRX2Q96LB1 330 aa16.88■□□□□ 0.29
SQLE-201ENST00000265896 MUC3BQ9H195 1237 aa16.88■□□□□ 0.29
SQLE-201ENST00000265896 TRHDEQ9UKU6 1024 aa16.88■□□□□ 0.29
SQLE-201ENST00000265896 TCAF1Q9Y4C2 921 aa16.88■□□□□ 0.29
SQLE-201ENST00000265896 RNF103-CHMP3A0A140T963 221 aa16.88■□□□□ 0.29
SQLE-201ENST00000265896 ERI2A8K979 691 aaKnown RBP16.88■□□□□ 0.29
SQLE-201ENST00000265896 MAFKO60675 156 aa16.88■□□□□ 0.29
SQLE-201ENST00000265896 ATP5F1P24539 256 aaPredicted RBP16.88■□□□□ 0.29
SQLE-201ENST00000265896 LRP8Q14114 963 aa16.88■□□□□ 0.29
SQLE-201ENST00000265896 ANKDD1AQ495B1 522 aa16.88■□□□□ 0.29
SQLE-201ENST00000265896 CPSF7Q8N684 471 aaKnown RBP16.88■□□□□ 0.29
SQLE-201ENST00000265896 ASB9Q96DX5 294 aa16.88■□□□□ 0.29
SQLE-201ENST00000265896 SLC10A4Q96EP9 437 aa16.88■□□□□ 0.29
SQLE-201ENST00000265896 MAML3Q96JK9 1138 aa16.88■□□□□ 0.29
SQLE-201ENST00000265896 PTTG2Q9NZH5 202 aa16.88■□□□□ 0.29
SQLE-201ENST00000265896 SLAMF8Q9P0V8 285 aa16.88■□□□□ 0.29
SQLE-201ENST00000265896 MAGEB16A2A368 324 aa16.87■□□□□ 0.29
SQLE-201ENST00000265896 UBXN8O00124 270 aa16.87■□□□□ 0.29
SQLE-201ENST00000265896 B4GAT1O43505 415 aa16.87■□□□□ 0.29
SQLE-201ENST00000265896 IPO13O94829 963 aaKnown RBP16.87■□□□□ 0.29
SQLE-201ENST00000265896 SNRPB2P08579 225 aaKnown RBP16.87■□□□□ 0.29
SQLE-201ENST00000265896 SLC10A7Q0GE19 358 aa16.87■□□□□ 0.29
SQLE-201ENST00000265896 RABL3Q5HYI8 236 aa16.87■□□□□ 0.29
SQLE-201ENST00000265896 C6orf10Q5SRN2 563 aa16.87■□□□□ 0.29
SQLE-201ENST00000265896 ZFP1Q6P2D0 407 aa16.87■□□□□ 0.29
SQLE-201ENST00000265896 FUNDC1Q8IVP5 155 aa16.87■□□□□ 0.29
SQLE-201ENST00000265896 BLOC1S5Q8TDH9 187 aa16.87■□□□□ 0.29
SQLE-201ENST00000265896 TRPC4APQ8TEL6 797 aa16.87■□□□□ 0.29
SQLE-201ENST00000265896 SEPHS2Q99611 448 aa16.87■□□□□ 0.29
SQLE-201ENST00000265896 SPAG4Q9NPE6 437 aa16.87■□□□□ 0.29
SQLE-201ENST00000265896 FAM50BQ9Y247 325 aa16.87■□□□□ 0.29
SQLE-201ENST00000265896 DERAQ9Y315 318 aa16.87■□□□□ 0.29
SQLE-201ENST00000265896 STAMBPO95630 424 aa16.87■□□□□ 0.29
SQLE-201ENST00000265896 HAPLN1P10915 354 aaPredicted RBP16.87■□□□□ 0.29
SQLE-201ENST00000265896 WARSP23381 471 aaKnown RBP16.87■□□□□ 0.29
SQLE-201ENST00000265896 CCR1P32246 355 aa16.87■□□□□ 0.29
SQLE-201ENST00000265896 HPCAP84074 193 aa16.87■□□□□ 0.29
SQLE-201ENST00000265896 PPP1R8Q12972 351 aaKnown RBP16.87■□□□□ 0.29
SQLE-201ENST00000265896 PTPRRQ15256 657 aa16.87■□□□□ 0.29
SQLE-201ENST00000265896 GPR142Q7Z601 462 aa16.87■□□□□ 0.29
SQLE-201ENST00000265896 AHI1Q8N157 1196 aa16.87■□□□□ 0.29
SQLE-201ENST00000265896 PTERQ96BW5 349 aa16.87■□□□□ 0.29
SQLE-201ENST00000265896 MRPL57Q9BQC6 102 aaKnown RBP16.87■□□□□ 0.29
SQLE-201ENST00000265896 TINF2Q9BSI4 451 aa16.87■□□□□ 0.29
SQLE-201ENST00000265896 AKTIPQ9H8T0 292 aa16.87■□□□□ 0.29
SQLE-201ENST00000265896 VTA1Q9NP79 307 aa16.87■□□□□ 0.29
SQLE-201ENST00000265896 SEMA4BQ9NPR2 832 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms