RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 C12orf50Q8NA57 414 aaPredicted RBP7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 ARRDC2Q8TBH0 407 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 CCDC110Q8TBZ0 833 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 HTR3CQ8WXA8 447 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 MS4A14Q96JA4 679 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 CALR3Q96L12 384 aaKnown RBP7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 IL12RB2Q99665 862 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 ORAI3Q9BRQ5 295 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 TMEM121Q9BTD3 319 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 EDEM2Q9BV94 578 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 TM9SF3Q9HD45 589 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 DNPEPQ9ULA0 475 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 FREM2Q5SZK8 3169 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 TPRP12270 2363 aaKnown RBP7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 GOLGA6L9A6NEM1 432 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 NPIPB15A6NHN6 443 aaPredicted RBP7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 PCNX2A6NKB5 2137 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 KIF5CO60282 957 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 CPP00450 1065 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 MMP2P08253 660 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 SERPINF2P08697 491 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 CD68P34810 354 aaPredicted RBP7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 MMP12P39900 470 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 NR2C2P49116 596 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 TERF1P54274 439 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 EPHB1P54762 984 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 IFI35P80217 286 aaPredicted RBP7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 IL9RQ01113 521 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 ZNF662Q6ZS27 426 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 HORMAD1Q86X24 394 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 SLC13A5Q86YT5 568 aaPredicted RBP7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 LRRC49Q8IUZ0 686 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 PLPP6Q8IY26 295 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 FAM71DQ8N9W8 422 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 CADM4Q8NFZ8 388 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 LRIG1Q96JA1 1093 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 WDR24Q96S15 920 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 APOL2Q9BQE5 337 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 TDRD1Q9BXT4 1180 aaKnown RBP7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 CPEB1Q9BZB8 566 aaKnown RBP7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 B4GALT6Q9UBX8 382 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 ATP8A1Q9Y2Q0 1164 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 CXorf51AA0A1B0GTR3 108 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 A0A1W2PPC4 97 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 GOLGA6CA6NDK9 693 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 GOLGA6BA6NDN3 693 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 AREL1O15033 823 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 SCAMP1O15126 338 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 ZNF185O15231 689 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 FANCGO15287 622 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 IFNB1P01574 187 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 WNT1P04628 370 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 GOLGA6DP0CG33 693 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 C6P13671 934 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 ENGP17813 658 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 LHCGRP22888 699 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 PSMB4P28070 264 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 PTPN7P35236 360 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 HSPA9P38646 679 aaKnown RBP7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 CHRNA4P43681 627 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 GNG11P61952 73 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 NSUN2Q08J23 767 aaKnown RBP eCLIP7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 SFSWAPQ12872 951 aaKnown RBP7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 GRIK2Q13002 908 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 ZNF284Q2VY69 593 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 UAP1L1Q3KQV9 507 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 TEX44Q53QW1 395 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 PLA2G2CQ5R387 149 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 ARMC12Q5T9G4 340 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 PID1Q7Z2X4 250 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 PTAR1Q7Z6K3 402 aaPredicted RBP7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 PRPF39Q86UA1 669 aaKnown RBP7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 IPMKQ8NFU5 416 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 CXorf40AQ8TE69 158 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 COG1Q8WTW3 980 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 FAM131CQ96AQ9 280 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 ECHDC3Q96DC8 303 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 OXNAD1Q96HP4 312 aaPredicted RBP7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 TUBGCP5Q96RT8 1024 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 CARD9Q9H257 536 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 IL21RQ9HBE5 538 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 PREBQ9HCU5 417 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 VPS45Q9NRW7 570 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 GOLGA6AQ9NYA3 693 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 CD84Q9UIB8 345 aa7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 FNDC3AQ9Y2H6 1198 aaKnown RBP7.29□□□□□ -1.24
DEPDC1B-201ENST00000265036 POM121BA6NF01 834 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 RIOK3O14730 519 aaKnown RBP7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 KHNYNO15037 678 aaKnown RBP7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 SLC7A4O43246 635 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 LATO43561 262 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 USP12O75317 370 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 PGLSO95336 258 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 ELFN1P0C7U0 828 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 C7P10643 843 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 GNSP15586 552 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 CD27P26842 260 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 LIG3P49916 1009 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 BNC1Q01954 994 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 TMEM259Q4ZIN3 620 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms